Developmental validation of FaSTR™ DNA: Software for the analysis of forensic DNA profiles

The analysis of forensic DNA profiles is complicated by the presence of undesirable artefactual peaks such as stutter, pull-up, and dye blobs. We describe the developmental validation of FaSTR™ DNA analysis software, which can assist with the streamlined analysis of forensic DNA profiles. A total of...

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Main Authors: Meng-Han Lin, Shan-I Lee, Xinlong Zhang, Laura Russell, Hannah Kelly, Kevin Cheng, Stuart Cooper, Richard Wivell, Zane Kerr, Judi Morawitz, Jo-Anne Bright
Format: Article
Language:English
Published: Elsevier 2021-07-01
Series:Forensic Science International: Reports
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2665910721000487
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spelling doaj-2b65a3ca9e7045a6938bca4374019c582021-08-12T04:35:43ZengElsevierForensic Science International: Reports2665-91072021-07-013100217Developmental validation of FaSTR™ DNA: Software for the analysis of forensic DNA profilesMeng-Han Lin0Shan-I Lee1Xinlong Zhang2Laura Russell3Hannah Kelly4Kevin Cheng5Stuart Cooper6Richard Wivell7Zane Kerr8Judi Morawitz9Jo-Anne Bright10Corresponding author.; Institute of Environmental Science and Research Limited, Private Bag 92021, Auckland 1142 New ZealandInstitute of Environmental Science and Research Limited, Private Bag 92021, Auckland 1142 New ZealandInstitute of Environmental Science and Research Limited, Private Bag 92021, Auckland 1142 New ZealandInstitute of Environmental Science and Research Limited, Private Bag 92021, Auckland 1142 New ZealandInstitute of Environmental Science and Research Limited, Private Bag 92021, Auckland 1142 New ZealandInstitute of Environmental Science and Research Limited, Private Bag 92021, Auckland 1142 New ZealandInstitute of Environmental Science and Research Limited, Private Bag 92021, Auckland 1142 New ZealandInstitute of Environmental Science and Research Limited, Private Bag 92021, Auckland 1142 New ZealandInstitute of Environmental Science and Research Limited, Private Bag 92021, Auckland 1142 New ZealandInstitute of Environmental Science and Research Limited, Private Bag 92021, Auckland 1142 New ZealandInstitute of Environmental Science and Research Limited, Private Bag 92021, Auckland 1142 New ZealandThe analysis of forensic DNA profiles is complicated by the presence of undesirable artefactual peaks such as stutter, pull-up, and dye blobs. We describe the developmental validation of FaSTR™ DNA analysis software, which can assist with the streamlined analysis of forensic DNA profiles. A total of 3403 single-source and mixed DNA profiles generated using seven different STR profiling kits were analysed in FaSTR™ DNA. Results were compared with outputs from GeneMapper™ ID-X analysis software. Over 99.95% of peak designations were concordant, corresponding to over 232,000 peaks. There were no significant differences found in peak size however differences in peak height were observed between the software programmes. Peaks greater than 1000 rfu were generally taller in GeneMapper™ ID-X than in FaSTR™ DNA. At lower peak heights, peaks were often taller in FaSTR™ DNA, due to differences in how each software applies baseline correction to the electropherogram. Allele-specific stutter filters in FaSTR™ DNA correctly designated 99.3% of stutter peaks analysed (5174 peaks comprising four stutter types) in 265 single-source GlobalFiler™ profiles. FaSTR™ DNA was shown to be effective for its intended use as analysis software for the designation of alleles and the identification of artefacts such as stutter, pull-up, and spikes.http://www.sciencedirect.com/science/article/pii/S2665910721000487DNA typingDNA analysisDevelopmental ValidationDNA profilingAnalysis Software
collection DOAJ
language English
format Article
sources DOAJ
author Meng-Han Lin
Shan-I Lee
Xinlong Zhang
Laura Russell
Hannah Kelly
Kevin Cheng
Stuart Cooper
Richard Wivell
Zane Kerr
Judi Morawitz
Jo-Anne Bright
spellingShingle Meng-Han Lin
Shan-I Lee
Xinlong Zhang
Laura Russell
Hannah Kelly
Kevin Cheng
Stuart Cooper
Richard Wivell
Zane Kerr
Judi Morawitz
Jo-Anne Bright
Developmental validation of FaSTR™ DNA: Software for the analysis of forensic DNA profiles
Forensic Science International: Reports
DNA typing
DNA analysis
Developmental Validation
DNA profiling
Analysis Software
author_facet Meng-Han Lin
Shan-I Lee
Xinlong Zhang
Laura Russell
Hannah Kelly
Kevin Cheng
Stuart Cooper
Richard Wivell
Zane Kerr
Judi Morawitz
Jo-Anne Bright
author_sort Meng-Han Lin
title Developmental validation of FaSTR™ DNA: Software for the analysis of forensic DNA profiles
title_short Developmental validation of FaSTR™ DNA: Software for the analysis of forensic DNA profiles
title_full Developmental validation of FaSTR™ DNA: Software for the analysis of forensic DNA profiles
title_fullStr Developmental validation of FaSTR™ DNA: Software for the analysis of forensic DNA profiles
title_full_unstemmed Developmental validation of FaSTR™ DNA: Software for the analysis of forensic DNA profiles
title_sort developmental validation of fastr™ dna: software for the analysis of forensic dna profiles
publisher Elsevier
series Forensic Science International: Reports
issn 2665-9107
publishDate 2021-07-01
description The analysis of forensic DNA profiles is complicated by the presence of undesirable artefactual peaks such as stutter, pull-up, and dye blobs. We describe the developmental validation of FaSTR™ DNA analysis software, which can assist with the streamlined analysis of forensic DNA profiles. A total of 3403 single-source and mixed DNA profiles generated using seven different STR profiling kits were analysed in FaSTR™ DNA. Results were compared with outputs from GeneMapper™ ID-X analysis software. Over 99.95% of peak designations were concordant, corresponding to over 232,000 peaks. There were no significant differences found in peak size however differences in peak height were observed between the software programmes. Peaks greater than 1000 rfu were generally taller in GeneMapper™ ID-X than in FaSTR™ DNA. At lower peak heights, peaks were often taller in FaSTR™ DNA, due to differences in how each software applies baseline correction to the electropherogram. Allele-specific stutter filters in FaSTR™ DNA correctly designated 99.3% of stutter peaks analysed (5174 peaks comprising four stutter types) in 265 single-source GlobalFiler™ profiles. FaSTR™ DNA was shown to be effective for its intended use as analysis software for the designation of alleles and the identification of artefacts such as stutter, pull-up, and spikes.
topic DNA typing
DNA analysis
Developmental Validation
DNA profiling
Analysis Software
url http://www.sciencedirect.com/science/article/pii/S2665910721000487
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