An Illustrative Analysis of Atypical Gas Production Profiles Obtained from In Vitro Digestibility Studies Using Fecal Inoculum

Gas production profiles typically show a monotonically increasing monophasic pattern. However, atypical gas production profiles exist whereby at least two consecutive phases of gas production or additional extraneous features that distort the typical profile are present. Such profiles are more likel...

Full description

Bibliographic Details
Main Authors: Mewa S. Dhanoa, Secundino López, Christopher D. Powell, Ruth Sanderson, Jennifer L. Ellis, Jo-Anne M. D. Murray, Anna Garber, Barbara A. Williams, James France
Format: Article
Language:English
Published: MDPI AG 2021-04-01
Series:Animals
Subjects:
Online Access:https://www.mdpi.com/2076-2615/11/4/1069
id doaj-2bd2fccc83f44ab5a249e99514745394
record_format Article
spelling doaj-2bd2fccc83f44ab5a249e995147453942021-04-09T23:05:56ZengMDPI AGAnimals2076-26152021-04-01111069106910.3390/ani11041069An Illustrative Analysis of Atypical Gas Production Profiles Obtained from In Vitro Digestibility Studies Using Fecal InoculumMewa S. Dhanoa0Secundino López1Christopher D. Powell2Ruth Sanderson3Jennifer L. Ellis4Jo-Anne M. D. Murray5Anna Garber6Barbara A. Williams7James France8Department of Animal BioSci.s, University of Guelph, Guelph, ON N1G 2W1, CanadaDepartamento de Producción Animal, Universidad de León, 24007 León, SpainDepartment of Animal BioSci.s, University of Guelph, Guelph, ON N1G 2W1, CanadaInstitute of Biological, Environmental and Rural Sciences, Aberystwyth University, Aberystwyth SY23 3EB, UKDepartment of Animal BioSci.s, University of Guelph, Guelph, ON N1G 2W1, CanadaCollege of Medical, Veterinary and Life Sci.s, School of Veterinary Medicine, University of Glasgow, Glasgow G61 1QH, UKCollege of Medical, Veterinary and Life Sci.s, School of Veterinary Medicine, University of Glasgow, Glasgow G61 1QH, UKCentre for Nutrition and Food Sciences, Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, St. Lucia, QLD 4072, AustraliaDepartment of Animal BioSci.s, University of Guelph, Guelph, ON N1G 2W1, CanadaGas production profiles typically show a monotonically increasing monophasic pattern. However, atypical gas production profiles exist whereby at least two consecutive phases of gas production or additional extraneous features that distort the typical profile are present. Such profiles are more likely to occur with the use of a fecal inoculum and are much less well described. The presence of multiple phases or non-descript extraneous features makes it difficult to apply directly recommended modeling approaches such as standard response functions or classical growth functions. To overcome such difficulties, extensions of the Mitscherlich equation and a numerical modeling option also based on the Mitscherlich are explored. The numerical modeling option uses an estimate of relative rate obtained from the smoothed data profile and an estimate of maximum gas produced together with any lag time information drawn from the raw data to construct a simple Mitscherlich equation. In summary, this article illustrates the analysis of atypical gas production profiles obtained using a fecal inoculum and explores the methodology of numerical modeling to reconstruct equivalent typical growth-like trends.https://www.mdpi.com/2076-2615/11/4/1069gas production techniquefeedstuff evaluationMitscherlich equationatypical profilesnumerical modelingequivalent profile construction
collection DOAJ
language English
format Article
sources DOAJ
author Mewa S. Dhanoa
Secundino López
Christopher D. Powell
Ruth Sanderson
Jennifer L. Ellis
Jo-Anne M. D. Murray
Anna Garber
Barbara A. Williams
James France
spellingShingle Mewa S. Dhanoa
Secundino López
Christopher D. Powell
Ruth Sanderson
Jennifer L. Ellis
Jo-Anne M. D. Murray
Anna Garber
Barbara A. Williams
James France
An Illustrative Analysis of Atypical Gas Production Profiles Obtained from In Vitro Digestibility Studies Using Fecal Inoculum
Animals
gas production technique
feedstuff evaluation
Mitscherlich equation
atypical profiles
numerical modeling
equivalent profile construction
author_facet Mewa S. Dhanoa
Secundino López
Christopher D. Powell
Ruth Sanderson
Jennifer L. Ellis
Jo-Anne M. D. Murray
Anna Garber
Barbara A. Williams
James France
author_sort Mewa S. Dhanoa
title An Illustrative Analysis of Atypical Gas Production Profiles Obtained from In Vitro Digestibility Studies Using Fecal Inoculum
title_short An Illustrative Analysis of Atypical Gas Production Profiles Obtained from In Vitro Digestibility Studies Using Fecal Inoculum
title_full An Illustrative Analysis of Atypical Gas Production Profiles Obtained from In Vitro Digestibility Studies Using Fecal Inoculum
title_fullStr An Illustrative Analysis of Atypical Gas Production Profiles Obtained from In Vitro Digestibility Studies Using Fecal Inoculum
title_full_unstemmed An Illustrative Analysis of Atypical Gas Production Profiles Obtained from In Vitro Digestibility Studies Using Fecal Inoculum
title_sort illustrative analysis of atypical gas production profiles obtained from in vitro digestibility studies using fecal inoculum
publisher MDPI AG
series Animals
issn 2076-2615
publishDate 2021-04-01
description Gas production profiles typically show a monotonically increasing monophasic pattern. However, atypical gas production profiles exist whereby at least two consecutive phases of gas production or additional extraneous features that distort the typical profile are present. Such profiles are more likely to occur with the use of a fecal inoculum and are much less well described. The presence of multiple phases or non-descript extraneous features makes it difficult to apply directly recommended modeling approaches such as standard response functions or classical growth functions. To overcome such difficulties, extensions of the Mitscherlich equation and a numerical modeling option also based on the Mitscherlich are explored. The numerical modeling option uses an estimate of relative rate obtained from the smoothed data profile and an estimate of maximum gas produced together with any lag time information drawn from the raw data to construct a simple Mitscherlich equation. In summary, this article illustrates the analysis of atypical gas production profiles obtained using a fecal inoculum and explores the methodology of numerical modeling to reconstruct equivalent typical growth-like trends.
topic gas production technique
feedstuff evaluation
Mitscherlich equation
atypical profiles
numerical modeling
equivalent profile construction
url https://www.mdpi.com/2076-2615/11/4/1069
work_keys_str_mv AT mewasdhanoa anillustrativeanalysisofatypicalgasproductionprofilesobtainedfrominvitrodigestibilitystudiesusingfecalinoculum
AT secundinolopez anillustrativeanalysisofatypicalgasproductionprofilesobtainedfrominvitrodigestibilitystudiesusingfecalinoculum
AT christopherdpowell anillustrativeanalysisofatypicalgasproductionprofilesobtainedfrominvitrodigestibilitystudiesusingfecalinoculum
AT ruthsanderson anillustrativeanalysisofatypicalgasproductionprofilesobtainedfrominvitrodigestibilitystudiesusingfecalinoculum
AT jenniferlellis anillustrativeanalysisofatypicalgasproductionprofilesobtainedfrominvitrodigestibilitystudiesusingfecalinoculum
AT joannemdmurray anillustrativeanalysisofatypicalgasproductionprofilesobtainedfrominvitrodigestibilitystudiesusingfecalinoculum
AT annagarber anillustrativeanalysisofatypicalgasproductionprofilesobtainedfrominvitrodigestibilitystudiesusingfecalinoculum
AT barbaraawilliams anillustrativeanalysisofatypicalgasproductionprofilesobtainedfrominvitrodigestibilitystudiesusingfecalinoculum
AT jamesfrance anillustrativeanalysisofatypicalgasproductionprofilesobtainedfrominvitrodigestibilitystudiesusingfecalinoculum
AT mewasdhanoa illustrativeanalysisofatypicalgasproductionprofilesobtainedfrominvitrodigestibilitystudiesusingfecalinoculum
AT secundinolopez illustrativeanalysisofatypicalgasproductionprofilesobtainedfrominvitrodigestibilitystudiesusingfecalinoculum
AT christopherdpowell illustrativeanalysisofatypicalgasproductionprofilesobtainedfrominvitrodigestibilitystudiesusingfecalinoculum
AT ruthsanderson illustrativeanalysisofatypicalgasproductionprofilesobtainedfrominvitrodigestibilitystudiesusingfecalinoculum
AT jenniferlellis illustrativeanalysisofatypicalgasproductionprofilesobtainedfrominvitrodigestibilitystudiesusingfecalinoculum
AT joannemdmurray illustrativeanalysisofatypicalgasproductionprofilesobtainedfrominvitrodigestibilitystudiesusingfecalinoculum
AT annagarber illustrativeanalysisofatypicalgasproductionprofilesobtainedfrominvitrodigestibilitystudiesusingfecalinoculum
AT barbaraawilliams illustrativeanalysisofatypicalgasproductionprofilesobtainedfrominvitrodigestibilitystudiesusingfecalinoculum
AT jamesfrance illustrativeanalysisofatypicalgasproductionprofilesobtainedfrominvitrodigestibilitystudiesusingfecalinoculum
_version_ 1721532032404684800