Computer aided diagnosis of pulmonary hamartoma from CT scan images using ant colony optimization based feature selection

Background: Computer-aided diagnosis (CAD) systems for the detection of lung disorders play an important role in clinical decision making. CAD systems provide a second opinion to the physician in interpreting computed tomography (CT) images. In this work, a CAD system to diagnose pulmonary hamartoma...

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Main Authors: J. Dhalia Sweetlin, H. Khanna Nehemiah, A. Kannan
Format: Article
Language:English
Published: Elsevier 2018-09-01
Series:Alexandria Engineering Journal
Online Access:http://www.sciencedirect.com/science/article/pii/S1110016817301576
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spelling doaj-364fa919efd04677bc4852cbfa22dbf42021-06-02T09:27:40ZengElsevierAlexandria Engineering Journal1110-01682018-09-0157315571567Computer aided diagnosis of pulmonary hamartoma from CT scan images using ant colony optimization based feature selectionJ. Dhalia Sweetlin0H. Khanna Nehemiah1A. Kannan2Ramanujan Computing Centre, Anna University, Chennai 600025, Tamil Nadu, IndiaRamanujan Computing Centre, Anna University, Chennai 600025, Tamil Nadu, India; Corresponding author.Department of Information Science and Technology, Anna University, Chennai 600025, Tamil Nadu, IndiaBackground: Computer-aided diagnosis (CAD) systems for the detection of lung disorders play an important role in clinical decision making. CAD systems provide a second opinion to the physician in interpreting computed tomography (CT) images. In this work, a CAD system to diagnose pulmonary hamartoma nodules from chest CT images is proposed. Methods: Segmentation of lung parenchyma from CT images is carried out using Otsu’s thresholding method. Nodules are considered to be the region of interests (ROIs) in this work. Texture, shape and run length based features are extracted from the ROIs. Cosine similarity measure (CSM) and rough dependency measure (RDM) are used independently as filter evaluation functions with ant colony optimization (ACO) to select two subsets of features. The selected subsets are used to train two classifiers namely support vector machine (SVM) and Naive Bayes (NB) classifiers using 10-fold cross validation. All the four trained classifiers are tested and the performance measures are estimated. Results: CT slices of patients affected with pulmonary cancer and hamartoma are used for experimentation. From the lung parenchymal tissues of 300 CT slices, 390 nodules are extracted. The feature selection algorithms, ACO-CSM and ACO-RDM are run for different feature subset sizes. The selected features are used to train SVM and NB classifiers. From the results obtained, it is inferred that SVM classifier with the feature subsets chosen by ACO-RDM feature selection approach yielded a maximum classification accuracy of 94.36% with 38 features. Conclusion: From the results, it can be clearly inferred that selecting relevant features to train the classifier has a definite impact on the performance of the classifier. Keywords: Computer aided diagnosis, Pulmonary hamartoma, Ant colony optimization, Cosine similarity, Rough dependency, Support vector machinehttp://www.sciencedirect.com/science/article/pii/S1110016817301576
collection DOAJ
language English
format Article
sources DOAJ
author J. Dhalia Sweetlin
H. Khanna Nehemiah
A. Kannan
spellingShingle J. Dhalia Sweetlin
H. Khanna Nehemiah
A. Kannan
Computer aided diagnosis of pulmonary hamartoma from CT scan images using ant colony optimization based feature selection
Alexandria Engineering Journal
author_facet J. Dhalia Sweetlin
H. Khanna Nehemiah
A. Kannan
author_sort J. Dhalia Sweetlin
title Computer aided diagnosis of pulmonary hamartoma from CT scan images using ant colony optimization based feature selection
title_short Computer aided diagnosis of pulmonary hamartoma from CT scan images using ant colony optimization based feature selection
title_full Computer aided diagnosis of pulmonary hamartoma from CT scan images using ant colony optimization based feature selection
title_fullStr Computer aided diagnosis of pulmonary hamartoma from CT scan images using ant colony optimization based feature selection
title_full_unstemmed Computer aided diagnosis of pulmonary hamartoma from CT scan images using ant colony optimization based feature selection
title_sort computer aided diagnosis of pulmonary hamartoma from ct scan images using ant colony optimization based feature selection
publisher Elsevier
series Alexandria Engineering Journal
issn 1110-0168
publishDate 2018-09-01
description Background: Computer-aided diagnosis (CAD) systems for the detection of lung disorders play an important role in clinical decision making. CAD systems provide a second opinion to the physician in interpreting computed tomography (CT) images. In this work, a CAD system to diagnose pulmonary hamartoma nodules from chest CT images is proposed. Methods: Segmentation of lung parenchyma from CT images is carried out using Otsu’s thresholding method. Nodules are considered to be the region of interests (ROIs) in this work. Texture, shape and run length based features are extracted from the ROIs. Cosine similarity measure (CSM) and rough dependency measure (RDM) are used independently as filter evaluation functions with ant colony optimization (ACO) to select two subsets of features. The selected subsets are used to train two classifiers namely support vector machine (SVM) and Naive Bayes (NB) classifiers using 10-fold cross validation. All the four trained classifiers are tested and the performance measures are estimated. Results: CT slices of patients affected with pulmonary cancer and hamartoma are used for experimentation. From the lung parenchymal tissues of 300 CT slices, 390 nodules are extracted. The feature selection algorithms, ACO-CSM and ACO-RDM are run for different feature subset sizes. The selected features are used to train SVM and NB classifiers. From the results obtained, it is inferred that SVM classifier with the feature subsets chosen by ACO-RDM feature selection approach yielded a maximum classification accuracy of 94.36% with 38 features. Conclusion: From the results, it can be clearly inferred that selecting relevant features to train the classifier has a definite impact on the performance of the classifier. Keywords: Computer aided diagnosis, Pulmonary hamartoma, Ant colony optimization, Cosine similarity, Rough dependency, Support vector machine
url http://www.sciencedirect.com/science/article/pii/S1110016817301576
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AT akannan computeraideddiagnosisofpulmonaryhamartomafromctscanimagesusingantcolonyoptimizationbasedfeatureselection
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