Coex-Rank: An approach incorporating co-expression information for combined analysis of microarray data

Coex-Rank: An approach incorporating co-expression information for combined analysis of microarray data

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Microarrays have been widely used to study differential gene expression at the genomic level. They can also provide genome-wide co-expression information. Biologically related datasets from independent studies are publicly available, which requires robust combined approaches for integration and vali...

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Main Authors: Cai Jinlu, Keen Henry L., Sigmund Curt D., Casavant Thomas L.
Format: Article
Language:English
Published: De Gruyter 2012-03-01
Series:Journal of Integrative Bioinformatics
Online Access:http://www.degruyter.com/view/j/jib.2012.9.issue-1/biecoll-jib-2012-208/biecoll-jib-2012-208.xml?format=INT
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spelling doaj-2a62574e0034417b943b74518eb80ac22020-11-25T00:27:50ZengDe GruyterJournal of Integrative Bioinformatics1613-45162012-03-0191324310.1515/jib-2012-208biecoll-jib-2012-208Coex-Rank: An approach incorporating co-expression information for combined analysis of microarray dataCai Jinlu0Keen Henry L.1Sigmund Curt D.2Casavant Thomas L.3Genetics Department, Albert Einstein College of Medicine, New York, New York, 10461, United States of AmericaDepartment of Pharmacology, The University of Iowa, Iowa City, IA, 52242, United States of AmericaDepartment of Pharmacology, The University of Iowa, Iowa City, IA, 52242 United States of AmericaDepartment of Electrical and Computer Engineering, The University of Iowa, Iowa City, IA, 52242 United States of AmericaMicroarrays have been widely used to study differential gene expression at the genomic level. They can also provide genome-wide co-expression information. Biologically related datasets from independent studies are publicly available, which requires robust combined approaches for integration and validation. Previously, meta-analysis has been adopted to solve this problem.http://www.degruyter.com/view/j/jib.2012.9.issue-1/biecoll-jib-2012-208/biecoll-jib-2012-208.xml?format=INT
collection DOAJ
language English
format Article
sources DOAJ
author Cai Jinlu
Keen Henry L.
Sigmund Curt D.
Casavant Thomas L.
spellingShingle Cai Jinlu
Keen Henry L.
Sigmund Curt D.
Casavant Thomas L.
Coex-Rank: An approach incorporating co-expression information for combined analysis of microarray data
Journal of Integrative Bioinformatics
author_facet Cai Jinlu
Keen Henry L.
Sigmund Curt D.
Casavant Thomas L.
author_sort Cai Jinlu
title Coex-Rank: An approach incorporating co-expression information for combined analysis of microarray data
title_short Coex-Rank: An approach incorporating co-expression information for combined analysis of microarray data
title_full Coex-Rank: An approach incorporating co-expression information for combined analysis of microarray data
title_fullStr Coex-Rank: An approach incorporating co-expression information for combined analysis of microarray data
title_full_unstemmed Coex-Rank: An approach incorporating co-expression information for combined analysis of microarray data
title_sort coex-rank: an approach incorporating co-expression information for combined analysis of microarray data
publisher De Gruyter
series Journal of Integrative Bioinformatics
issn 1613-4516
publishDate 2012-03-01
description Microarrays have been widely used to study differential gene expression at the genomic level. They can also provide genome-wide co-expression information. Biologically related datasets from independent studies are publicly available, which requires robust combined approaches for integration and validation. Previously, meta-analysis has been adopted to solve this problem.
url http://www.degruyter.com/view/j/jib.2012.9.issue-1/biecoll-jib-2012-208/biecoll-jib-2012-208.xml?format=INT
work_keys_str_mv AT caijinlu coexrankanapproachincorporatingcoexpressioninformationforcombinedanalysisofmicroarraydata
AT keenhenryl coexrankanapproachincorporatingcoexpressioninformationforcombinedanalysisofmicroarraydata
AT sigmundcurtd coexrankanapproachincorporatingcoexpressioninformationforcombinedanalysisofmicroarraydata
AT casavantthomasl coexrankanapproachincorporatingcoexpressioninformationforcombinedanalysisofmicroarraydata
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