Identification, Classification, and Expression Analysis of the <i>Triacylglycerol Lipase</i> (<i>TGL</i>) Gene Family Related to Abiotic Stresses in Tomato

Triacylglycerol Lipases (TGLs) are the major enzymes involved in triacylglycerol catabolism. TGLs hydrolyze long-chain fatty acid triglycerides, which are involved in plant development and abiotic stress responses. Whereas most studies of TGLs have focused on seed oil metabolism and biofuel in plant...

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Main Authors: Qi Wang, Xin Xu, Xiaoyu Cao, Tixu Hu, Dongnan Xia, Jianhua Zhu, Xiangqiang Zhan
Format: Article
Language:English
Published: MDPI AG 2021-01-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:https://www.mdpi.com/1422-0067/22/3/1387
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spelling doaj-30355ea15f2e4f48b5bc14e74e8ef4b82021-01-31T00:02:50ZengMDPI AGInternational Journal of Molecular Sciences1661-65961422-00672021-01-01221387138710.3390/ijms22031387Identification, Classification, and Expression Analysis of the <i>Triacylglycerol Lipase</i> (<i>TGL</i>) Gene Family Related to Abiotic Stresses in TomatoQi Wang0Xin Xu1Xiaoyu Cao2Tixu Hu3Dongnan Xia4Jianhua Zhu5Xiangqiang Zhan6State Key Laboratory of Crop Stress Biology for Arid Areas, College of Horticulture, Northwest A&F University, Yangling 712100, ChinaState Key Laboratory of Crop Stress Biology for Arid Areas, College of Horticulture, Northwest A&F University, Yangling 712100, ChinaState Key Laboratory of Crop Stress Biology for Arid Areas, College of Horticulture, Northwest A&F University, Yangling 712100, ChinaState Key Laboratory of Crop Stress Biology for Arid Areas, College of Horticulture, Northwest A&F University, Yangling 712100, ChinaState Key Laboratory of Crop Stress Biology for Arid Areas, College of Horticulture, Northwest A&F University, Yangling 712100, ChinaDepartment of Plant Science and Landscape Architecture, University of Maryland, College Park, MD 20742, USAState Key Laboratory of Crop Stress Biology for Arid Areas, College of Horticulture, Northwest A&F University, Yangling 712100, ChinaTriacylglycerol Lipases (TGLs) are the major enzymes involved in triacylglycerol catabolism. TGLs hydrolyze long-chain fatty acid triglycerides, which are involved in plant development and abiotic stress responses. Whereas most studies of TGLs have focused on seed oil metabolism and biofuel in plants, limited information is available regarding the genome-wide identification and characterization of the <i>TGL</i> gene family in tomato (<i>Solanum lycopersicum</i> L.). Based on the latest published tomato genome annotation ITAG4.0, 129 <i>SlTGL</i> genes were identified and classified into 5 categories according to their structural characteristics. Most <i>SlTGL</i> genes were distributed on 3 of 12 chromosomes. Segment duplication appeared to be the driving force underlying expansion of the <i>TGL</i> gene family in tomato. The promoter analysis revealed that the promoters of <i>SlTGL</i>s contained many stress responsiveness <i>cis</i>-elements, such as ARE, LTR, MBS, WRE3, and WUN-motifs. Expression of the majority of <i>SlTGL</i> genes was suppressed following exposure to chilling and heat, while it was induced under drought stress, such as <i>SlTGLa9, SlTGLa6, SlTGLa25, SlTGLa26</i>, and <i>SlTGLa13</i>. These results provide valuable insights into the roles of the <i>SlTGL</i> genes family and lay a foundation for further functional studies on the linkage between triacylglycerol catabolism and abiotic stress responses in tomato.https://www.mdpi.com/1422-0067/22/3/1387tomatotriacylglycerol lipase (TGL)classificationphylogenetic analysisgene expression patternsabiotic stress responses
collection DOAJ
language English
format Article
sources DOAJ
author Qi Wang
Xin Xu
Xiaoyu Cao
Tixu Hu
Dongnan Xia
Jianhua Zhu
Xiangqiang Zhan
spellingShingle Qi Wang
Xin Xu
Xiaoyu Cao
Tixu Hu
Dongnan Xia
Jianhua Zhu
Xiangqiang Zhan
Identification, Classification, and Expression Analysis of the <i>Triacylglycerol Lipase</i> (<i>TGL</i>) Gene Family Related to Abiotic Stresses in Tomato
International Journal of Molecular Sciences
tomato
triacylglycerol lipase (TGL)
classification
phylogenetic analysis
gene expression patterns
abiotic stress responses
author_facet Qi Wang
Xin Xu
Xiaoyu Cao
Tixu Hu
Dongnan Xia
Jianhua Zhu
Xiangqiang Zhan
author_sort Qi Wang
title Identification, Classification, and Expression Analysis of the <i>Triacylglycerol Lipase</i> (<i>TGL</i>) Gene Family Related to Abiotic Stresses in Tomato
title_short Identification, Classification, and Expression Analysis of the <i>Triacylglycerol Lipase</i> (<i>TGL</i>) Gene Family Related to Abiotic Stresses in Tomato
title_full Identification, Classification, and Expression Analysis of the <i>Triacylglycerol Lipase</i> (<i>TGL</i>) Gene Family Related to Abiotic Stresses in Tomato
title_fullStr Identification, Classification, and Expression Analysis of the <i>Triacylglycerol Lipase</i> (<i>TGL</i>) Gene Family Related to Abiotic Stresses in Tomato
title_full_unstemmed Identification, Classification, and Expression Analysis of the <i>Triacylglycerol Lipase</i> (<i>TGL</i>) Gene Family Related to Abiotic Stresses in Tomato
title_sort identification, classification, and expression analysis of the <i>triacylglycerol lipase</i> (<i>tgl</i>) gene family related to abiotic stresses in tomato
publisher MDPI AG
series International Journal of Molecular Sciences
issn 1661-6596
1422-0067
publishDate 2021-01-01
description Triacylglycerol Lipases (TGLs) are the major enzymes involved in triacylglycerol catabolism. TGLs hydrolyze long-chain fatty acid triglycerides, which are involved in plant development and abiotic stress responses. Whereas most studies of TGLs have focused on seed oil metabolism and biofuel in plants, limited information is available regarding the genome-wide identification and characterization of the <i>TGL</i> gene family in tomato (<i>Solanum lycopersicum</i> L.). Based on the latest published tomato genome annotation ITAG4.0, 129 <i>SlTGL</i> genes were identified and classified into 5 categories according to their structural characteristics. Most <i>SlTGL</i> genes were distributed on 3 of 12 chromosomes. Segment duplication appeared to be the driving force underlying expansion of the <i>TGL</i> gene family in tomato. The promoter analysis revealed that the promoters of <i>SlTGL</i>s contained many stress responsiveness <i>cis</i>-elements, such as ARE, LTR, MBS, WRE3, and WUN-motifs. Expression of the majority of <i>SlTGL</i> genes was suppressed following exposure to chilling and heat, while it was induced under drought stress, such as <i>SlTGLa9, SlTGLa6, SlTGLa25, SlTGLa26</i>, and <i>SlTGLa13</i>. These results provide valuable insights into the roles of the <i>SlTGL</i> genes family and lay a foundation for further functional studies on the linkage between triacylglycerol catabolism and abiotic stress responses in tomato.
topic tomato
triacylglycerol lipase (TGL)
classification
phylogenetic analysis
gene expression patterns
abiotic stress responses
url https://www.mdpi.com/1422-0067/22/3/1387
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