Crystal structure and molecular docking study of (E)-2-{[(E)-2-hydroxy-5-methylbenzylidene]hydrazinylidene}-1,2-diphenylethan-1-one

The title compound, C22H18N2O2, is a Schiff base that exists in the phenol–imine tautomeric form and adopts an E configuration with respect to the C=N bond. The molecular structure is stabilized by an O—H...N hydrogen bond, forming an S(6) ring motif. In the crystal, pairs of C—H...O hydrogen bonds...

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Main Authors: Sevgi Kansiz, Digdem Tatlidil, Necmi Dege, Feyzi Alkim Aktas, Samir Osman Mohammed Al-Asbahy, Aysen Alaman Agar
Format: Article
Language:English
Published: International Union of Crystallography 2021-06-01
Series:Acta Crystallographica Section E: Crystallographic Communications
Subjects:
Online Access:http://scripts.iucr.org/cgi-bin/paper?S2056989021005442
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spelling doaj-2c3d15b445064fac93d4fc03b05c66ca2021-06-07T14:20:00ZengInternational Union of CrystallographyActa Crystallographica Section E: Crystallographic Communications2056-98902021-06-0177665866210.1107/S2056989021005442yk2152Crystal structure and molecular docking study of (E)-2-{[(E)-2-hydroxy-5-methylbenzylidene]hydrazinylidene}-1,2-diphenylethan-1-oneSevgi Kansiz0Digdem Tatlidil1Necmi Dege2Feyzi Alkim Aktas3Samir Osman Mohammed Al-Asbahy4Aysen Alaman Agar5Samsun University, Faculty of Engineering, Department of Fundamental Sciences, 55420, Samsun, TurkeyOndokuz Mayıs University, Faculty of Arts and Sciences, Department of Chemistry, 55139, Samsun, TurkeyOndokuz Mayıs University, Faculty of Arts and Sciences, Department of Physics, 55139, Samsun, TurkeySamsun University, Faculty of Engineering, Biomedical Engineering, 55420, Samsun, TurkeyIbb University, Science College, Department of Physics, Ibb, YemenOndokuz Mayıs University, Faculty of Arts and Sciences, Department of Chemistry, 55139, Samsun, TurkeyThe title compound, C22H18N2O2, is a Schiff base that exists in the phenol–imine tautomeric form and adopts an E configuration with respect to the C=N bond. The molecular structure is stabilized by an O—H...N hydrogen bond, forming an S(6) ring motif. In the crystal, pairs of C—H...O hydrogen bonds link the molecules to form inversion dimers. Weak π–π stacking interactions along the a-axis direction provide additional stabilization of the crystal structure. The molecule is non-planar, the aromatic ring of the benzaldehyde residue being nearly perpendicular to the phenyl and 4-methylphenol rings with dihedral angles of 88.78 (13) and 82.26 (14)°, respectively. A molecular docking study between the title molecule and the COVID-19 main protease (PDB ID: 6LU7) was performed, showing that it is a potential agent because of its affinity and ability to adhere to the active sites of the protein.http://scripts.iucr.org/cgi-bin/paper?S2056989021005442crystal structureschiff basediphenylethanmolecular dockingcovid-19 main protease
collection DOAJ
language English
format Article
sources DOAJ
author Sevgi Kansiz
Digdem Tatlidil
Necmi Dege
Feyzi Alkim Aktas
Samir Osman Mohammed Al-Asbahy
Aysen Alaman Agar
spellingShingle Sevgi Kansiz
Digdem Tatlidil
Necmi Dege
Feyzi Alkim Aktas
Samir Osman Mohammed Al-Asbahy
Aysen Alaman Agar
Crystal structure and molecular docking study of (E)-2-{[(E)-2-hydroxy-5-methylbenzylidene]hydrazinylidene}-1,2-diphenylethan-1-one
Acta Crystallographica Section E: Crystallographic Communications
crystal structure
schiff base
diphenylethan
molecular docking
covid-19 main protease
author_facet Sevgi Kansiz
Digdem Tatlidil
Necmi Dege
Feyzi Alkim Aktas
Samir Osman Mohammed Al-Asbahy
Aysen Alaman Agar
author_sort Sevgi Kansiz
title Crystal structure and molecular docking study of (E)-2-{[(E)-2-hydroxy-5-methylbenzylidene]hydrazinylidene}-1,2-diphenylethan-1-one
title_short Crystal structure and molecular docking study of (E)-2-{[(E)-2-hydroxy-5-methylbenzylidene]hydrazinylidene}-1,2-diphenylethan-1-one
title_full Crystal structure and molecular docking study of (E)-2-{[(E)-2-hydroxy-5-methylbenzylidene]hydrazinylidene}-1,2-diphenylethan-1-one
title_fullStr Crystal structure and molecular docking study of (E)-2-{[(E)-2-hydroxy-5-methylbenzylidene]hydrazinylidene}-1,2-diphenylethan-1-one
title_full_unstemmed Crystal structure and molecular docking study of (E)-2-{[(E)-2-hydroxy-5-methylbenzylidene]hydrazinylidene}-1,2-diphenylethan-1-one
title_sort crystal structure and molecular docking study of (e)-2-{[(e)-2-hydroxy-5-methylbenzylidene]hydrazinylidene}-1,2-diphenylethan-1-one
publisher International Union of Crystallography
series Acta Crystallographica Section E: Crystallographic Communications
issn 2056-9890
publishDate 2021-06-01
description The title compound, C22H18N2O2, is a Schiff base that exists in the phenol–imine tautomeric form and adopts an E configuration with respect to the C=N bond. The molecular structure is stabilized by an O—H...N hydrogen bond, forming an S(6) ring motif. In the crystal, pairs of C—H...O hydrogen bonds link the molecules to form inversion dimers. Weak π–π stacking interactions along the a-axis direction provide additional stabilization of the crystal structure. The molecule is non-planar, the aromatic ring of the benzaldehyde residue being nearly perpendicular to the phenyl and 4-methylphenol rings with dihedral angles of 88.78 (13) and 82.26 (14)°, respectively. A molecular docking study between the title molecule and the COVID-19 main protease (PDB ID: 6LU7) was performed, showing that it is a potential agent because of its affinity and ability to adhere to the active sites of the protein.
topic crystal structure
schiff base
diphenylethan
molecular docking
covid-19 main protease
url http://scripts.iucr.org/cgi-bin/paper?S2056989021005442
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