Stimulus Feature-Specific Information Flow Along the Columnar Cortical Microcircuit Revealed by Multivariate Laminar Spiking Analysis

Most of the mammalian neocortex is comprised of a highly similar anatomical structure, consisting of a granular cell layer between superficial and deep layers. Even so, different cortical areas process different information. Taken together, this suggests that cortex features a canonical functional m...

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Main Authors: David A. Tovar, Jacob A. Westerberg, Michele A. Cox, Kacie Dougherty, Thomas A. Carlson, Mark T. Wallace, Alexander Maier
Format: Article
Language:English
Published: Frontiers Media S.A. 2020-11-01
Series:Frontiers in Systems Neuroscience
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fnsys.2020.600601/full
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language English
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author David A. Tovar
David A. Tovar
Jacob A. Westerberg
Jacob A. Westerberg
Jacob A. Westerberg
Michele A. Cox
Kacie Dougherty
Thomas A. Carlson
Mark T. Wallace
Mark T. Wallace
Mark T. Wallace
Mark T. Wallace
Mark T. Wallace
Mark T. Wallace
Mark T. Wallace
Alexander Maier
Alexander Maier
Alexander Maier
spellingShingle David A. Tovar
David A. Tovar
Jacob A. Westerberg
Jacob A. Westerberg
Jacob A. Westerberg
Michele A. Cox
Kacie Dougherty
Thomas A. Carlson
Mark T. Wallace
Mark T. Wallace
Mark T. Wallace
Mark T. Wallace
Mark T. Wallace
Mark T. Wallace
Mark T. Wallace
Alexander Maier
Alexander Maier
Alexander Maier
Stimulus Feature-Specific Information Flow Along the Columnar Cortical Microcircuit Revealed by Multivariate Laminar Spiking Analysis
Frontiers in Systems Neuroscience
cortical layers
cortical microcircuit
macaque
rhesus
machine learning
vision
author_facet David A. Tovar
David A. Tovar
Jacob A. Westerberg
Jacob A. Westerberg
Jacob A. Westerberg
Michele A. Cox
Kacie Dougherty
Thomas A. Carlson
Mark T. Wallace
Mark T. Wallace
Mark T. Wallace
Mark T. Wallace
Mark T. Wallace
Mark T. Wallace
Mark T. Wallace
Alexander Maier
Alexander Maier
Alexander Maier
author_sort David A. Tovar
title Stimulus Feature-Specific Information Flow Along the Columnar Cortical Microcircuit Revealed by Multivariate Laminar Spiking Analysis
title_short Stimulus Feature-Specific Information Flow Along the Columnar Cortical Microcircuit Revealed by Multivariate Laminar Spiking Analysis
title_full Stimulus Feature-Specific Information Flow Along the Columnar Cortical Microcircuit Revealed by Multivariate Laminar Spiking Analysis
title_fullStr Stimulus Feature-Specific Information Flow Along the Columnar Cortical Microcircuit Revealed by Multivariate Laminar Spiking Analysis
title_full_unstemmed Stimulus Feature-Specific Information Flow Along the Columnar Cortical Microcircuit Revealed by Multivariate Laminar Spiking Analysis
title_sort stimulus feature-specific information flow along the columnar cortical microcircuit revealed by multivariate laminar spiking analysis
publisher Frontiers Media S.A.
series Frontiers in Systems Neuroscience
issn 1662-5137
publishDate 2020-11-01
description Most of the mammalian neocortex is comprised of a highly similar anatomical structure, consisting of a granular cell layer between superficial and deep layers. Even so, different cortical areas process different information. Taken together, this suggests that cortex features a canonical functional microcircuit that supports region-specific information processing. For example, the primate primary visual cortex (V1) combines the two eyes' signals, extracts stimulus orientation, and integrates contextual information such as visual stimulation history. These processes co-occur during the same laminar stimulation sequence that is triggered by the onset of visual stimuli. Yet, we still know little regarding the laminar processing differences that are specific to each of these types of stimulus information. Univariate analysis techniques have provided great insight by examining one electrode at a time or by studying average responses across multiple electrodes. Here we focus on multivariate statistics to examine response patterns across electrodes instead. Specifically, we applied multivariate pattern analysis (MVPA) to linear multielectrode array recordings of laminar spiking responses to decode information regarding the eye-of-origin, stimulus orientation, and stimulus repetition. MVPA differs from conventional univariate approaches in that it examines patterns of neural activity across simultaneously recorded electrode sites. We were curious whether this added dimensionality could reveal neural processes on the population level that are challenging to detect when measuring brain activity without the context of neighboring recording sites. We found that eye-of-origin information was decodable for the entire duration of stimulus presentation, but diminished in the deepest layers of V1. Conversely, orientation information was transient and equally pronounced along all layers. More importantly, using time-resolved MVPA, we were able to evaluate laminar response properties beyond those yielded by univariate analyses. Specifically, we performed a time generalization analysis by training a classifier at one point of the neural response and testing its performance throughout the remaining period of stimulation. Using this technique, we demonstrate repeating (reverberating) patterns of neural activity that have not previously been observed using standard univariate approaches.
topic cortical layers
cortical microcircuit
macaque
rhesus
machine learning
vision
url https://www.frontiersin.org/articles/10.3389/fnsys.2020.600601/full
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spelling doaj-3247addac7df4957b4abf6fc1a225a812020-12-08T08:39:17ZengFrontiers Media S.A.Frontiers in Systems Neuroscience1662-51372020-11-011410.3389/fnsys.2020.600601600601Stimulus Feature-Specific Information Flow Along the Columnar Cortical Microcircuit Revealed by Multivariate Laminar Spiking AnalysisDavid A. Tovar0David A. Tovar1Jacob A. Westerberg2Jacob A. Westerberg3Jacob A. Westerberg4Michele A. Cox5Kacie Dougherty6Thomas A. Carlson7Mark T. Wallace8Mark T. Wallace9Mark T. Wallace10Mark T. Wallace11Mark T. Wallace12Mark T. Wallace13Mark T. Wallace14Alexander Maier15Alexander Maier16Alexander Maier17Neuroscience Program, Vanderbilt University, Nashville, TN, United StatesSchool of Medicine, Vanderbilt University, Nashville, TN, United StatesDepartment of Psychology, Vanderbilt University, Nashville, TN, United StatesCenter for Integrative and Cognitive Neuroscience, Vanderbilt University, Nashville, TN, United StatesVanderbilt Vision Research Center, Vanderbilt University, Nashville, TN, United StatesCenter for Visual Science, University of Rochester, Rochester, NY, United StatesPrinceton Neuroscience Institute, Princeton University, Princeton, NJ, United StatesSchool of Psychology, University of Sydney, Sydney, NSW, AustraliaSchool of Medicine, Vanderbilt University, Nashville, TN, United StatesDepartment of Psychology, Vanderbilt University, Nashville, TN, United StatesCenter for Integrative and Cognitive Neuroscience, Vanderbilt University, Nashville, TN, United StatesVanderbilt Vision Research Center, Vanderbilt University, Nashville, TN, United StatesDepartment of Hearing and Speech Sciences, Vanderbilt University, Nashville, TN, United States0Department of Psychiatry, Vanderbilt University, Nashville, TN, United States1Kennedy Center for Research on Human Development, Vanderbilt University, Nashville, TN, United StatesDepartment of Psychology, Vanderbilt University, Nashville, TN, United StatesCenter for Integrative and Cognitive Neuroscience, Vanderbilt University, Nashville, TN, United StatesVanderbilt Vision Research Center, Vanderbilt University, Nashville, TN, United StatesMost of the mammalian neocortex is comprised of a highly similar anatomical structure, consisting of a granular cell layer between superficial and deep layers. Even so, different cortical areas process different information. Taken together, this suggests that cortex features a canonical functional microcircuit that supports region-specific information processing. For example, the primate primary visual cortex (V1) combines the two eyes' signals, extracts stimulus orientation, and integrates contextual information such as visual stimulation history. These processes co-occur during the same laminar stimulation sequence that is triggered by the onset of visual stimuli. Yet, we still know little regarding the laminar processing differences that are specific to each of these types of stimulus information. Univariate analysis techniques have provided great insight by examining one electrode at a time or by studying average responses across multiple electrodes. Here we focus on multivariate statistics to examine response patterns across electrodes instead. Specifically, we applied multivariate pattern analysis (MVPA) to linear multielectrode array recordings of laminar spiking responses to decode information regarding the eye-of-origin, stimulus orientation, and stimulus repetition. MVPA differs from conventional univariate approaches in that it examines patterns of neural activity across simultaneously recorded electrode sites. We were curious whether this added dimensionality could reveal neural processes on the population level that are challenging to detect when measuring brain activity without the context of neighboring recording sites. We found that eye-of-origin information was decodable for the entire duration of stimulus presentation, but diminished in the deepest layers of V1. Conversely, orientation information was transient and equally pronounced along all layers. More importantly, using time-resolved MVPA, we were able to evaluate laminar response properties beyond those yielded by univariate analyses. Specifically, we performed a time generalization analysis by training a classifier at one point of the neural response and testing its performance throughout the remaining period of stimulation. Using this technique, we demonstrate repeating (reverberating) patterns of neural activity that have not previously been observed using standard univariate approaches.https://www.frontiersin.org/articles/10.3389/fnsys.2020.600601/fullcortical layerscortical microcircuitmacaquerhesusmachine learningvision