Detection and molecular characterization of β-lactamase genes in clinical isolates of Gram-negative bacteria in Southern Ecuador

This work performed a phenotypic and genotypic characterization of 79 clinical isolates of Enterobacteriaceae and Pseudomonadaceae collected in hospitals of Southern Ecuadorin 2013. Our results showed a high incidence of β-lactamases and ESBLs with blaTEM and blaCTX-M as the prevalent genes, respect...

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Main Authors: Diana Yessenia Calva Delgado, Zorayda Patricia Toledo Barrigas, Sofía Genoveva Ochoa Astutillo, Ana Paulina Arévalo Jaramillo, Alessio Ausili
Format: Article
Language:English
Published: Elsevier 2016-11-01
Series:Brazilian Journal of Infectious Diseases
Online Access:http://www.sciencedirect.com/science/article/pii/S1413867016301179
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spelling doaj-2faa0b67908c479ab0fe95a49298f4dd2020-11-25T02:31:39ZengElsevierBrazilian Journal of Infectious Diseases1413-86702016-11-01206627630S1413-86702016000600627Detection and molecular characterization of β-lactamase genes in clinical isolates of Gram-negative bacteria in Southern EcuadorDiana Yessenia Calva Delgado0Zorayda Patricia Toledo Barrigas1Sofía Genoveva Ochoa Astutillo2Ana Paulina Arévalo Jaramillo3Alessio Ausili4Universidad Técnica Particular de Loja (UTPL), Departamento de Ciencias de la Salud, Loja, EcuadorUniversidad Técnica Particular de Loja (UTPL), Departamento de Ciencias de la Salud, Loja, EcuadorUniversidad Técnica Particular de Loja (UTPL), Departamento de Ciencias de la Salud, Loja, EcuadorUniversidad Técnica Particular de Loja (UTPL), Departamento de Ciencias de la Salud, Loja, EcuadorUniversidad Técnica Particular de Loja (UTPL), Departamento de Ciencias de la Salud, Loja, Ecuador; Secretaría Nacional de Educación Superior, Ciencia, Tecnología e Innovación (SENESCYT), Quito, Ecuador; Corresponding author.This work performed a phenotypic and genotypic characterization of 79 clinical isolates of Enterobacteriaceae and Pseudomonadaceae collected in hospitals of Southern Ecuadorin 2013. Our results showed a high incidence of β-lactamases and ESBLs with blaTEM and blaCTX-M as the prevalent genes, respectively. By direct sequencing of PCR amplicons, the different β-lactamases and variants of the genes were also distinguished. Our results revealed a predominance of TEM-1 β-lactamase and the presence of different CTX-M variants with a prevalence of CTX-M-15. Two infrequent CTX-M variants in South America were also identified. To the best of our knowledge, this is one of the first studies describing the genetic characteristics of β-lactamases in Ecuador. Keywords: β-Lactam resistance, β-Lactamase, ESBL, Genotypic characterizationhttp://www.sciencedirect.com/science/article/pii/S1413867016301179
collection DOAJ
language English
format Article
sources DOAJ
author Diana Yessenia Calva Delgado
Zorayda Patricia Toledo Barrigas
Sofía Genoveva Ochoa Astutillo
Ana Paulina Arévalo Jaramillo
Alessio Ausili
spellingShingle Diana Yessenia Calva Delgado
Zorayda Patricia Toledo Barrigas
Sofía Genoveva Ochoa Astutillo
Ana Paulina Arévalo Jaramillo
Alessio Ausili
Detection and molecular characterization of β-lactamase genes in clinical isolates of Gram-negative bacteria in Southern Ecuador
Brazilian Journal of Infectious Diseases
author_facet Diana Yessenia Calva Delgado
Zorayda Patricia Toledo Barrigas
Sofía Genoveva Ochoa Astutillo
Ana Paulina Arévalo Jaramillo
Alessio Ausili
author_sort Diana Yessenia Calva Delgado
title Detection and molecular characterization of β-lactamase genes in clinical isolates of Gram-negative bacteria in Southern Ecuador
title_short Detection and molecular characterization of β-lactamase genes in clinical isolates of Gram-negative bacteria in Southern Ecuador
title_full Detection and molecular characterization of β-lactamase genes in clinical isolates of Gram-negative bacteria in Southern Ecuador
title_fullStr Detection and molecular characterization of β-lactamase genes in clinical isolates of Gram-negative bacteria in Southern Ecuador
title_full_unstemmed Detection and molecular characterization of β-lactamase genes in clinical isolates of Gram-negative bacteria in Southern Ecuador
title_sort detection and molecular characterization of β-lactamase genes in clinical isolates of gram-negative bacteria in southern ecuador
publisher Elsevier
series Brazilian Journal of Infectious Diseases
issn 1413-8670
publishDate 2016-11-01
description This work performed a phenotypic and genotypic characterization of 79 clinical isolates of Enterobacteriaceae and Pseudomonadaceae collected in hospitals of Southern Ecuadorin 2013. Our results showed a high incidence of β-lactamases and ESBLs with blaTEM and blaCTX-M as the prevalent genes, respectively. By direct sequencing of PCR amplicons, the different β-lactamases and variants of the genes were also distinguished. Our results revealed a predominance of TEM-1 β-lactamase and the presence of different CTX-M variants with a prevalence of CTX-M-15. Two infrequent CTX-M variants in South America were also identified. To the best of our knowledge, this is one of the first studies describing the genetic characteristics of β-lactamases in Ecuador. Keywords: β-Lactam resistance, β-Lactamase, ESBL, Genotypic characterization
url http://www.sciencedirect.com/science/article/pii/S1413867016301179
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