COVID-XNet: A Custom Deep Learning System to Diagnose and Locate COVID-19 in Chest X-ray Images

The COVID-19 pandemic caused by the new coronavirus SARS-CoV-2 has changed the world as we know it. An early diagnosis is crucial in order to prevent new outbreaks and control its rapid spread. Medical imaging techniques, such as X-ray or chest computed tomography, are commonly used for this purpose...

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Main Authors: Lourdes Duran-Lopez, Juan Pedro Dominguez-Morales, Jesús Corral-Jaime, Saturnino Vicente-Diaz, Alejandro Linares-Barranco
Format: Article
Language:English
Published: MDPI AG 2020-08-01
Series:Applied Sciences
Subjects:
Online Access:https://www.mdpi.com/2076-3417/10/16/5683
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spelling doaj-30893f57fedb47a584962f755dac24b72020-11-25T03:46:04ZengMDPI AGApplied Sciences2076-34172020-08-01105683568310.3390/app10165683COVID-XNet: A Custom Deep Learning System to Diagnose and Locate COVID-19 in Chest X-ray ImagesLourdes Duran-Lopez0Juan Pedro Dominguez-Morales1Jesús Corral-Jaime2Saturnino Vicente-Diaz3Alejandro Linares-Barranco4Robotics and Tech. of Computers Lab, ETSII-EPS, Universidad de Sevilla, 41011 Seville, SpainRobotics and Tech. of Computers Lab, ETSII-EPS, Universidad de Sevilla, 41011 Seville, SpainServicio de Oncología Médica, Clinica Universidad de Navarra, 28027 Madrid, SpainRobotics and Tech. of Computers Lab, ETSII-EPS, Universidad de Sevilla, 41011 Seville, SpainRobotics and Tech. of Computers Lab, ETSII-EPS, Universidad de Sevilla, 41011 Seville, SpainThe COVID-19 pandemic caused by the new coronavirus SARS-CoV-2 has changed the world as we know it. An early diagnosis is crucial in order to prevent new outbreaks and control its rapid spread. Medical imaging techniques, such as X-ray or chest computed tomography, are commonly used for this purpose due to their reliability for COVID-19 diagnosis. Computer-aided diagnosis systems could play an essential role in aiding radiologists in the screening process. In this work, a novel Deep Learning-based system, called COVID-XNet, is presented for COVID-19 diagnosis in chest X-ray images. The proposed system performs a set of preprocessing algorithms to the input images for variability reduction and contrast enhancement, which are then fed to a custom Convolutional Neural Network in order to extract relevant features and perform the classification between COVID-19 and normal cases. The system is trained and validated using a 5-fold cross-validation scheme, achieving an average accuracy of 94.43% and an AUC of 0.988. The output of the system can be visualized using Class Activation Maps, highlighting the main findings for COVID-19 in X-ray images. These promising results indicate that COVID-XNet could be used as a tool to aid radiologists and contribute to the fight against COVID-19.https://www.mdpi.com/2076-3417/10/16/5683COVID-19deep learningconvolutional neural networksmedical image analysiscomputer-aided diagnosisX-ray
collection DOAJ
language English
format Article
sources DOAJ
author Lourdes Duran-Lopez
Juan Pedro Dominguez-Morales
Jesús Corral-Jaime
Saturnino Vicente-Diaz
Alejandro Linares-Barranco
spellingShingle Lourdes Duran-Lopez
Juan Pedro Dominguez-Morales
Jesús Corral-Jaime
Saturnino Vicente-Diaz
Alejandro Linares-Barranco
COVID-XNet: A Custom Deep Learning System to Diagnose and Locate COVID-19 in Chest X-ray Images
Applied Sciences
COVID-19
deep learning
convolutional neural networks
medical image analysis
computer-aided diagnosis
X-ray
author_facet Lourdes Duran-Lopez
Juan Pedro Dominguez-Morales
Jesús Corral-Jaime
Saturnino Vicente-Diaz
Alejandro Linares-Barranco
author_sort Lourdes Duran-Lopez
title COVID-XNet: A Custom Deep Learning System to Diagnose and Locate COVID-19 in Chest X-ray Images
title_short COVID-XNet: A Custom Deep Learning System to Diagnose and Locate COVID-19 in Chest X-ray Images
title_full COVID-XNet: A Custom Deep Learning System to Diagnose and Locate COVID-19 in Chest X-ray Images
title_fullStr COVID-XNet: A Custom Deep Learning System to Diagnose and Locate COVID-19 in Chest X-ray Images
title_full_unstemmed COVID-XNet: A Custom Deep Learning System to Diagnose and Locate COVID-19 in Chest X-ray Images
title_sort covid-xnet: a custom deep learning system to diagnose and locate covid-19 in chest x-ray images
publisher MDPI AG
series Applied Sciences
issn 2076-3417
publishDate 2020-08-01
description The COVID-19 pandemic caused by the new coronavirus SARS-CoV-2 has changed the world as we know it. An early diagnosis is crucial in order to prevent new outbreaks and control its rapid spread. Medical imaging techniques, such as X-ray or chest computed tomography, are commonly used for this purpose due to their reliability for COVID-19 diagnosis. Computer-aided diagnosis systems could play an essential role in aiding radiologists in the screening process. In this work, a novel Deep Learning-based system, called COVID-XNet, is presented for COVID-19 diagnosis in chest X-ray images. The proposed system performs a set of preprocessing algorithms to the input images for variability reduction and contrast enhancement, which are then fed to a custom Convolutional Neural Network in order to extract relevant features and perform the classification between COVID-19 and normal cases. The system is trained and validated using a 5-fold cross-validation scheme, achieving an average accuracy of 94.43% and an AUC of 0.988. The output of the system can be visualized using Class Activation Maps, highlighting the main findings for COVID-19 in X-ray images. These promising results indicate that COVID-XNet could be used as a tool to aid radiologists and contribute to the fight against COVID-19.
topic COVID-19
deep learning
convolutional neural networks
medical image analysis
computer-aided diagnosis
X-ray
url https://www.mdpi.com/2076-3417/10/16/5683
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