High-Throughput Platform for Optoacoustic Probing of Genetically Encoded Calcium Ion Indicators

Summary: Functional optoacoustic (OA) imaging assisted with genetically encoded calcium ion indicators (GECIs) holds promise for imaging large-scale neuronal activity at depths and spatiotemporal resolutions not attainable with existing optical microscopic techniques. However, currently available GE...

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Main Authors: Urs A.T. Hofmann, Arne Fabritius, Johannes Rebling, Héctor Estrada, X. Luís Deán-Ben, Oliver Griesbeck, Daniel Razansky
Format: Article
Language:English
Published: Elsevier 2019-12-01
Series:iScience
Online Access:http://www.sciencedirect.com/science/article/pii/S2589004219304845
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spelling doaj-34a64b186aae4ba3b5e1b4052f7a99612020-11-24T23:51:17ZengElsevieriScience2589-00422019-12-0122400408High-Throughput Platform for Optoacoustic Probing of Genetically Encoded Calcium Ion IndicatorsUrs A.T. Hofmann0Arne Fabritius1Johannes Rebling2Héctor Estrada3X. Luís Deán-Ben4Oliver Griesbeck5Daniel Razansky6Institute of Pharmacology and Toxicology and Faculty of Medicine, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland; Institute for Biomedical Engineering and Department of Information Technology and Electrical Engineering, ETH Zurich, Gloriastrasse 35, 8092 Zurich, SwitzerlandTools for Bio-Imaging, Max Planck Institute, Am Klopferspitz 18, 82152 Martinsried, GermanyInstitute of Pharmacology and Toxicology and Faculty of Medicine, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland; Institute for Biomedical Engineering and Department of Information Technology and Electrical Engineering, ETH Zurich, Gloriastrasse 35, 8092 Zurich, SwitzerlandInstitute of Pharmacology and Toxicology and Faculty of Medicine, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland; Institute for Biomedical Engineering and Department of Information Technology and Electrical Engineering, ETH Zurich, Gloriastrasse 35, 8092 Zurich, SwitzerlandInstitute of Pharmacology and Toxicology and Faculty of Medicine, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland; Institute for Biomedical Engineering and Department of Information Technology and Electrical Engineering, ETH Zurich, Gloriastrasse 35, 8092 Zurich, SwitzerlandTools for Bio-Imaging, Max Planck Institute, Am Klopferspitz 18, 82152 Martinsried, GermanyInstitute of Pharmacology and Toxicology and Faculty of Medicine, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland; Institute for Biomedical Engineering and Department of Information Technology and Electrical Engineering, ETH Zurich, Gloriastrasse 35, 8092 Zurich, Switzerland; Corresponding authorSummary: Functional optoacoustic (OA) imaging assisted with genetically encoded calcium ion indicators (GECIs) holds promise for imaging large-scale neuronal activity at depths and spatiotemporal resolutions not attainable with existing optical microscopic techniques. However, currently available GECIs optimized for fluorescence (FL) imaging lack sufficient contrast for OA imaging and respond at wavelengths having limited penetration into the mammalian brain. Here we present an imaging platform capable of rapid assessment and cross-validation between OA and FL responses of sensor proteins expressed in Escherichia coli colonies. The screening system features optimized pulsed light excitation combined with ultrasensitive ultrasound detection to mitigate photobleaching while further allowing the dynamic characterization of calcium ion responses with millisecond precision. Targeted probing of up to six individual colonies per second in both calcium-loaded and calcium-unloaded states was possible with the system. The new platform greatly facilitates optimization of absorption-based labels, thus setting the stage for directed evolution of OA GECIs. : Analytical Chemistry; Bioengineering; Biomaterials Subject Areas: Analytical Chemistry, Bioengineering, Biomaterialshttp://www.sciencedirect.com/science/article/pii/S2589004219304845
collection DOAJ
language English
format Article
sources DOAJ
author Urs A.T. Hofmann
Arne Fabritius
Johannes Rebling
Héctor Estrada
X. Luís Deán-Ben
Oliver Griesbeck
Daniel Razansky
spellingShingle Urs A.T. Hofmann
Arne Fabritius
Johannes Rebling
Héctor Estrada
X. Luís Deán-Ben
Oliver Griesbeck
Daniel Razansky
High-Throughput Platform for Optoacoustic Probing of Genetically Encoded Calcium Ion Indicators
iScience
author_facet Urs A.T. Hofmann
Arne Fabritius
Johannes Rebling
Héctor Estrada
X. Luís Deán-Ben
Oliver Griesbeck
Daniel Razansky
author_sort Urs A.T. Hofmann
title High-Throughput Platform for Optoacoustic Probing of Genetically Encoded Calcium Ion Indicators
title_short High-Throughput Platform for Optoacoustic Probing of Genetically Encoded Calcium Ion Indicators
title_full High-Throughput Platform for Optoacoustic Probing of Genetically Encoded Calcium Ion Indicators
title_fullStr High-Throughput Platform for Optoacoustic Probing of Genetically Encoded Calcium Ion Indicators
title_full_unstemmed High-Throughput Platform for Optoacoustic Probing of Genetically Encoded Calcium Ion Indicators
title_sort high-throughput platform for optoacoustic probing of genetically encoded calcium ion indicators
publisher Elsevier
series iScience
issn 2589-0042
publishDate 2019-12-01
description Summary: Functional optoacoustic (OA) imaging assisted with genetically encoded calcium ion indicators (GECIs) holds promise for imaging large-scale neuronal activity at depths and spatiotemporal resolutions not attainable with existing optical microscopic techniques. However, currently available GECIs optimized for fluorescence (FL) imaging lack sufficient contrast for OA imaging and respond at wavelengths having limited penetration into the mammalian brain. Here we present an imaging platform capable of rapid assessment and cross-validation between OA and FL responses of sensor proteins expressed in Escherichia coli colonies. The screening system features optimized pulsed light excitation combined with ultrasensitive ultrasound detection to mitigate photobleaching while further allowing the dynamic characterization of calcium ion responses with millisecond precision. Targeted probing of up to six individual colonies per second in both calcium-loaded and calcium-unloaded states was possible with the system. The new platform greatly facilitates optimization of absorption-based labels, thus setting the stage for directed evolution of OA GECIs. : Analytical Chemistry; Bioengineering; Biomaterials Subject Areas: Analytical Chemistry, Bioengineering, Biomaterials
url http://www.sciencedirect.com/science/article/pii/S2589004219304845
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