High-Throughput Platform for Optoacoustic Probing of Genetically Encoded Calcium Ion Indicators
Summary: Functional optoacoustic (OA) imaging assisted with genetically encoded calcium ion indicators (GECIs) holds promise for imaging large-scale neuronal activity at depths and spatiotemporal resolutions not attainable with existing optical microscopic techniques. However, currently available GE...
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doaj-34a64b186aae4ba3b5e1b4052f7a99612020-11-24T23:51:17ZengElsevieriScience2589-00422019-12-0122400408High-Throughput Platform for Optoacoustic Probing of Genetically Encoded Calcium Ion IndicatorsUrs A.T. Hofmann0Arne Fabritius1Johannes Rebling2Héctor Estrada3X. Luís Deán-Ben4Oliver Griesbeck5Daniel Razansky6Institute of Pharmacology and Toxicology and Faculty of Medicine, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland; Institute for Biomedical Engineering and Department of Information Technology and Electrical Engineering, ETH Zurich, Gloriastrasse 35, 8092 Zurich, SwitzerlandTools for Bio-Imaging, Max Planck Institute, Am Klopferspitz 18, 82152 Martinsried, GermanyInstitute of Pharmacology and Toxicology and Faculty of Medicine, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland; Institute for Biomedical Engineering and Department of Information Technology and Electrical Engineering, ETH Zurich, Gloriastrasse 35, 8092 Zurich, SwitzerlandInstitute of Pharmacology and Toxicology and Faculty of Medicine, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland; Institute for Biomedical Engineering and Department of Information Technology and Electrical Engineering, ETH Zurich, Gloriastrasse 35, 8092 Zurich, SwitzerlandInstitute of Pharmacology and Toxicology and Faculty of Medicine, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland; Institute for Biomedical Engineering and Department of Information Technology and Electrical Engineering, ETH Zurich, Gloriastrasse 35, 8092 Zurich, SwitzerlandTools for Bio-Imaging, Max Planck Institute, Am Klopferspitz 18, 82152 Martinsried, GermanyInstitute of Pharmacology and Toxicology and Faculty of Medicine, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland; Institute for Biomedical Engineering and Department of Information Technology and Electrical Engineering, ETH Zurich, Gloriastrasse 35, 8092 Zurich, Switzerland; Corresponding authorSummary: Functional optoacoustic (OA) imaging assisted with genetically encoded calcium ion indicators (GECIs) holds promise for imaging large-scale neuronal activity at depths and spatiotemporal resolutions not attainable with existing optical microscopic techniques. However, currently available GECIs optimized for fluorescence (FL) imaging lack sufficient contrast for OA imaging and respond at wavelengths having limited penetration into the mammalian brain. Here we present an imaging platform capable of rapid assessment and cross-validation between OA and FL responses of sensor proteins expressed in Escherichia coli colonies. The screening system features optimized pulsed light excitation combined with ultrasensitive ultrasound detection to mitigate photobleaching while further allowing the dynamic characterization of calcium ion responses with millisecond precision. Targeted probing of up to six individual colonies per second in both calcium-loaded and calcium-unloaded states was possible with the system. The new platform greatly facilitates optimization of absorption-based labels, thus setting the stage for directed evolution of OA GECIs. : Analytical Chemistry; Bioengineering; Biomaterials Subject Areas: Analytical Chemistry, Bioengineering, Biomaterialshttp://www.sciencedirect.com/science/article/pii/S2589004219304845 |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Urs A.T. Hofmann Arne Fabritius Johannes Rebling Héctor Estrada X. Luís Deán-Ben Oliver Griesbeck Daniel Razansky |
spellingShingle |
Urs A.T. Hofmann Arne Fabritius Johannes Rebling Héctor Estrada X. Luís Deán-Ben Oliver Griesbeck Daniel Razansky High-Throughput Platform for Optoacoustic Probing of Genetically Encoded Calcium Ion Indicators iScience |
author_facet |
Urs A.T. Hofmann Arne Fabritius Johannes Rebling Héctor Estrada X. Luís Deán-Ben Oliver Griesbeck Daniel Razansky |
author_sort |
Urs A.T. Hofmann |
title |
High-Throughput Platform for Optoacoustic Probing of Genetically Encoded Calcium Ion Indicators |
title_short |
High-Throughput Platform for Optoacoustic Probing of Genetically Encoded Calcium Ion Indicators |
title_full |
High-Throughput Platform for Optoacoustic Probing of Genetically Encoded Calcium Ion Indicators |
title_fullStr |
High-Throughput Platform for Optoacoustic Probing of Genetically Encoded Calcium Ion Indicators |
title_full_unstemmed |
High-Throughput Platform for Optoacoustic Probing of Genetically Encoded Calcium Ion Indicators |
title_sort |
high-throughput platform for optoacoustic probing of genetically encoded calcium ion indicators |
publisher |
Elsevier |
series |
iScience |
issn |
2589-0042 |
publishDate |
2019-12-01 |
description |
Summary: Functional optoacoustic (OA) imaging assisted with genetically encoded calcium ion indicators (GECIs) holds promise for imaging large-scale neuronal activity at depths and spatiotemporal resolutions not attainable with existing optical microscopic techniques. However, currently available GECIs optimized for fluorescence (FL) imaging lack sufficient contrast for OA imaging and respond at wavelengths having limited penetration into the mammalian brain. Here we present an imaging platform capable of rapid assessment and cross-validation between OA and FL responses of sensor proteins expressed in Escherichia coli colonies. The screening system features optimized pulsed light excitation combined with ultrasensitive ultrasound detection to mitigate photobleaching while further allowing the dynamic characterization of calcium ion responses with millisecond precision. Targeted probing of up to six individual colonies per second in both calcium-loaded and calcium-unloaded states was possible with the system. The new platform greatly facilitates optimization of absorption-based labels, thus setting the stage for directed evolution of OA GECIs. : Analytical Chemistry; Bioengineering; Biomaterials Subject Areas: Analytical Chemistry, Bioengineering, Biomaterials |
url |
http://www.sciencedirect.com/science/article/pii/S2589004219304845 |
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