Gene Regulatory Network Guided Investigations and Engineering of Storage Root Development in Root Crops
The plasticity of plant development relies on its ability to balance growth and stress resistance. To do this, plants have established highly coordinated gene regulatory networks (GRNs) of the transcription factors and signaling components involved in developmental processes and stress responses. In...
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doaj-32b00bdc0c774679a806bf88d476fa432020-11-25T03:47:14ZengFrontiers Media S.A.Frontiers in Plant Science1664-462X2020-06-011110.3389/fpls.2020.00762541815Gene Regulatory Network Guided Investigations and Engineering of Storage Root Development in Root CropsNam V. Hoang0Chulmin Park1Muhammad Kamran2Ji-Young Lee3Ji-Young Lee4School of Biological Sciences, Seoul National University, Seoul, South KoreaSchool of Biological Sciences, Seoul National University, Seoul, South KoreaSchool of Biological Sciences, Seoul National University, Seoul, South KoreaSchool of Biological Sciences, Seoul National University, Seoul, South KoreaPlant Genomics and Breeding Institute, Seoul National University, Seoul, South KoreaThe plasticity of plant development relies on its ability to balance growth and stress resistance. To do this, plants have established highly coordinated gene regulatory networks (GRNs) of the transcription factors and signaling components involved in developmental processes and stress responses. In root crops, yields of storage roots are mainly determined by secondary growth driven by the vascular cambium. In relation to this, a dynamic yet intricate GRN should operate in the vascular cambium, in coordination with environmental changes. Despite the significance of root crops as food sources, GRNs wired to mediate secondary growth in the storage root have just begun to emerge, specifically with the study of the radish. Gene expression data available with regard to other important root crops are not detailed enough for us directly to infer underlying molecular mechanisms. Thus, in this review, we provide a general overview of the regulatory programs governing the development and functions of the vascular cambium in model systems, and the role of the vascular cambium on the growth and yield potential of the storage roots in root crops. We then undertake a reanalysis of recent gene expression data generated for major root crops and discuss common GRNs involved in the vascular cambium-driven secondary growth in storage roots using the wealth of information available in Arabidopsis. Finally, we propose future engineering schemes for improving root crop yields by modifying potential key nodes in GRNs.https://www.frontiersin.org/article/10.3389/fpls.2020.00762/fullgene regulatory networkGRNstorage root developmentsecondary growthcambiumstress-responsive gene |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Nam V. Hoang Chulmin Park Muhammad Kamran Ji-Young Lee Ji-Young Lee |
spellingShingle |
Nam V. Hoang Chulmin Park Muhammad Kamran Ji-Young Lee Ji-Young Lee Gene Regulatory Network Guided Investigations and Engineering of Storage Root Development in Root Crops Frontiers in Plant Science gene regulatory network GRN storage root development secondary growth cambium stress-responsive gene |
author_facet |
Nam V. Hoang Chulmin Park Muhammad Kamran Ji-Young Lee Ji-Young Lee |
author_sort |
Nam V. Hoang |
title |
Gene Regulatory Network Guided Investigations and Engineering of Storage Root Development in Root Crops |
title_short |
Gene Regulatory Network Guided Investigations and Engineering of Storage Root Development in Root Crops |
title_full |
Gene Regulatory Network Guided Investigations and Engineering of Storage Root Development in Root Crops |
title_fullStr |
Gene Regulatory Network Guided Investigations and Engineering of Storage Root Development in Root Crops |
title_full_unstemmed |
Gene Regulatory Network Guided Investigations and Engineering of Storage Root Development in Root Crops |
title_sort |
gene regulatory network guided investigations and engineering of storage root development in root crops |
publisher |
Frontiers Media S.A. |
series |
Frontiers in Plant Science |
issn |
1664-462X |
publishDate |
2020-06-01 |
description |
The plasticity of plant development relies on its ability to balance growth and stress resistance. To do this, plants have established highly coordinated gene regulatory networks (GRNs) of the transcription factors and signaling components involved in developmental processes and stress responses. In root crops, yields of storage roots are mainly determined by secondary growth driven by the vascular cambium. In relation to this, a dynamic yet intricate GRN should operate in the vascular cambium, in coordination with environmental changes. Despite the significance of root crops as food sources, GRNs wired to mediate secondary growth in the storage root have just begun to emerge, specifically with the study of the radish. Gene expression data available with regard to other important root crops are not detailed enough for us directly to infer underlying molecular mechanisms. Thus, in this review, we provide a general overview of the regulatory programs governing the development and functions of the vascular cambium in model systems, and the role of the vascular cambium on the growth and yield potential of the storage roots in root crops. We then undertake a reanalysis of recent gene expression data generated for major root crops and discuss common GRNs involved in the vascular cambium-driven secondary growth in storage roots using the wealth of information available in Arabidopsis. Finally, we propose future engineering schemes for improving root crop yields by modifying potential key nodes in GRNs. |
topic |
gene regulatory network GRN storage root development secondary growth cambium stress-responsive gene |
url |
https://www.frontiersin.org/article/10.3389/fpls.2020.00762/full |
work_keys_str_mv |
AT namvhoang generegulatorynetworkguidedinvestigationsandengineeringofstoragerootdevelopmentinrootcrops AT chulminpark generegulatorynetworkguidedinvestigationsandengineeringofstoragerootdevelopmentinrootcrops AT muhammadkamran generegulatorynetworkguidedinvestigationsandengineeringofstoragerootdevelopmentinrootcrops AT jiyounglee generegulatorynetworkguidedinvestigationsandengineeringofstoragerootdevelopmentinrootcrops AT jiyounglee generegulatorynetworkguidedinvestigationsandengineeringofstoragerootdevelopmentinrootcrops |
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