Application of Genome Editing in Tomato Breeding: Mechanisms, Advances, and Prospects

Plants regularly face the changing climatic conditions that cause biotic and abiotic stress responses. The abiotic stresses are the primary constraints affecting crop yield and nutritional quality in many crop plants. The advances in genome sequencing and high-throughput approaches have enabled the...

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Main Authors: Hymavathi Salava, Sravankumar Thula, Vijee Mohan, Rahul Kumar, Fatemeh Maghuly
Format: Article
Language:English
Published: MDPI AG 2021-01-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:https://www.mdpi.com/1422-0067/22/2/682
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spelling doaj-356b12a4dfc94a4396f212f6305b8a292021-01-13T00:02:29ZengMDPI AGInternational Journal of Molecular Sciences1661-65961422-00672021-01-012268268210.3390/ijms22020682Application of Genome Editing in Tomato Breeding: Mechanisms, Advances, and ProspectsHymavathi Salava0Sravankumar Thula1Vijee Mohan2Rahul Kumar3Fatemeh Maghuly4Department of Plant Sciences, University of Hyderabad, Hyderabad 500064, IndiaMendel Centre for Plant Genomics and Proteomics, Central European Institute of Technology (CEITEC), Masaryk University, Kamenice 5, CZ-625 00 Brno, Czech RepublicDepartment of Biological Sciences, University of North Texas, Denton, TX 76203, USAPlant Translational Research Laboratory, Department of Plant Sciences, University of Hyderabad, Hyderabad 500064, IndiaPlant Functional Genomics, Institute of Molecular Biotechnology, Department of Biotechnology, BOKU-VIBT, University of Natural Resources and Life Sciences, 1190 Vienna, AustriaPlants regularly face the changing climatic conditions that cause biotic and abiotic stress responses. The abiotic stresses are the primary constraints affecting crop yield and nutritional quality in many crop plants. The advances in genome sequencing and high-throughput approaches have enabled the researchers to use genome editing tools for the functional characterization of many genes useful for crop improvement. The present review focuses on the genome editing tools for improving many traits such as disease resistance, abiotic stress tolerance, yield, quality, and nutritional aspects of tomato. Many candidate genes conferring tolerance to abiotic stresses such as heat, cold, drought, and salinity stress have been successfully manipulated by gene modification and editing techniques such as RNA interference, insertional mutagenesis, and clustered regularly interspaced short palindromic repeat (CRISPR/Cas9). In this regard, the genome editing tools such as CRISPR/Cas9, which is a fast and efficient technology that can be exploited to explore the genetic resources for the improvement of tomato and other crop plants in terms of stress tolerance and nutritional quality. The review presents examples of gene editing responsible for conferring both biotic and abiotic stresses in tomato simultaneously. The literature on using this powerful technology to improve fruit quality, yield, and nutritional aspects in tomato is highlighted. Finally, the prospects and challenges of genome editing, public and political acceptance in tomato are discussed.https://www.mdpi.com/1422-0067/22/2/682trait improvementgene knockoutresistance breedingbiotic stressabiotic stress
collection DOAJ
language English
format Article
sources DOAJ
author Hymavathi Salava
Sravankumar Thula
Vijee Mohan
Rahul Kumar
Fatemeh Maghuly
spellingShingle Hymavathi Salava
Sravankumar Thula
Vijee Mohan
Rahul Kumar
Fatemeh Maghuly
Application of Genome Editing in Tomato Breeding: Mechanisms, Advances, and Prospects
International Journal of Molecular Sciences
trait improvement
gene knockout
resistance breeding
biotic stress
abiotic stress
author_facet Hymavathi Salava
Sravankumar Thula
Vijee Mohan
Rahul Kumar
Fatemeh Maghuly
author_sort Hymavathi Salava
title Application of Genome Editing in Tomato Breeding: Mechanisms, Advances, and Prospects
title_short Application of Genome Editing in Tomato Breeding: Mechanisms, Advances, and Prospects
title_full Application of Genome Editing in Tomato Breeding: Mechanisms, Advances, and Prospects
title_fullStr Application of Genome Editing in Tomato Breeding: Mechanisms, Advances, and Prospects
title_full_unstemmed Application of Genome Editing in Tomato Breeding: Mechanisms, Advances, and Prospects
title_sort application of genome editing in tomato breeding: mechanisms, advances, and prospects
publisher MDPI AG
series International Journal of Molecular Sciences
issn 1661-6596
1422-0067
publishDate 2021-01-01
description Plants regularly face the changing climatic conditions that cause biotic and abiotic stress responses. The abiotic stresses are the primary constraints affecting crop yield and nutritional quality in many crop plants. The advances in genome sequencing and high-throughput approaches have enabled the researchers to use genome editing tools for the functional characterization of many genes useful for crop improvement. The present review focuses on the genome editing tools for improving many traits such as disease resistance, abiotic stress tolerance, yield, quality, and nutritional aspects of tomato. Many candidate genes conferring tolerance to abiotic stresses such as heat, cold, drought, and salinity stress have been successfully manipulated by gene modification and editing techniques such as RNA interference, insertional mutagenesis, and clustered regularly interspaced short palindromic repeat (CRISPR/Cas9). In this regard, the genome editing tools such as CRISPR/Cas9, which is a fast and efficient technology that can be exploited to explore the genetic resources for the improvement of tomato and other crop plants in terms of stress tolerance and nutritional quality. The review presents examples of gene editing responsible for conferring both biotic and abiotic stresses in tomato simultaneously. The literature on using this powerful technology to improve fruit quality, yield, and nutritional aspects in tomato is highlighted. Finally, the prospects and challenges of genome editing, public and political acceptance in tomato are discussed.
topic trait improvement
gene knockout
resistance breeding
biotic stress
abiotic stress
url https://www.mdpi.com/1422-0067/22/2/682
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