Comprehensive Analysis of Evolutionary Characterization and Expression for Monosaccharide Transporter Family Genes in Nelumbo nucifera
Sugar transporters, an important class of transporters for sugar function, regulate many processes associated with growth, maturation, and senescence processes in plants. In this study, a total of 35 NuMSTs were identified in the Nelumbo nucifera genome and grouped by conserved domains and phylogene...
Main Authors: | , , , |
---|---|
Format: | Article |
Language: | English |
Published: |
Frontiers Media S.A.
2021-02-01
|
Series: | Frontiers in Ecology and Evolution |
Subjects: | |
Online Access: | https://www.frontiersin.org/articles/10.3389/fevo.2021.537398/full |
id |
doaj-2f399af39637417dac365c44a0b6e858 |
---|---|
record_format |
Article |
spelling |
doaj-2f399af39637417dac365c44a0b6e8582021-02-15T05:58:23ZengFrontiers Media S.A.Frontiers in Ecology and Evolution2296-701X2021-02-01910.3389/fevo.2021.537398537398Comprehensive Analysis of Evolutionary Characterization and Expression for Monosaccharide Transporter Family Genes in Nelumbo nuciferaPeng Wu0Yongyan Zhang1Shuping Zhao2Liangjun Li3Liangjun Li4School of Horticulture and Plant Protection, Yangzhou University, Yangzhou, ChinaSchool of Horticulture and Plant Protection, Yangzhou University, Yangzhou, ChinaSchool of Horticulture and Plant Protection, Yangzhou University, Yangzhou, ChinaSchool of Horticulture and Plant Protection, Yangzhou University, Yangzhou, ChinaJoint International Research Laboratory of Agriculture and Agri-Product Safety of Ministry of Education of China, Yangzhou University, Yangzhou, ChinaSugar transporters, an important class of transporters for sugar function, regulate many processes associated with growth, maturation, and senescence processes in plants. In this study, a total of 35 NuMSTs were identified in the Nelumbo nucifera genome and grouped by conserved domains and phylogenetic analysis. Additionally, we identified 316 MST genes in 10 other representative plants and performed a comparative analysis with Nelumbo nucifera genes, including evolutionary trajectory, gene duplication, and expression pattern. A large number of analyses across plants and algae indicated that the MST family could have originated from STP and Glct, expanding to form STP and SFP by dispersed duplication. Finally, a quantitative real-time polymerase chain reaction and cis-element analysis showed that some of them may be regulated by plant hormones (e.g., abscisic acid), biotic stress factors, and abiotic factors (e.g., drought, excessive cold, and light). We found that under the four abiotic stress conditions, only NuSTP5 expression was upregulated, generating a stress response, and ARBE and LTR were present in NuSTP5. In summary, our findings are significant for understanding and exploring the molecular evolution and mechanisms of NuMSTs in plants.https://www.frontiersin.org/articles/10.3389/fevo.2021.537398/fullgene rentainconserved syntenyevolutionary modelgene expression pattern analysisabiotic stresses |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Peng Wu Yongyan Zhang Shuping Zhao Liangjun Li Liangjun Li |
spellingShingle |
Peng Wu Yongyan Zhang Shuping Zhao Liangjun Li Liangjun Li Comprehensive Analysis of Evolutionary Characterization and Expression for Monosaccharide Transporter Family Genes in Nelumbo nucifera Frontiers in Ecology and Evolution gene rentain conserved synteny evolutionary model gene expression pattern analysis abiotic stresses |
author_facet |
Peng Wu Yongyan Zhang Shuping Zhao Liangjun Li Liangjun Li |
author_sort |
Peng Wu |
title |
Comprehensive Analysis of Evolutionary Characterization and Expression for Monosaccharide Transporter Family Genes in Nelumbo nucifera |
title_short |
Comprehensive Analysis of Evolutionary Characterization and Expression for Monosaccharide Transporter Family Genes in Nelumbo nucifera |
title_full |
Comprehensive Analysis of Evolutionary Characterization and Expression for Monosaccharide Transporter Family Genes in Nelumbo nucifera |
title_fullStr |
Comprehensive Analysis of Evolutionary Characterization and Expression for Monosaccharide Transporter Family Genes in Nelumbo nucifera |
title_full_unstemmed |
Comprehensive Analysis of Evolutionary Characterization and Expression for Monosaccharide Transporter Family Genes in Nelumbo nucifera |
title_sort |
comprehensive analysis of evolutionary characterization and expression for monosaccharide transporter family genes in nelumbo nucifera |
publisher |
Frontiers Media S.A. |
series |
Frontiers in Ecology and Evolution |
issn |
2296-701X |
publishDate |
2021-02-01 |
description |
Sugar transporters, an important class of transporters for sugar function, regulate many processes associated with growth, maturation, and senescence processes in plants. In this study, a total of 35 NuMSTs were identified in the Nelumbo nucifera genome and grouped by conserved domains and phylogenetic analysis. Additionally, we identified 316 MST genes in 10 other representative plants and performed a comparative analysis with Nelumbo nucifera genes, including evolutionary trajectory, gene duplication, and expression pattern. A large number of analyses across plants and algae indicated that the MST family could have originated from STP and Glct, expanding to form STP and SFP by dispersed duplication. Finally, a quantitative real-time polymerase chain reaction and cis-element analysis showed that some of them may be regulated by plant hormones (e.g., abscisic acid), biotic stress factors, and abiotic factors (e.g., drought, excessive cold, and light). We found that under the four abiotic stress conditions, only NuSTP5 expression was upregulated, generating a stress response, and ARBE and LTR were present in NuSTP5. In summary, our findings are significant for understanding and exploring the molecular evolution and mechanisms of NuMSTs in plants. |
topic |
gene rentain conserved synteny evolutionary model gene expression pattern analysis abiotic stresses |
url |
https://www.frontiersin.org/articles/10.3389/fevo.2021.537398/full |
work_keys_str_mv |
AT pengwu comprehensiveanalysisofevolutionarycharacterizationandexpressionformonosaccharidetransporterfamilygenesinnelumbonucifera AT yongyanzhang comprehensiveanalysisofevolutionarycharacterizationandexpressionformonosaccharidetransporterfamilygenesinnelumbonucifera AT shupingzhao comprehensiveanalysisofevolutionarycharacterizationandexpressionformonosaccharidetransporterfamilygenesinnelumbonucifera AT liangjunli comprehensiveanalysisofevolutionarycharacterizationandexpressionformonosaccharidetransporterfamilygenesinnelumbonucifera AT liangjunli comprehensiveanalysisofevolutionarycharacterizationandexpressionformonosaccharidetransporterfamilygenesinnelumbonucifera |
_version_ |
1724269164687785984 |