Adiabatic dynamic causal modelling
This technical note introduces adiabatic dynamic causal modelling, a method for inferring slow changes in biophysical parameters that control fluctuations of fast neuronal states. The application domain we have in mind is inferring slow changes in variables (e.g., extracellular ion concentrations or...
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2021-09-01
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doaj-2cd27781d2fd4d1b8062b8d18dbabe922021-07-25T04:42:06ZengElsevierNeuroImage1095-95722021-09-01238118243Adiabatic dynamic causal modellingAmirhossein Jafarian0Peter Zeidman1Rob. C Wykes2Matthew Walker3Karl J. Friston4Cambridge Centre for Frontotemporal Dementia and Related Disorders, Department of Clinical Neurosciences, University of Cambridge, UK; The Wellcome Centre for Human Neuroimaging, UCL Queen Square Institute of Neurology, UK; Corresponding author at: Cambridge Centre for Frontotemporal Dementia and Related Disorders, Department of Clinical Neurosciences, University of Cambridge, Herchel Smith Building, Forvie Site, Robinson Way, Cambridge Biomedical Campus, Cambridge CB2 0SZ, UK.The Wellcome Centre for Human Neuroimaging, UCL Queen Square Institute of Neurology, UKDepartment of Clinical & Experimental Epilepsy, UCL Queen Square Institute of Neurology, UK; Nanomedicine Lab, University of Manchester, UKDepartment of Clinical & Experimental Epilepsy, UCL Queen Square Institute of Neurology, UKThe Wellcome Centre for Human Neuroimaging, UCL Queen Square Institute of Neurology, UKThis technical note introduces adiabatic dynamic causal modelling, a method for inferring slow changes in biophysical parameters that control fluctuations of fast neuronal states. The application domain we have in mind is inferring slow changes in variables (e.g., extracellular ion concentrations or synaptic efficacy) that underlie phase transitions in brain activity (e.g., paroxysmal seizure activity). The scheme is efficient and yet retains a biophysical interpretation, in virtue of being based on established neural mass models that are equipped with a slow dynamic on the parameters (such as synaptic rate constants or effective connectivity). In brief, we use an adiabatic approximation to summarise fast fluctuations in hidden neuronal states (and their expression in sensors) in terms of their second order statistics; namely, their complex cross spectra. This allows one to specify and compare models of slowly changing parameters (using Bayesian model reduction) that generate a sequence of empirical cross spectra of electrophysiological recordings. Crucially, we use the slow fluctuations in the spectral power of neuronal activity as empirical priors on changes in synaptic parameters. This introduces a circular causality, in which synaptic parameters underwrite fast neuronal activity that, in turn, induces activity-dependent plasticity in synaptic parameters. In this foundational paper, we describe the underlying model, establish its face validity using simulations and provide an illustrative application to a chemoconvulsant animal model of seizure activity.http://www.sciencedirect.com/science/article/pii/S1053811921005206Dynamic causal modellingCross spectral densityPhase transitionAdiabatic approximationBayesian model selectionBayesian model reduction |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Amirhossein Jafarian Peter Zeidman Rob. C Wykes Matthew Walker Karl J. Friston |
spellingShingle |
Amirhossein Jafarian Peter Zeidman Rob. C Wykes Matthew Walker Karl J. Friston Adiabatic dynamic causal modelling NeuroImage Dynamic causal modelling Cross spectral density Phase transition Adiabatic approximation Bayesian model selection Bayesian model reduction |
author_facet |
Amirhossein Jafarian Peter Zeidman Rob. C Wykes Matthew Walker Karl J. Friston |
author_sort |
Amirhossein Jafarian |
title |
Adiabatic dynamic causal modelling |
title_short |
Adiabatic dynamic causal modelling |
title_full |
Adiabatic dynamic causal modelling |
title_fullStr |
Adiabatic dynamic causal modelling |
title_full_unstemmed |
Adiabatic dynamic causal modelling |
title_sort |
adiabatic dynamic causal modelling |
publisher |
Elsevier |
series |
NeuroImage |
issn |
1095-9572 |
publishDate |
2021-09-01 |
description |
This technical note introduces adiabatic dynamic causal modelling, a method for inferring slow changes in biophysical parameters that control fluctuations of fast neuronal states. The application domain we have in mind is inferring slow changes in variables (e.g., extracellular ion concentrations or synaptic efficacy) that underlie phase transitions in brain activity (e.g., paroxysmal seizure activity). The scheme is efficient and yet retains a biophysical interpretation, in virtue of being based on established neural mass models that are equipped with a slow dynamic on the parameters (such as synaptic rate constants or effective connectivity). In brief, we use an adiabatic approximation to summarise fast fluctuations in hidden neuronal states (and their expression in sensors) in terms of their second order statistics; namely, their complex cross spectra. This allows one to specify and compare models of slowly changing parameters (using Bayesian model reduction) that generate a sequence of empirical cross spectra of electrophysiological recordings. Crucially, we use the slow fluctuations in the spectral power of neuronal activity as empirical priors on changes in synaptic parameters. This introduces a circular causality, in which synaptic parameters underwrite fast neuronal activity that, in turn, induces activity-dependent plasticity in synaptic parameters. In this foundational paper, we describe the underlying model, establish its face validity using simulations and provide an illustrative application to a chemoconvulsant animal model of seizure activity. |
topic |
Dynamic causal modelling Cross spectral density Phase transition Adiabatic approximation Bayesian model selection Bayesian model reduction |
url |
http://www.sciencedirect.com/science/article/pii/S1053811921005206 |
work_keys_str_mv |
AT amirhosseinjafarian adiabaticdynamiccausalmodelling AT peterzeidman adiabaticdynamiccausalmodelling AT robcwykes adiabaticdynamiccausalmodelling AT matthewwalker adiabaticdynamiccausalmodelling AT karljfriston adiabaticdynamiccausalmodelling |
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