Physiological Analysis and Proteome Quantification of Alligator Weed Stems in Response to Potassium Deficiency Stress

The macronutrient potassium is essential to plant growth, development and stress response. Alligator weed (Alternanthera philoxeroides) has a high tolerance to potassium deficiency (LK) stress. The stem is the primary organ responsible for transporting molecules from the underground root system to t...

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Main Authors: Li-Qin Li, Cheng-Cheng Lyu, Jia-Hao Li, Zhu Tong, Yi-Fei Lu, Xi-Yao Wang, Su Ni, Shi-Min Yang, Fu-Chun Zeng, Li-Ming Lu
Format: Article
Language:English
Published: MDPI AG 2019-01-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:http://www.mdpi.com/1422-0067/20/1/221
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spelling doaj-2e045c56c1fd444b9790690af30d87362020-11-24T21:18:44ZengMDPI AGInternational Journal of Molecular Sciences1422-00672019-01-0120122110.3390/ijms20010221ijms20010221Physiological Analysis and Proteome Quantification of Alligator Weed Stems in Response to Potassium Deficiency StressLi-Qin Li0Cheng-Cheng Lyu1Jia-Hao Li2Zhu Tong3Yi-Fei Lu4Xi-Yao Wang5Su Ni6Shi-Min Yang7Fu-Chun Zeng8Li-Ming Lu9College of Agronomy, Sichuan Agriculture University, Chengdu 611130, ChinaCollege of Agronomy, Sichuan Agriculture University, Chengdu 611130, ChinaCollege of Agronomy, Sichuan Agriculture University, Chengdu 611130, ChinaCollege of Agronomy, Sichuan Agriculture University, Chengdu 611130, ChinaCollege of Agronomy, Sichuan Agriculture University, Chengdu 611130, ChinaCollege of Agronomy, Sichuan Agriculture University, Chengdu 611130, ChinaCollege of Agronomy, Sichuan Agriculture University, Chengdu 611130, ChinaCollege of Agronomy, Sichuan Agriculture University, Chengdu 611130, ChinaCollege of Agronomy, Sichuan Agriculture University, Chengdu 611130, ChinaCollege of Agronomy, Sichuan Agriculture University, Chengdu 611130, ChinaThe macronutrient potassium is essential to plant growth, development and stress response. Alligator weed (Alternanthera philoxeroides) has a high tolerance to potassium deficiency (LK) stress. The stem is the primary organ responsible for transporting molecules from the underground root system to the aboveground parts of the plant. However, proteomic changes in response to LK stress are largely unknown in alligator weed stems. In this study, we investigated the physiological and proteomic changes in alligator weed stems under LK stress. First, the chlorophyll and soluble protein content and SOD and POD activity were significantly altered after 15 days of LK treatment. The quantitative proteomic analysis suggested that a total of 296 proteins were differentially abundant proteins (DAPs). The functional annotation analysis revealed that LK stress elicited complex proteomic alterations that were involved in oxidative phosphorylation, plant-pathogen interactions, glycolysis/gluconeogenesis, sugar metabolism, and transport in stems. The subcellular locations analysis suggested 104 proteins showed chloroplastic localization, 81 proteins showed cytoplasmic localization and 40 showed nuclear localization. The protein–protein interaction analysis revealed that 56 proteins were involved in the interaction network, including 9 proteins involved in the ribosome network and 9 in the oxidative phosphorylation network. Additionally, the expressed changes of 5 DAPs were similar between the proteomic quantification analysis and the PRM-MS analysis, and the expression levels of eight genes that encode DAPs were further verified using an RT-qPCR analysis. These results provide valuable information on the adaptive mechanisms in alligator weed stems under LK stress and facilitate the development of efficient strategies for genetically engineering potassium-tolerant crops.http://www.mdpi.com/1422-0067/20/1/221Alternanthera philoxeroidesproteomicstempotassiumstress
collection DOAJ
language English
format Article
sources DOAJ
author Li-Qin Li
Cheng-Cheng Lyu
Jia-Hao Li
Zhu Tong
Yi-Fei Lu
Xi-Yao Wang
Su Ni
Shi-Min Yang
Fu-Chun Zeng
Li-Ming Lu
spellingShingle Li-Qin Li
Cheng-Cheng Lyu
Jia-Hao Li
Zhu Tong
Yi-Fei Lu
Xi-Yao Wang
Su Ni
Shi-Min Yang
Fu-Chun Zeng
Li-Ming Lu
Physiological Analysis and Proteome Quantification of Alligator Weed Stems in Response to Potassium Deficiency Stress
International Journal of Molecular Sciences
Alternanthera philoxeroides
proteomic
stem
potassium
stress
author_facet Li-Qin Li
Cheng-Cheng Lyu
Jia-Hao Li
Zhu Tong
Yi-Fei Lu
Xi-Yao Wang
Su Ni
Shi-Min Yang
Fu-Chun Zeng
Li-Ming Lu
author_sort Li-Qin Li
title Physiological Analysis and Proteome Quantification of Alligator Weed Stems in Response to Potassium Deficiency Stress
title_short Physiological Analysis and Proteome Quantification of Alligator Weed Stems in Response to Potassium Deficiency Stress
title_full Physiological Analysis and Proteome Quantification of Alligator Weed Stems in Response to Potassium Deficiency Stress
title_fullStr Physiological Analysis and Proteome Quantification of Alligator Weed Stems in Response to Potassium Deficiency Stress
title_full_unstemmed Physiological Analysis and Proteome Quantification of Alligator Weed Stems in Response to Potassium Deficiency Stress
title_sort physiological analysis and proteome quantification of alligator weed stems in response to potassium deficiency stress
publisher MDPI AG
series International Journal of Molecular Sciences
issn 1422-0067
publishDate 2019-01-01
description The macronutrient potassium is essential to plant growth, development and stress response. Alligator weed (Alternanthera philoxeroides) has a high tolerance to potassium deficiency (LK) stress. The stem is the primary organ responsible for transporting molecules from the underground root system to the aboveground parts of the plant. However, proteomic changes in response to LK stress are largely unknown in alligator weed stems. In this study, we investigated the physiological and proteomic changes in alligator weed stems under LK stress. First, the chlorophyll and soluble protein content and SOD and POD activity were significantly altered after 15 days of LK treatment. The quantitative proteomic analysis suggested that a total of 296 proteins were differentially abundant proteins (DAPs). The functional annotation analysis revealed that LK stress elicited complex proteomic alterations that were involved in oxidative phosphorylation, plant-pathogen interactions, glycolysis/gluconeogenesis, sugar metabolism, and transport in stems. The subcellular locations analysis suggested 104 proteins showed chloroplastic localization, 81 proteins showed cytoplasmic localization and 40 showed nuclear localization. The protein–protein interaction analysis revealed that 56 proteins were involved in the interaction network, including 9 proteins involved in the ribosome network and 9 in the oxidative phosphorylation network. Additionally, the expressed changes of 5 DAPs were similar between the proteomic quantification analysis and the PRM-MS analysis, and the expression levels of eight genes that encode DAPs were further verified using an RT-qPCR analysis. These results provide valuable information on the adaptive mechanisms in alligator weed stems under LK stress and facilitate the development of efficient strategies for genetically engineering potassium-tolerant crops.
topic Alternanthera philoxeroides
proteomic
stem
potassium
stress
url http://www.mdpi.com/1422-0067/20/1/221
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