Morphological characterization and phylogenetic relationships of Indochinese box turtles—The Cuora galbinifrons complex

Abstract The members of the Indochinese box turtle complex, namely Cuora galbinifrons, Cuora bourreti, and Cuora picturata, rank the most critically endangered turtle species on earth after more than three decades of over‐harvesting for food, traditional Chinese medicine, and pet markets. Despite ad...

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Main Authors: Xiaoli Liu, Wei Li, Zhaoyang Ye, Yanyu Zhu, Xiaoyou Hong, Xinping Zhu
Format: Article
Language:English
Published: Wiley 2019-12-01
Series:Ecology and Evolution
Subjects:
Online Access:https://doi.org/10.1002/ece3.5680
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spelling doaj-31429a84bcec484a8e71f401bc830adb2021-03-02T07:17:28ZengWileyEcology and Evolution2045-77582019-12-01923130301304210.1002/ece3.5680Morphological characterization and phylogenetic relationships of Indochinese box turtles—The Cuora galbinifrons complexXiaoli Liu0Wei Li1Zhaoyang Ye2Yanyu Zhu3Xiaoyou Hong4Xinping Zhu5Key Laboratory of Aquatic Genomics Ministry of Agriculture Key Laboratory of Tropical & Subtropical Fishery Resource Application & Cultivation of Ministry of Agriculture Pearl River Fisheries Research Institute Chinese Academy of Fishery Sciences Guangzhou ChinaKey Laboratory of Aquatic Genomics Ministry of Agriculture Key Laboratory of Tropical & Subtropical Fishery Resource Application & Cultivation of Ministry of Agriculture Pearl River Fisheries Research Institute Chinese Academy of Fishery Sciences Guangzhou ChinaKey Laboratory of Aquatic Genomics Ministry of Agriculture Key Laboratory of Tropical & Subtropical Fishery Resource Application & Cultivation of Ministry of Agriculture Pearl River Fisheries Research Institute Chinese Academy of Fishery Sciences Guangzhou ChinaKey Laboratory of Aquatic Genomics Ministry of Agriculture Key Laboratory of Tropical & Subtropical Fishery Resource Application & Cultivation of Ministry of Agriculture Pearl River Fisheries Research Institute Chinese Academy of Fishery Sciences Guangzhou ChinaKey Laboratory of Aquatic Genomics Ministry of Agriculture Key Laboratory of Tropical & Subtropical Fishery Resource Application & Cultivation of Ministry of Agriculture Pearl River Fisheries Research Institute Chinese Academy of Fishery Sciences Guangzhou ChinaKey Laboratory of Aquatic Genomics Ministry of Agriculture Key Laboratory of Tropical & Subtropical Fishery Resource Application & Cultivation of Ministry of Agriculture Pearl River Fisheries Research Institute Chinese Academy of Fishery Sciences Guangzhou ChinaAbstract The members of the Indochinese box turtle complex, namely Cuora galbinifrons, Cuora bourreti, and Cuora picturata, rank the most critically endangered turtle species on earth after more than three decades of over‐harvesting for food, traditional Chinese medicine, and pet markets. Despite advances in molecular biology, species boundaries and phylogenetic relationships, the status of the C. galbinifrons complex remains unresolved due to the small number of specimens observed and collected in the field. In this study, we present analyses of morphologic characters as well as mitochondrial and nuclear DNA data to reconstruct the species boundaries and systematic relationships within the C. galbinifrons complex. Based on principal component analysis (PCA) and statistical analysis, we found that phenotypic traits partially overlapped among galbinifrons, bourreti, and picturata, and that galbinifrons and bourreti might be only subspecifically distinct. Moreover, we used the mitochondrial genome, COI, and nuclear gene Rag1 under the maximum likelihood criteria and Bayesian inference criteria to elucidate whether C. galbinifrons could be divided into three separate species or subspecies. We found strong support for a sister relationship between picturata and the other two species, and consequently, we recommend maintaining picturata as a full species, and classifying bourreti and galbinifrons as subspecies of C. galbinifrons. These findings provide evidence for a better understanding of the evolutionary histories of these critically endangered turtles.https://doi.org/10.1002/ece3.5680Cuoramolecular markermorphologyphylogeneticsturtle
collection DOAJ
language English
format Article
sources DOAJ
author Xiaoli Liu
Wei Li
Zhaoyang Ye
Yanyu Zhu
Xiaoyou Hong
Xinping Zhu
spellingShingle Xiaoli Liu
Wei Li
Zhaoyang Ye
Yanyu Zhu
Xiaoyou Hong
Xinping Zhu
Morphological characterization and phylogenetic relationships of Indochinese box turtles—The Cuora galbinifrons complex
Ecology and Evolution
Cuora
molecular marker
morphology
phylogenetics
turtle
author_facet Xiaoli Liu
Wei Li
Zhaoyang Ye
Yanyu Zhu
Xiaoyou Hong
Xinping Zhu
author_sort Xiaoli Liu
title Morphological characterization and phylogenetic relationships of Indochinese box turtles—The Cuora galbinifrons complex
title_short Morphological characterization and phylogenetic relationships of Indochinese box turtles—The Cuora galbinifrons complex
title_full Morphological characterization and phylogenetic relationships of Indochinese box turtles—The Cuora galbinifrons complex
title_fullStr Morphological characterization and phylogenetic relationships of Indochinese box turtles—The Cuora galbinifrons complex
title_full_unstemmed Morphological characterization and phylogenetic relationships of Indochinese box turtles—The Cuora galbinifrons complex
title_sort morphological characterization and phylogenetic relationships of indochinese box turtles—the cuora galbinifrons complex
publisher Wiley
series Ecology and Evolution
issn 2045-7758
publishDate 2019-12-01
description Abstract The members of the Indochinese box turtle complex, namely Cuora galbinifrons, Cuora bourreti, and Cuora picturata, rank the most critically endangered turtle species on earth after more than three decades of over‐harvesting for food, traditional Chinese medicine, and pet markets. Despite advances in molecular biology, species boundaries and phylogenetic relationships, the status of the C. galbinifrons complex remains unresolved due to the small number of specimens observed and collected in the field. In this study, we present analyses of morphologic characters as well as mitochondrial and nuclear DNA data to reconstruct the species boundaries and systematic relationships within the C. galbinifrons complex. Based on principal component analysis (PCA) and statistical analysis, we found that phenotypic traits partially overlapped among galbinifrons, bourreti, and picturata, and that galbinifrons and bourreti might be only subspecifically distinct. Moreover, we used the mitochondrial genome, COI, and nuclear gene Rag1 under the maximum likelihood criteria and Bayesian inference criteria to elucidate whether C. galbinifrons could be divided into three separate species or subspecies. We found strong support for a sister relationship between picturata and the other two species, and consequently, we recommend maintaining picturata as a full species, and classifying bourreti and galbinifrons as subspecies of C. galbinifrons. These findings provide evidence for a better understanding of the evolutionary histories of these critically endangered turtles.
topic Cuora
molecular marker
morphology
phylogenetics
turtle
url https://doi.org/10.1002/ece3.5680
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