Sensitivitas Metode Serologi dan Polymerase Chain Reaction untuk Mendeteksi Bean Common Mosaic Potyvirus pada Kacang Panjang

<p>Mosaic disease in yard long bean is caused by <em>Bean common mosaic potyvirus </em>(BCMV) and has been reported to affect yield. Common method to detect infection of BCMV involves serological assay and <em>polymerase chain reaction </em>(PCR). The aims of this resea...

Full description

Bibliographic Details
Main Authors: Sherli Anggraini, Sri Hendrastuti Hidayat
Format: Article
Language:Indonesian
Published: Perhimpunan Fitopatologi Indonesia 2014-08-01
Series:Jurnal Fitopatologi Indonesia
Subjects:
Online Access:http://journal.ipb.ac.id/index.php/jfiti/article/view/8518
id doaj-35526214feaf4ed0ac961caaf15bb3a9
record_format Article
spelling doaj-35526214feaf4ed0ac961caaf15bb3a92020-11-25T00:23:55ZindPerhimpunan Fitopatologi IndonesiaJurnal Fitopatologi Indonesia0215-79502339-24792014-08-0110110.14692/jfi.10.1.177204Sensitivitas Metode Serologi dan Polymerase Chain Reaction untuk Mendeteksi Bean Common Mosaic Potyvirus pada Kacang PanjangSherli Anggraini0Sri Hendrastuti Hidayat1Institut Pertanian BogorInstitut Pertanian Bogor<p>Mosaic disease in yard long bean is caused by <em>Bean common mosaic potyvirus </em>(BCMV) and has been reported to affect yield. Common method to detect infection of BCMV involves serological assay and <em>polymerase chain reaction </em>(PCR). The aims of this research is to assess the sensitivity of three methods, i.e. <em>Indirect Enzym-Linked Immunosorbent Assay </em>(I-ELISA), <em>Dot Immunobinding Assay </em>(DIBA), and <em>reverse transcription </em>(RT)-PCR as detection method for BCMV infection in yard long bean. Sensitivity level of the methods was evaluated by diluting plant extract and antisera for I-ELISA and DIBA, and cDNA as template in RT-PCR. Virus isolate from Cirebon was maintained in yard long bean in screenhouse and used for the assessment. Absorbance value of ELISA showed that dilution end point for I-ELISA was reached at 10<sup>-3</sup> and 10<sup>-2</sup> of plant extract and antisera dilution, respectively. Positive infection was still detected using DIBA when the plant extract was diluted up to 10<sup>-5</sup> based on development of color intensity on nitrocellulose membrane. Specific viral DNA fragment was still amplified when cDNA was diluted up to 10<sup>-4</sup>, indicated higher sensitivity level of RT-PCR method.</p>http://journal.ipb.ac.id/index.php/jfiti/article/view/8518enzym-linked immunosorbent assay, dot immunobinding assay, reverse transcription-polymerase chain reaction
collection DOAJ
language Indonesian
format Article
sources DOAJ
author Sherli Anggraini
Sri Hendrastuti Hidayat
spellingShingle Sherli Anggraini
Sri Hendrastuti Hidayat
Sensitivitas Metode Serologi dan Polymerase Chain Reaction untuk Mendeteksi Bean Common Mosaic Potyvirus pada Kacang Panjang
Jurnal Fitopatologi Indonesia
enzym-linked immunosorbent assay, dot immunobinding assay, reverse transcription-polymerase chain reaction
author_facet Sherli Anggraini
Sri Hendrastuti Hidayat
author_sort Sherli Anggraini
title Sensitivitas Metode Serologi dan Polymerase Chain Reaction untuk Mendeteksi Bean Common Mosaic Potyvirus pada Kacang Panjang
title_short Sensitivitas Metode Serologi dan Polymerase Chain Reaction untuk Mendeteksi Bean Common Mosaic Potyvirus pada Kacang Panjang
title_full Sensitivitas Metode Serologi dan Polymerase Chain Reaction untuk Mendeteksi Bean Common Mosaic Potyvirus pada Kacang Panjang
title_fullStr Sensitivitas Metode Serologi dan Polymerase Chain Reaction untuk Mendeteksi Bean Common Mosaic Potyvirus pada Kacang Panjang
title_full_unstemmed Sensitivitas Metode Serologi dan Polymerase Chain Reaction untuk Mendeteksi Bean Common Mosaic Potyvirus pada Kacang Panjang
title_sort sensitivitas metode serologi dan polymerase chain reaction untuk mendeteksi bean common mosaic potyvirus pada kacang panjang
publisher Perhimpunan Fitopatologi Indonesia
series Jurnal Fitopatologi Indonesia
issn 0215-7950
2339-2479
publishDate 2014-08-01
description <p>Mosaic disease in yard long bean is caused by <em>Bean common mosaic potyvirus </em>(BCMV) and has been reported to affect yield. Common method to detect infection of BCMV involves serological assay and <em>polymerase chain reaction </em>(PCR). The aims of this research is to assess the sensitivity of three methods, i.e. <em>Indirect Enzym-Linked Immunosorbent Assay </em>(I-ELISA), <em>Dot Immunobinding Assay </em>(DIBA), and <em>reverse transcription </em>(RT)-PCR as detection method for BCMV infection in yard long bean. Sensitivity level of the methods was evaluated by diluting plant extract and antisera for I-ELISA and DIBA, and cDNA as template in RT-PCR. Virus isolate from Cirebon was maintained in yard long bean in screenhouse and used for the assessment. Absorbance value of ELISA showed that dilution end point for I-ELISA was reached at 10<sup>-3</sup> and 10<sup>-2</sup> of plant extract and antisera dilution, respectively. Positive infection was still detected using DIBA when the plant extract was diluted up to 10<sup>-5</sup> based on development of color intensity on nitrocellulose membrane. Specific viral DNA fragment was still amplified when cDNA was diluted up to 10<sup>-4</sup>, indicated higher sensitivity level of RT-PCR method.</p>
topic enzym-linked immunosorbent assay, dot immunobinding assay, reverse transcription-polymerase chain reaction
url http://journal.ipb.ac.id/index.php/jfiti/article/view/8518
work_keys_str_mv AT sherlianggraini sensitivitasmetodeserologidanpolymerasechainreactionuntukmendeteksibeancommonmosaicpotyviruspadakacangpanjang
AT srihendrastutihidayat sensitivitasmetodeserologidanpolymerasechainreactionuntukmendeteksibeancommonmosaicpotyviruspadakacangpanjang
_version_ 1725354984735768576