Transcriptional Profile Corroborates that <i>bml</i> Mutant Plays likely Role in Premature Leaf Senescence of Rice (<i>Oryza sativa</i> L.)

Leaf senescence is the last period of leaf growth and a dynamic procedure associated with its death. The adaptability of the plants to changing environments occurs thanks to leaf senescence. Hence, transcriptional profiling is important to figure out the exact mechanisms of inducing leaf senescence...

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Bibliographic Details
Main Authors: Delara Akhter, Ran Qin, Ujjal Kumar Nath, Jamal Eshag, Xiaoli Jin, Chunhai Shi
Format: Article
Language:English
Published: MDPI AG 2019-04-01
Series:International Journal of Molecular Sciences
Subjects:
GO
KOG
Online Access:https://www.mdpi.com/1422-0067/20/7/1708
Description
Summary:Leaf senescence is the last period of leaf growth and a dynamic procedure associated with its death. The adaptability of the plants to changing environments occurs thanks to leaf senescence. Hence, transcriptional profiling is important to figure out the exact mechanisms of inducing leaf senescence in a particular crop, such as rice. From this perspective, leaf samples of two different rice genotypes, the <i>brown midrib leaf</i> (<i>bml</i>) mutant and its wild type (WT) were sampled for transcriptional profiling to identify differentially-expressed genes (DEGs). We identified 2670 DEGs, among which 1657 genes were up- and 1013 genes were down-regulated. These DEGs were enriched in binding and catalytic activity, followed by the single organism process and metabolic process through gene ontology (GO), while the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis showed that the DEGs were related to the plant hormone signal transduction and photosynthetic pathway enrichment. The expression pattern and the clustering of DEGs revealed that the <i>WRKY</i> and <i>NAC</i> family, as well as zinc finger transcription factors, had greater effects on early-senescence of leaf compared to other transcription factors. These findings will help to elucidate the precise functional role of <i>bml</i> rice mutant in the early-leaf senescence.
ISSN:1422-0067