Cardiac Phase Space Tomography: A novel method of assessing coronary artery disease utilizing machine learning.

BACKGROUND:Artificial intelligence (AI) techniques are increasingly applied to cardiovascular (CV) medicine in arenas ranging from genomics to cardiac imaging analysis. Cardiac Phase Space Tomography Analysis (cPSTA), employing machine-learned linear models from an elastic net method optimized by a...

Full description

Bibliographic Details
Main Authors: Thomas D Stuckey, Roger S Gammon, Robi Goswami, Jeremiah P Depta, John A Steuter, Frederick J Meine, Michael C Roberts, Narendra Singh, Shyam Ramchandani, Tim Burton, Paul Grouchy, Ali Khosousi, Ian Shadforth, William E Sanders
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2018-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC6082503?pdf=render
id doaj-2e0e1ad4baeb4cc5a62a1deff40038bf
record_format Article
spelling doaj-2e0e1ad4baeb4cc5a62a1deff40038bf2020-11-24T21:55:53ZengPublic Library of Science (PLoS)PLoS ONE1932-62032018-01-01138e019860310.1371/journal.pone.0198603Cardiac Phase Space Tomography: A novel method of assessing coronary artery disease utilizing machine learning.Thomas D StuckeyRoger S GammonRobi GoswamiJeremiah P DeptaJohn A SteuterFrederick J MeineMichael C RobertsNarendra SinghShyam RamchandaniTim BurtonPaul GrouchyAli KhosousiIan ShadforthWilliam E SandersBACKGROUND:Artificial intelligence (AI) techniques are increasingly applied to cardiovascular (CV) medicine in arenas ranging from genomics to cardiac imaging analysis. Cardiac Phase Space Tomography Analysis (cPSTA), employing machine-learned linear models from an elastic net method optimized by a genetic algorithm, analyzes thoracic phase signals to identify unique mathematical and tomographic features associated with the presence of flow-limiting coronary artery disease (CAD). This novel approach does not require radiation, contrast media, exercise, or pharmacological stress. The objective of this trial was to determine the diagnostic performance of cPSTA in assessing CAD in patients presenting with chest pain who had been referred by their physician for coronary angiography. METHODS:This prospective, multicenter, non-significant risk study was designed to: 1) develop machine-learned algorithms to assess the presence of CAD (defined as one or more ≥ 70% stenosis, or fractional flow reserve ≤ 0.80) and 2) test the accuracy of these algorithms prospectively in a naïve verification cohort. This report is an analysis of phase signals acquired from 606 subjects at rest just prior to angiography. From the collective phase signal data, features were extracted and paired with the known angiographic results. A development set, consisting of signals from 512 subjects, was used for machine learning to determine an algorithm that correlated with significant CAD. Verification testing of the algorithm was performed utilizing previously untested phase signals from 94 subjects. RESULTS:The machine-learned algorithm had a sensitivity of 92% (95% CI: 74%-100%) and specificity of 62% (95% CI: 51%-74%) on blind testing in the verification cohort. The negative predictive value (NPV) was 96% (95% CI: 85%-100%). CONCLUSIONS:These initial multicenter results suggest that resting cPSTA may have comparable diagnostic utility to functional tests currently used to assess CAD without requiring cardiac stress (exercise or pharmacological) or exposure of the patient to radioactivity.http://europepmc.org/articles/PMC6082503?pdf=render
collection DOAJ
language English
format Article
sources DOAJ
author Thomas D Stuckey
Roger S Gammon
Robi Goswami
Jeremiah P Depta
John A Steuter
Frederick J Meine
Michael C Roberts
Narendra Singh
Shyam Ramchandani
Tim Burton
Paul Grouchy
Ali Khosousi
Ian Shadforth
William E Sanders
spellingShingle Thomas D Stuckey
Roger S Gammon
Robi Goswami
Jeremiah P Depta
John A Steuter
Frederick J Meine
Michael C Roberts
Narendra Singh
Shyam Ramchandani
Tim Burton
Paul Grouchy
Ali Khosousi
Ian Shadforth
William E Sanders
Cardiac Phase Space Tomography: A novel method of assessing coronary artery disease utilizing machine learning.
PLoS ONE
author_facet Thomas D Stuckey
Roger S Gammon
Robi Goswami
Jeremiah P Depta
John A Steuter
Frederick J Meine
Michael C Roberts
Narendra Singh
Shyam Ramchandani
Tim Burton
Paul Grouchy
Ali Khosousi
Ian Shadforth
William E Sanders
author_sort Thomas D Stuckey
title Cardiac Phase Space Tomography: A novel method of assessing coronary artery disease utilizing machine learning.
title_short Cardiac Phase Space Tomography: A novel method of assessing coronary artery disease utilizing machine learning.
title_full Cardiac Phase Space Tomography: A novel method of assessing coronary artery disease utilizing machine learning.
title_fullStr Cardiac Phase Space Tomography: A novel method of assessing coronary artery disease utilizing machine learning.
title_full_unstemmed Cardiac Phase Space Tomography: A novel method of assessing coronary artery disease utilizing machine learning.
title_sort cardiac phase space tomography: a novel method of assessing coronary artery disease utilizing machine learning.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2018-01-01
description BACKGROUND:Artificial intelligence (AI) techniques are increasingly applied to cardiovascular (CV) medicine in arenas ranging from genomics to cardiac imaging analysis. Cardiac Phase Space Tomography Analysis (cPSTA), employing machine-learned linear models from an elastic net method optimized by a genetic algorithm, analyzes thoracic phase signals to identify unique mathematical and tomographic features associated with the presence of flow-limiting coronary artery disease (CAD). This novel approach does not require radiation, contrast media, exercise, or pharmacological stress. The objective of this trial was to determine the diagnostic performance of cPSTA in assessing CAD in patients presenting with chest pain who had been referred by their physician for coronary angiography. METHODS:This prospective, multicenter, non-significant risk study was designed to: 1) develop machine-learned algorithms to assess the presence of CAD (defined as one or more ≥ 70% stenosis, or fractional flow reserve ≤ 0.80) and 2) test the accuracy of these algorithms prospectively in a naïve verification cohort. This report is an analysis of phase signals acquired from 606 subjects at rest just prior to angiography. From the collective phase signal data, features were extracted and paired with the known angiographic results. A development set, consisting of signals from 512 subjects, was used for machine learning to determine an algorithm that correlated with significant CAD. Verification testing of the algorithm was performed utilizing previously untested phase signals from 94 subjects. RESULTS:The machine-learned algorithm had a sensitivity of 92% (95% CI: 74%-100%) and specificity of 62% (95% CI: 51%-74%) on blind testing in the verification cohort. The negative predictive value (NPV) was 96% (95% CI: 85%-100%). CONCLUSIONS:These initial multicenter results suggest that resting cPSTA may have comparable diagnostic utility to functional tests currently used to assess CAD without requiring cardiac stress (exercise or pharmacological) or exposure of the patient to radioactivity.
url http://europepmc.org/articles/PMC6082503?pdf=render
work_keys_str_mv AT thomasdstuckey cardiacphasespacetomographyanovelmethodofassessingcoronaryarterydiseaseutilizingmachinelearning
AT rogersgammon cardiacphasespacetomographyanovelmethodofassessingcoronaryarterydiseaseutilizingmachinelearning
AT robigoswami cardiacphasespacetomographyanovelmethodofassessingcoronaryarterydiseaseutilizingmachinelearning
AT jeremiahpdepta cardiacphasespacetomographyanovelmethodofassessingcoronaryarterydiseaseutilizingmachinelearning
AT johnasteuter cardiacphasespacetomographyanovelmethodofassessingcoronaryarterydiseaseutilizingmachinelearning
AT frederickjmeine cardiacphasespacetomographyanovelmethodofassessingcoronaryarterydiseaseutilizingmachinelearning
AT michaelcroberts cardiacphasespacetomographyanovelmethodofassessingcoronaryarterydiseaseutilizingmachinelearning
AT narendrasingh cardiacphasespacetomographyanovelmethodofassessingcoronaryarterydiseaseutilizingmachinelearning
AT shyamramchandani cardiacphasespacetomographyanovelmethodofassessingcoronaryarterydiseaseutilizingmachinelearning
AT timburton cardiacphasespacetomographyanovelmethodofassessingcoronaryarterydiseaseutilizingmachinelearning
AT paulgrouchy cardiacphasespacetomographyanovelmethodofassessingcoronaryarterydiseaseutilizingmachinelearning
AT alikhosousi cardiacphasespacetomographyanovelmethodofassessingcoronaryarterydiseaseutilizingmachinelearning
AT ianshadforth cardiacphasespacetomographyanovelmethodofassessingcoronaryarterydiseaseutilizingmachinelearning
AT williamesanders cardiacphasespacetomographyanovelmethodofassessingcoronaryarterydiseaseutilizingmachinelearning
_version_ 1725860762480541696