Discovering Health Benefits of Phytochemicals with Integrated Analysis of the Molecular Network, Chemical Properties and Ethnopharmacological Evidence

Identifying the health benefits of phytochemicals is an essential step in drug and functional food development. While many in vitro screening methods have been developed to identify the health effects of phytochemicals, there is still room for improvement because of high cost and low productivity. T...

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Main Authors: Sunyong Yoo, Kwansoo Kim, Hojung Nam, Doheon Lee
Format: Article
Language:English
Published: MDPI AG 2018-08-01
Series:Nutrients
Subjects:
Online Access:http://www.mdpi.com/2072-6643/10/8/1042
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spelling doaj-35c7c0fa41ba499696c5d5083d7367062020-11-25T00:13:23ZengMDPI AGNutrients2072-66432018-08-01108104210.3390/nu10081042nu10081042Discovering Health Benefits of Phytochemicals with Integrated Analysis of the Molecular Network, Chemical Properties and Ethnopharmacological EvidenceSunyong Yoo0Kwansoo Kim1Hojung Nam2Doheon Lee3Department of Bio and Brain Engineering, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, KoreaDepartment of Bio and Brain Engineering, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, KoreaSchool of Electrical Engineering and Computer Science, Gwangju Institute of Science and Technology (GIST), Gwangju 61005, KoreaDepartment of Bio and Brain Engineering, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, KoreaIdentifying the health benefits of phytochemicals is an essential step in drug and functional food development. While many in vitro screening methods have been developed to identify the health effects of phytochemicals, there is still room for improvement because of high cost and low productivity. Therefore, researchers have alternatively proposed in silico methods, primarily based on three types of approaches; utilizing molecular, chemical or ethnopharmacological information. Although each approach has its own strength in analyzing the characteristics of phytochemicals, previous studies have not considered them all together. Here, we apply an integrated in silico analysis to identify the potential health benefits of phytochemicals based on molecular analysis and chemical properties as well as ethnopharmacological evidence. From the molecular analysis, we found an average of 415.6 health effects for 591 phytochemicals. We further investigated ethnopharmacological evidence of phytochemicals and found that on average 129.1 (31%) of the predicted health effects had ethnopharmacological evidence. Lastly, we investigated chemical properties to confirm whether they are orally bio-available, drug available or effective on certain tissues. The evaluation results indicate that the health effects can be predicted more accurately by cooperatively considering the molecular analysis, chemical properties and ethnopharmacological evidence.http://www.mdpi.com/2072-6643/10/8/1042phytochemicalhealth benefitsnetwork medicinemolecular analysisethnopharmacologyherbal medicinechemical property
collection DOAJ
language English
format Article
sources DOAJ
author Sunyong Yoo
Kwansoo Kim
Hojung Nam
Doheon Lee
spellingShingle Sunyong Yoo
Kwansoo Kim
Hojung Nam
Doheon Lee
Discovering Health Benefits of Phytochemicals with Integrated Analysis of the Molecular Network, Chemical Properties and Ethnopharmacological Evidence
Nutrients
phytochemical
health benefits
network medicine
molecular analysis
ethnopharmacology
herbal medicine
chemical property
author_facet Sunyong Yoo
Kwansoo Kim
Hojung Nam
Doheon Lee
author_sort Sunyong Yoo
title Discovering Health Benefits of Phytochemicals with Integrated Analysis of the Molecular Network, Chemical Properties and Ethnopharmacological Evidence
title_short Discovering Health Benefits of Phytochemicals with Integrated Analysis of the Molecular Network, Chemical Properties and Ethnopharmacological Evidence
title_full Discovering Health Benefits of Phytochemicals with Integrated Analysis of the Molecular Network, Chemical Properties and Ethnopharmacological Evidence
title_fullStr Discovering Health Benefits of Phytochemicals with Integrated Analysis of the Molecular Network, Chemical Properties and Ethnopharmacological Evidence
title_full_unstemmed Discovering Health Benefits of Phytochemicals with Integrated Analysis of the Molecular Network, Chemical Properties and Ethnopharmacological Evidence
title_sort discovering health benefits of phytochemicals with integrated analysis of the molecular network, chemical properties and ethnopharmacological evidence
publisher MDPI AG
series Nutrients
issn 2072-6643
publishDate 2018-08-01
description Identifying the health benefits of phytochemicals is an essential step in drug and functional food development. While many in vitro screening methods have been developed to identify the health effects of phytochemicals, there is still room for improvement because of high cost and low productivity. Therefore, researchers have alternatively proposed in silico methods, primarily based on three types of approaches; utilizing molecular, chemical or ethnopharmacological information. Although each approach has its own strength in analyzing the characteristics of phytochemicals, previous studies have not considered them all together. Here, we apply an integrated in silico analysis to identify the potential health benefits of phytochemicals based on molecular analysis and chemical properties as well as ethnopharmacological evidence. From the molecular analysis, we found an average of 415.6 health effects for 591 phytochemicals. We further investigated ethnopharmacological evidence of phytochemicals and found that on average 129.1 (31%) of the predicted health effects had ethnopharmacological evidence. Lastly, we investigated chemical properties to confirm whether they are orally bio-available, drug available or effective on certain tissues. The evaluation results indicate that the health effects can be predicted more accurately by cooperatively considering the molecular analysis, chemical properties and ethnopharmacological evidence.
topic phytochemical
health benefits
network medicine
molecular analysis
ethnopharmacology
herbal medicine
chemical property
url http://www.mdpi.com/2072-6643/10/8/1042
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AT kwansookim discoveringhealthbenefitsofphytochemicalswithintegratedanalysisofthemolecularnetworkchemicalpropertiesandethnopharmacologicalevidence
AT hojungnam discoveringhealthbenefitsofphytochemicalswithintegratedanalysisofthemolecularnetworkchemicalpropertiesandethnopharmacologicalevidence
AT doheonlee discoveringhealthbenefitsofphytochemicalswithintegratedanalysisofthemolecularnetworkchemicalpropertiesandethnopharmacologicalevidence
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