Metabolomics diagnostic approach to mustard airway diseases: a preliminary study
Objective(s): This study aims to evaluate combined proton nuclear magnetic resonance (1H NMR) spectroscopy and gas chromatography-mass spectrometry (GC-MS) metabolic profiling approaches, for discriminating between mustard airway diseases (MADs) and healthy controls and for providing biochemical inf...
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doaj-2a9200b42b7f450d86338b0ee4eb76c72020-11-24T22:05:06ZengMashhad University of Medical SciencesIranian Journal of Basic Medical Sciences 2008-38662008-38742018-01-01211596910.22038/ijbms.2017.23792.59829924Metabolomics diagnostic approach to mustard airway diseases: a preliminary studyBiBi Fatemeh Nobakht Mothlagh Ghoochani0Rasoul Aliannejad1Afsaneh Arefi Oskuei2Mostafa Rezaei-Tavirani3Shiva Kalantari4Mohammad Taghi Naseri5Alireza Bagheban6Hadi Parastar7Ghazale Aliakbarzadeh8Department of Basic Medical Sciences, Neyshabur University of Medical Sciences, Neyshabur, IranPulmonary Department, Shariati Hospital, Tehran University of Medical Sciences, Tehran, IranDepartment of Basic Sciences, Faculty of Paramedical Sciences, Shahid Beheshti University of Medical Sciences, Tehran, IranProteomics Research Center, Faculty of Paramedical Sciences, Shahid Beheshti University of Medical Sciences, Tehran, IranChronic Kidney Disease Research Center, Labbafinejad Hospital, Shahid Beheshti University of Medical Sciences, Tehran, IranDepartment of Chemistry, Faculty of Sciences, Tarbiat Modares University, Tehran, IranPhysiotherapy Research Center, School of Rehabilitation, Shahid Beheshti University of Medical Sciences, Tehran, IranDepartment of Chemistry, Sharif University of Technology, Tehran, IranDepartment of Chemistry, Faculty of Science, University of Tehran, Tehran, IranObjective(s): This study aims to evaluate combined proton nuclear magnetic resonance (1H NMR) spectroscopy and gas chromatography-mass spectrometry (GC-MS) metabolic profiling approaches, for discriminating between mustard airway diseases (MADs) and healthy controls and for providing biochemical information on this disease. Materials and Methods: In the present study, analysis of serum samples collected from 17 MAD subjects and 12 healthy controls was performed using NMR. Of these subjects, 14 (8 patients and 6 controls) were analyzed by GC-MS. Then, their spectral profiles were subjected to principal component analysis (PCA) and orthogonal partial least squares regression discriminant analysis (OPLS-DA). Results: A panel of twenty eight metabolite biomarkers was generated for MADs, sixteen NMR-derived metabolites (3-methyl-2-oxovaleric acid, 3-hydroxyisobutyrate, lactic acid, lysine, glutamic acid, proline, hydroxyproline, dimethylamine, creatine, citrulline, choline, acetic acid, acetoacetate, cholesterol, alanine, and lipid (mainly VLDL)) and twelve GC-MS-derived metabolites (threonine, phenylalanine, citric acid, myristic acid, pentadecanoic acid, tyrosine, arachidonic acid, lactic acid, propionic acid, 3-hydroxybutyric acid, linoleic acid, and oleic acid). This composite biomarker panel could effectively discriminate MAD subjects from healthy controls, achieving an area under receiver operating characteristic curve (AUC) values of 1 and 0.79 for NMR and GC-MS, respectively. Conclusion: In the present study, a robust panel of twenty-eight biomarkers for detecting MADs was established. This panel is involved in three metabolic pathways including aminoacyl-tRNA biosynthesis, arginine, and proline metabolism, and synthesis and degradation of ketone bodies, and could differentiate MAD subjects from healthy controls with a higher accuracy.http://ijbms.mums.ac.ir/article_9924_68e116fbf106b759dd44ce3e151908a6.pdfGC-MSMetabolomicsMultivariate analysisNMR spectroscopySulfur mustard |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
BiBi Fatemeh Nobakht Mothlagh Ghoochani Rasoul Aliannejad Afsaneh Arefi Oskuei Mostafa Rezaei-Tavirani Shiva Kalantari Mohammad Taghi Naseri Alireza Bagheban Hadi Parastar Ghazale Aliakbarzadeh |
spellingShingle |
BiBi Fatemeh Nobakht Mothlagh Ghoochani Rasoul Aliannejad Afsaneh Arefi Oskuei Mostafa Rezaei-Tavirani Shiva Kalantari Mohammad Taghi Naseri Alireza Bagheban Hadi Parastar Ghazale Aliakbarzadeh Metabolomics diagnostic approach to mustard airway diseases: a preliminary study Iranian Journal of Basic Medical Sciences GC-MS Metabolomics Multivariate analysis NMR spectroscopy Sulfur mustard |
author_facet |
BiBi Fatemeh Nobakht Mothlagh Ghoochani Rasoul Aliannejad Afsaneh Arefi Oskuei Mostafa Rezaei-Tavirani Shiva Kalantari Mohammad Taghi Naseri Alireza Bagheban Hadi Parastar Ghazale Aliakbarzadeh |
author_sort |
BiBi Fatemeh Nobakht Mothlagh Ghoochani |
title |
Metabolomics diagnostic approach to mustard airway diseases: a preliminary study |
title_short |
Metabolomics diagnostic approach to mustard airway diseases: a preliminary study |
title_full |
Metabolomics diagnostic approach to mustard airway diseases: a preliminary study |
title_fullStr |
Metabolomics diagnostic approach to mustard airway diseases: a preliminary study |
title_full_unstemmed |
Metabolomics diagnostic approach to mustard airway diseases: a preliminary study |
title_sort |
metabolomics diagnostic approach to mustard airway diseases: a preliminary study |
publisher |
Mashhad University of Medical Sciences |
series |
Iranian Journal of Basic Medical Sciences |
issn |
2008-3866 2008-3874 |
publishDate |
2018-01-01 |
description |
Objective(s): This study aims to evaluate combined proton nuclear magnetic resonance (1H NMR) spectroscopy and gas chromatography-mass spectrometry (GC-MS) metabolic profiling approaches, for discriminating between mustard airway diseases (MADs) and healthy controls and for providing biochemical information on this disease. Materials and Methods: In the present study, analysis of serum samples collected from 17 MAD subjects and 12 healthy controls was performed using NMR. Of these subjects, 14 (8 patients and 6 controls) were analyzed by GC-MS. Then, their spectral profiles were subjected to principal component analysis (PCA) and orthogonal partial least squares regression discriminant analysis (OPLS-DA). Results: A panel of twenty eight metabolite biomarkers was generated for MADs, sixteen NMR-derived metabolites (3-methyl-2-oxovaleric acid, 3-hydroxyisobutyrate, lactic acid, lysine, glutamic acid, proline, hydroxyproline, dimethylamine, creatine, citrulline, choline, acetic acid, acetoacetate, cholesterol, alanine, and lipid (mainly VLDL)) and twelve GC-MS-derived metabolites (threonine, phenylalanine, citric acid, myristic acid, pentadecanoic acid, tyrosine, arachidonic acid, lactic acid, propionic acid, 3-hydroxybutyric acid, linoleic acid, and oleic acid). This composite biomarker panel could effectively discriminate MAD subjects from healthy controls, achieving an area under receiver operating characteristic curve (AUC) values of 1 and 0.79 for NMR and GC-MS, respectively. Conclusion: In the present study, a robust panel of twenty-eight biomarkers for detecting MADs was established. This panel is involved in three metabolic pathways including aminoacyl-tRNA biosynthesis, arginine, and proline metabolism, and synthesis and degradation of ketone bodies, and could differentiate MAD subjects from healthy controls with a higher accuracy. |
topic |
GC-MS Metabolomics Multivariate analysis NMR spectroscopy Sulfur mustard |
url |
http://ijbms.mums.ac.ir/article_9924_68e116fbf106b759dd44ce3e151908a6.pdf |
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