<b>QSAR study of benzimidazole derivatives inhibition on escherichia coli methionine Aminopeptidase</b>

The paper describes a quantitative structure-activity relationship (QSAR) study of IC<sub>50</sub> values of benzimidazole derivatives on escherichia coli methionine aminopeptidase. The activity of the 32 inhibitors has been estimated by means of multiple linear regression (MLR) and arti...

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Main Authors: Zahra Garkani-Nejad, Fereshteh Saneie
Format: Article
Language:English
Published: Chemical Society of Ethiopia 2010-06-01
Series:Bulletin of the Chemical Society of Ethiopia
Subjects:
Online Access:http://ajol.info/index.php/bcse/article/view/60661
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spelling doaj-3129931b79f240c4a4804e090217df9c2020-11-24T22:16:43ZengChemical Society of EthiopiaBulletin of the Chemical Society of Ethiopia1011-39241726-801X2010-06-01243317325<b>QSAR study of benzimidazole derivatives inhibition on escherichia coli methionine Aminopeptidase</b>Zahra Garkani-NejadFereshteh SaneieThe paper describes a quantitative structure-activity relationship (QSAR) study of IC<sub>50</sub> values of benzimidazole derivatives on escherichia coli methionine aminopeptidase. The activity of the 32 inhibitors has been estimated by means of multiple linear regression (MLR) and artificial neural network (ANN) techniques. The results obtained using the MLR method indicate that the activity of derivatives of benzimidazoles on CoII-loaded escherichia coli methionine aminopeptidase depend on different parameters containing topological descriptors, Burden eigen values, 3D MoRSE descriptors and 2D autocorrelation descriptors. The best artificial neural network model is a fully-connected, feed forward back propagation network with a 5-4-1 architecture. Standard error for the training set using this network was 0.193 with correlation coefficient 0.996 and for the prediction set standard error was 1.41 with correlation coefficient 0.802. Comparison of the quality of the ANN with different MLR models showed that ANN has a better predictive power.http://ajol.info/index.php/bcse/article/view/60661QSARArtificial neural networkMultiple linear regressionMolecular descriptorsEscherichia coli methionine aminopeptidase
collection DOAJ
language English
format Article
sources DOAJ
author Zahra Garkani-Nejad
Fereshteh Saneie
spellingShingle Zahra Garkani-Nejad
Fereshteh Saneie
<b>QSAR study of benzimidazole derivatives inhibition on escherichia coli methionine Aminopeptidase</b>
Bulletin of the Chemical Society of Ethiopia
QSAR
Artificial neural network
Multiple linear regression
Molecular descriptors
Escherichia coli methionine aminopeptidase
author_facet Zahra Garkani-Nejad
Fereshteh Saneie
author_sort Zahra Garkani-Nejad
title <b>QSAR study of benzimidazole derivatives inhibition on escherichia coli methionine Aminopeptidase</b>
title_short <b>QSAR study of benzimidazole derivatives inhibition on escherichia coli methionine Aminopeptidase</b>
title_full <b>QSAR study of benzimidazole derivatives inhibition on escherichia coli methionine Aminopeptidase</b>
title_fullStr <b>QSAR study of benzimidazole derivatives inhibition on escherichia coli methionine Aminopeptidase</b>
title_full_unstemmed <b>QSAR study of benzimidazole derivatives inhibition on escherichia coli methionine Aminopeptidase</b>
title_sort <b>qsar study of benzimidazole derivatives inhibition on escherichia coli methionine aminopeptidase</b>
publisher Chemical Society of Ethiopia
series Bulletin of the Chemical Society of Ethiopia
issn 1011-3924
1726-801X
publishDate 2010-06-01
description The paper describes a quantitative structure-activity relationship (QSAR) study of IC<sub>50</sub> values of benzimidazole derivatives on escherichia coli methionine aminopeptidase. The activity of the 32 inhibitors has been estimated by means of multiple linear regression (MLR) and artificial neural network (ANN) techniques. The results obtained using the MLR method indicate that the activity of derivatives of benzimidazoles on CoII-loaded escherichia coli methionine aminopeptidase depend on different parameters containing topological descriptors, Burden eigen values, 3D MoRSE descriptors and 2D autocorrelation descriptors. The best artificial neural network model is a fully-connected, feed forward back propagation network with a 5-4-1 architecture. Standard error for the training set using this network was 0.193 with correlation coefficient 0.996 and for the prediction set standard error was 1.41 with correlation coefficient 0.802. Comparison of the quality of the ANN with different MLR models showed that ANN has a better predictive power.
topic QSAR
Artificial neural network
Multiple linear regression
Molecular descriptors
Escherichia coli methionine aminopeptidase
url http://ajol.info/index.php/bcse/article/view/60661
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