Distinctive Regulation of Carbapenem Susceptibility in Pseudomonas aeruginosa by Hfq

Carbapenems are often the antibiotics of choice to combat life threatening infections caused by the opportunistic human pathogen Pseudomonas aeruginosa. The outer membrane porins OprD and OpdP serve as entry ports for carbapenems. Here, we report that the RNA chaperone Hfq governs post-transcription...

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Main Authors: Elisabeth Sonnleitner, Petra Pusic, Michael T. Wolfinger, Udo Bläsi
Format: Article
Language:English
Published: Frontiers Media S.A. 2020-05-01
Series:Frontiers in Microbiology
Subjects:
Online Access:https://www.frontiersin.org/article/10.3389/fmicb.2020.01001/full
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spelling doaj-35207a41cb49426f888b6b3ed4e7886c2020-11-25T03:18:55ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2020-05-011110.3389/fmicb.2020.01001545641Distinctive Regulation of Carbapenem Susceptibility in Pseudomonas aeruginosa by HfqElisabeth Sonnleitner0Petra Pusic1Michael T. Wolfinger2Michael T. Wolfinger3Udo Bläsi4Department of Microbiology, Immunobiology and Genetics, Max Perutz Labs, Vienna BioCenter (VBC), University of Vienna, Vienna, AustriaDepartment of Microbiology, Immunobiology and Genetics, Max Perutz Labs, Vienna BioCenter (VBC), University of Vienna, Vienna, AustriaDepartment of Theoretical Chemistry, Faculty of Chemistry, University of Vienna, Vienna, AustriaResearch Group Bioinformatics and Computational Biology, Faculty of Computer Science, University of Vienna, Vienna, AustriaDepartment of Microbiology, Immunobiology and Genetics, Max Perutz Labs, Vienna BioCenter (VBC), University of Vienna, Vienna, AustriaCarbapenems are often the antibiotics of choice to combat life threatening infections caused by the opportunistic human pathogen Pseudomonas aeruginosa. The outer membrane porins OprD and OpdP serve as entry ports for carbapenems. Here, we report that the RNA chaperone Hfq governs post-transcriptional regulation of the oprD and opdP genes in a distinctive manner. Hfq together with the recently described small regulatory RNAs (sRNAs) ErsA and Sr0161 is shown to mediate translational repression of oprD, whereas opdP appears not to be regulated by sRNAs. At variance, our data indicate that opdP is translationally repressed by a regulatory complex consisting of Hfq and the catabolite repression protein Crc, an assembly known to be key to carbon catabolite repression in P. aeruginosa. The regulatory RNA CrcZ, which is up-regulated during growth of P. aeruginosa on less preferred carbon sources, is known to sequester Hfq, which relieves Hfq-mediated translational repression of genes. The differential carbapenem susceptibility during growth on different carbon sources can thus be understood in light of Hfq-dependent oprD/opdP regulation and of the antagonizing function of the CrcZ RNA on Hfq regulatory complexes.https://www.frontiersin.org/article/10.3389/fmicb.2020.01001/fullPseudomonas aeruginosaopdPoprDcarbapenem resistanceriboregulationcatabolite repression
collection DOAJ
language English
format Article
sources DOAJ
author Elisabeth Sonnleitner
Petra Pusic
Michael T. Wolfinger
Michael T. Wolfinger
Udo Bläsi
spellingShingle Elisabeth Sonnleitner
Petra Pusic
Michael T. Wolfinger
Michael T. Wolfinger
Udo Bläsi
Distinctive Regulation of Carbapenem Susceptibility in Pseudomonas aeruginosa by Hfq
Frontiers in Microbiology
Pseudomonas aeruginosa
opdP
oprD
carbapenem resistance
riboregulation
catabolite repression
author_facet Elisabeth Sonnleitner
Petra Pusic
Michael T. Wolfinger
Michael T. Wolfinger
Udo Bläsi
author_sort Elisabeth Sonnleitner
title Distinctive Regulation of Carbapenem Susceptibility in Pseudomonas aeruginosa by Hfq
title_short Distinctive Regulation of Carbapenem Susceptibility in Pseudomonas aeruginosa by Hfq
title_full Distinctive Regulation of Carbapenem Susceptibility in Pseudomonas aeruginosa by Hfq
title_fullStr Distinctive Regulation of Carbapenem Susceptibility in Pseudomonas aeruginosa by Hfq
title_full_unstemmed Distinctive Regulation of Carbapenem Susceptibility in Pseudomonas aeruginosa by Hfq
title_sort distinctive regulation of carbapenem susceptibility in pseudomonas aeruginosa by hfq
publisher Frontiers Media S.A.
series Frontiers in Microbiology
issn 1664-302X
publishDate 2020-05-01
description Carbapenems are often the antibiotics of choice to combat life threatening infections caused by the opportunistic human pathogen Pseudomonas aeruginosa. The outer membrane porins OprD and OpdP serve as entry ports for carbapenems. Here, we report that the RNA chaperone Hfq governs post-transcriptional regulation of the oprD and opdP genes in a distinctive manner. Hfq together with the recently described small regulatory RNAs (sRNAs) ErsA and Sr0161 is shown to mediate translational repression of oprD, whereas opdP appears not to be regulated by sRNAs. At variance, our data indicate that opdP is translationally repressed by a regulatory complex consisting of Hfq and the catabolite repression protein Crc, an assembly known to be key to carbon catabolite repression in P. aeruginosa. The regulatory RNA CrcZ, which is up-regulated during growth of P. aeruginosa on less preferred carbon sources, is known to sequester Hfq, which relieves Hfq-mediated translational repression of genes. The differential carbapenem susceptibility during growth on different carbon sources can thus be understood in light of Hfq-dependent oprD/opdP regulation and of the antagonizing function of the CrcZ RNA on Hfq regulatory complexes.
topic Pseudomonas aeruginosa
opdP
oprD
carbapenem resistance
riboregulation
catabolite repression
url https://www.frontiersin.org/article/10.3389/fmicb.2020.01001/full
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