Physiological Analysis and Proteome Quantification of Alligator Weed Stems in Response to Potassium Deficiency Stress
The macronutrient potassium is essential to plant growth, development and stress response. Alligator weed (Alternanthera philoxeroides) has a high tolerance to potassium deficiency (LK) stress. The stem is the primary organ responsible for transporting molecules from the underground root system to t...
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doaj-2e045c56c1fd444b9790690af30d87362020-11-24T21:18:44ZengMDPI AGInternational Journal of Molecular Sciences1422-00672019-01-0120122110.3390/ijms20010221ijms20010221Physiological Analysis and Proteome Quantification of Alligator Weed Stems in Response to Potassium Deficiency StressLi-Qin Li0Cheng-Cheng Lyu1Jia-Hao Li2Zhu Tong3Yi-Fei Lu4Xi-Yao Wang5Su Ni6Shi-Min Yang7Fu-Chun Zeng8Li-Ming Lu9College of Agronomy, Sichuan Agriculture University, Chengdu 611130, ChinaCollege of Agronomy, Sichuan Agriculture University, Chengdu 611130, ChinaCollege of Agronomy, Sichuan Agriculture University, Chengdu 611130, ChinaCollege of Agronomy, Sichuan Agriculture University, Chengdu 611130, ChinaCollege of Agronomy, Sichuan Agriculture University, Chengdu 611130, ChinaCollege of Agronomy, Sichuan Agriculture University, Chengdu 611130, ChinaCollege of Agronomy, Sichuan Agriculture University, Chengdu 611130, ChinaCollege of Agronomy, Sichuan Agriculture University, Chengdu 611130, ChinaCollege of Agronomy, Sichuan Agriculture University, Chengdu 611130, ChinaCollege of Agronomy, Sichuan Agriculture University, Chengdu 611130, ChinaThe macronutrient potassium is essential to plant growth, development and stress response. Alligator weed (Alternanthera philoxeroides) has a high tolerance to potassium deficiency (LK) stress. The stem is the primary organ responsible for transporting molecules from the underground root system to the aboveground parts of the plant. However, proteomic changes in response to LK stress are largely unknown in alligator weed stems. In this study, we investigated the physiological and proteomic changes in alligator weed stems under LK stress. First, the chlorophyll and soluble protein content and SOD and POD activity were significantly altered after 15 days of LK treatment. The quantitative proteomic analysis suggested that a total of 296 proteins were differentially abundant proteins (DAPs). The functional annotation analysis revealed that LK stress elicited complex proteomic alterations that were involved in oxidative phosphorylation, plant-pathogen interactions, glycolysis/gluconeogenesis, sugar metabolism, and transport in stems. The subcellular locations analysis suggested 104 proteins showed chloroplastic localization, 81 proteins showed cytoplasmic localization and 40 showed nuclear localization. The protein–protein interaction analysis revealed that 56 proteins were involved in the interaction network, including 9 proteins involved in the ribosome network and 9 in the oxidative phosphorylation network. Additionally, the expressed changes of 5 DAPs were similar between the proteomic quantification analysis and the PRM-MS analysis, and the expression levels of eight genes that encode DAPs were further verified using an RT-qPCR analysis. These results provide valuable information on the adaptive mechanisms in alligator weed stems under LK stress and facilitate the development of efficient strategies for genetically engineering potassium-tolerant crops.http://www.mdpi.com/1422-0067/20/1/221Alternanthera philoxeroidesproteomicstempotassiumstress |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Li-Qin Li Cheng-Cheng Lyu Jia-Hao Li Zhu Tong Yi-Fei Lu Xi-Yao Wang Su Ni Shi-Min Yang Fu-Chun Zeng Li-Ming Lu |
spellingShingle |
Li-Qin Li Cheng-Cheng Lyu Jia-Hao Li Zhu Tong Yi-Fei Lu Xi-Yao Wang Su Ni Shi-Min Yang Fu-Chun Zeng Li-Ming Lu Physiological Analysis and Proteome Quantification of Alligator Weed Stems in Response to Potassium Deficiency Stress International Journal of Molecular Sciences Alternanthera philoxeroides proteomic stem potassium stress |
author_facet |
Li-Qin Li Cheng-Cheng Lyu Jia-Hao Li Zhu Tong Yi-Fei Lu Xi-Yao Wang Su Ni Shi-Min Yang Fu-Chun Zeng Li-Ming Lu |
author_sort |
Li-Qin Li |
title |
Physiological Analysis and Proteome Quantification of Alligator Weed Stems in Response to Potassium Deficiency Stress |
title_short |
Physiological Analysis and Proteome Quantification of Alligator Weed Stems in Response to Potassium Deficiency Stress |
title_full |
Physiological Analysis and Proteome Quantification of Alligator Weed Stems in Response to Potassium Deficiency Stress |
title_fullStr |
Physiological Analysis and Proteome Quantification of Alligator Weed Stems in Response to Potassium Deficiency Stress |
title_full_unstemmed |
Physiological Analysis and Proteome Quantification of Alligator Weed Stems in Response to Potassium Deficiency Stress |
title_sort |
physiological analysis and proteome quantification of alligator weed stems in response to potassium deficiency stress |
publisher |
MDPI AG |
series |
International Journal of Molecular Sciences |
issn |
1422-0067 |
publishDate |
2019-01-01 |
description |
The macronutrient potassium is essential to plant growth, development and stress response. Alligator weed (Alternanthera philoxeroides) has a high tolerance to potassium deficiency (LK) stress. The stem is the primary organ responsible for transporting molecules from the underground root system to the aboveground parts of the plant. However, proteomic changes in response to LK stress are largely unknown in alligator weed stems. In this study, we investigated the physiological and proteomic changes in alligator weed stems under LK stress. First, the chlorophyll and soluble protein content and SOD and POD activity were significantly altered after 15 days of LK treatment. The quantitative proteomic analysis suggested that a total of 296 proteins were differentially abundant proteins (DAPs). The functional annotation analysis revealed that LK stress elicited complex proteomic alterations that were involved in oxidative phosphorylation, plant-pathogen interactions, glycolysis/gluconeogenesis, sugar metabolism, and transport in stems. The subcellular locations analysis suggested 104 proteins showed chloroplastic localization, 81 proteins showed cytoplasmic localization and 40 showed nuclear localization. The protein–protein interaction analysis revealed that 56 proteins were involved in the interaction network, including 9 proteins involved in the ribosome network and 9 in the oxidative phosphorylation network. Additionally, the expressed changes of 5 DAPs were similar between the proteomic quantification analysis and the PRM-MS analysis, and the expression levels of eight genes that encode DAPs were further verified using an RT-qPCR analysis. These results provide valuable information on the adaptive mechanisms in alligator weed stems under LK stress and facilitate the development of efficient strategies for genetically engineering potassium-tolerant crops. |
topic |
Alternanthera philoxeroides proteomic stem potassium stress |
url |
http://www.mdpi.com/1422-0067/20/1/221 |
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