Comprehensive Analysis of Evolutionary Characterization and Expression for Monosaccharide Transporter Family Genes in Nelumbo nucifera

Sugar transporters, an important class of transporters for sugar function, regulate many processes associated with growth, maturation, and senescence processes in plants. In this study, a total of 35 NuMSTs were identified in the Nelumbo nucifera genome and grouped by conserved domains and phylogene...

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Main Authors: Peng Wu, Yongyan Zhang, Shuping Zhao, Liangjun Li
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-02-01
Series:Frontiers in Ecology and Evolution
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fevo.2021.537398/full
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spelling doaj-2f399af39637417dac365c44a0b6e8582021-02-15T05:58:23ZengFrontiers Media S.A.Frontiers in Ecology and Evolution2296-701X2021-02-01910.3389/fevo.2021.537398537398Comprehensive Analysis of Evolutionary Characterization and Expression for Monosaccharide Transporter Family Genes in Nelumbo nuciferaPeng Wu0Yongyan Zhang1Shuping Zhao2Liangjun Li3Liangjun Li4School of Horticulture and Plant Protection, Yangzhou University, Yangzhou, ChinaSchool of Horticulture and Plant Protection, Yangzhou University, Yangzhou, ChinaSchool of Horticulture and Plant Protection, Yangzhou University, Yangzhou, ChinaSchool of Horticulture and Plant Protection, Yangzhou University, Yangzhou, ChinaJoint International Research Laboratory of Agriculture and Agri-Product Safety of Ministry of Education of China, Yangzhou University, Yangzhou, ChinaSugar transporters, an important class of transporters for sugar function, regulate many processes associated with growth, maturation, and senescence processes in plants. In this study, a total of 35 NuMSTs were identified in the Nelumbo nucifera genome and grouped by conserved domains and phylogenetic analysis. Additionally, we identified 316 MST genes in 10 other representative plants and performed a comparative analysis with Nelumbo nucifera genes, including evolutionary trajectory, gene duplication, and expression pattern. A large number of analyses across plants and algae indicated that the MST family could have originated from STP and Glct, expanding to form STP and SFP by dispersed duplication. Finally, a quantitative real-time polymerase chain reaction and cis-element analysis showed that some of them may be regulated by plant hormones (e.g., abscisic acid), biotic stress factors, and abiotic factors (e.g., drought, excessive cold, and light). We found that under the four abiotic stress conditions, only NuSTP5 expression was upregulated, generating a stress response, and ARBE and LTR were present in NuSTP5. In summary, our findings are significant for understanding and exploring the molecular evolution and mechanisms of NuMSTs in plants.https://www.frontiersin.org/articles/10.3389/fevo.2021.537398/fullgene rentainconserved syntenyevolutionary modelgene expression pattern analysisabiotic stresses
collection DOAJ
language English
format Article
sources DOAJ
author Peng Wu
Yongyan Zhang
Shuping Zhao
Liangjun Li
Liangjun Li
spellingShingle Peng Wu
Yongyan Zhang
Shuping Zhao
Liangjun Li
Liangjun Li
Comprehensive Analysis of Evolutionary Characterization and Expression for Monosaccharide Transporter Family Genes in Nelumbo nucifera
Frontiers in Ecology and Evolution
gene rentain
conserved synteny
evolutionary model
gene expression pattern analysis
abiotic stresses
author_facet Peng Wu
Yongyan Zhang
Shuping Zhao
Liangjun Li
Liangjun Li
author_sort Peng Wu
title Comprehensive Analysis of Evolutionary Characterization and Expression for Monosaccharide Transporter Family Genes in Nelumbo nucifera
title_short Comprehensive Analysis of Evolutionary Characterization and Expression for Monosaccharide Transporter Family Genes in Nelumbo nucifera
title_full Comprehensive Analysis of Evolutionary Characterization and Expression for Monosaccharide Transporter Family Genes in Nelumbo nucifera
title_fullStr Comprehensive Analysis of Evolutionary Characterization and Expression for Monosaccharide Transporter Family Genes in Nelumbo nucifera
title_full_unstemmed Comprehensive Analysis of Evolutionary Characterization and Expression for Monosaccharide Transporter Family Genes in Nelumbo nucifera
title_sort comprehensive analysis of evolutionary characterization and expression for monosaccharide transporter family genes in nelumbo nucifera
publisher Frontiers Media S.A.
series Frontiers in Ecology and Evolution
issn 2296-701X
publishDate 2021-02-01
description Sugar transporters, an important class of transporters for sugar function, regulate many processes associated with growth, maturation, and senescence processes in plants. In this study, a total of 35 NuMSTs were identified in the Nelumbo nucifera genome and grouped by conserved domains and phylogenetic analysis. Additionally, we identified 316 MST genes in 10 other representative plants and performed a comparative analysis with Nelumbo nucifera genes, including evolutionary trajectory, gene duplication, and expression pattern. A large number of analyses across plants and algae indicated that the MST family could have originated from STP and Glct, expanding to form STP and SFP by dispersed duplication. Finally, a quantitative real-time polymerase chain reaction and cis-element analysis showed that some of them may be regulated by plant hormones (e.g., abscisic acid), biotic stress factors, and abiotic factors (e.g., drought, excessive cold, and light). We found that under the four abiotic stress conditions, only NuSTP5 expression was upregulated, generating a stress response, and ARBE and LTR were present in NuSTP5. In summary, our findings are significant for understanding and exploring the molecular evolution and mechanisms of NuMSTs in plants.
topic gene rentain
conserved synteny
evolutionary model
gene expression pattern analysis
abiotic stresses
url https://www.frontiersin.org/articles/10.3389/fevo.2021.537398/full
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