Riboflavin Biosynthesis and Overproduction by a Derivative of the Human Gut Commensal Bifidobacterium longum subsp. infantis ATCC 15697

Riboflavin or vitamin B2 is the precursor of the essential coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD). Despite increased interest in microbial synthesis of this water-soluble vitamin, the metabolic pathway for riboflavin biosynthesis has been characterized in just a...

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Main Authors: Ana Solopova, Francesca Bottacini, Elena Venturi degli Esposti, Alberto Amaretti, Stefano Raimondi, Maddalena Rossi, Douwe van Sinderen
Format: Article
Language:English
Published: Frontiers Media S.A. 2020-09-01
Series:Frontiers in Microbiology
Subjects:
Online Access:https://www.frontiersin.org/article/10.3389/fmicb.2020.573335/full
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spelling doaj-2a0b75d22f834287a3acff5441e31e782020-11-25T03:14:04ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2020-09-011110.3389/fmicb.2020.573335573335Riboflavin Biosynthesis and Overproduction by a Derivative of the Human Gut Commensal Bifidobacterium longum subsp. infantis ATCC 15697Ana Solopova0Francesca Bottacini1Elena Venturi degli Esposti2Alberto Amaretti3Alberto Amaretti4Stefano Raimondi5Maddalena Rossi6Maddalena Rossi7Douwe van Sinderen8Douwe van Sinderen9APC Microbiome Ireland, University College Cork, Cork, IrelandAPC Microbiome Ireland, University College Cork, Cork, IrelandDepartment of Chemistry, University of Modena and Reggio Emilia, Modena, ItalyDepartment of Chemistry, University of Modena and Reggio Emilia, Modena, ItalyBIOGEST-SITEIA, University of Modena and Reggio Emilia, Modena, ItalyDepartment of Chemistry, University of Modena and Reggio Emilia, Modena, ItalyDepartment of Chemistry, University of Modena and Reggio Emilia, Modena, ItalyBIOGEST-SITEIA, University of Modena and Reggio Emilia, Modena, ItalyAPC Microbiome Ireland, University College Cork, Cork, IrelandSchool of Microbiology, University College Cork, Cork, IrelandRiboflavin or vitamin B2 is the precursor of the essential coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD). Despite increased interest in microbial synthesis of this water-soluble vitamin, the metabolic pathway for riboflavin biosynthesis has been characterized in just a handful of bacteria. Here, comparative genome analysis identified the genes involved in the de novo biosynthetic pathway of riboflavin in certain bifidobacterial species, including the human gut commensal Bifidobacterium longum subsp. infantis (B. infantis) ATCC 15697. Using comparative genomics and phylogenomic analysis, we investigated the evolutionary acquisition route of the riboflavin biosynthesis or rib gene cluster in Bifidobacterium and the distribution of riboflavin biosynthesis-associated genes across the genus. Using B. infantis ATCC 15697 as model organism for this pathway, we isolated spontaneous riboflavin overproducers, which had lost transcriptional regulation of the genes required for riboflavin biosynthesis. Among them, one mutant was shown to allow riboflavin release into the medium to a concentration of 60.8 ng mL–1. This mutant increased vitamin B2 concentration in a fecal fermentation system, thus providing promising data for application of this isolate as a functional food ingredient.https://www.frontiersin.org/article/10.3389/fmicb.2020.573335/fullprobioticvitamin B2gut commensalvitamin biosynthesishealth benefit
collection DOAJ
language English
format Article
sources DOAJ
author Ana Solopova
Francesca Bottacini
Elena Venturi degli Esposti
Alberto Amaretti
Alberto Amaretti
Stefano Raimondi
Maddalena Rossi
Maddalena Rossi
Douwe van Sinderen
Douwe van Sinderen
spellingShingle Ana Solopova
Francesca Bottacini
Elena Venturi degli Esposti
Alberto Amaretti
Alberto Amaretti
Stefano Raimondi
Maddalena Rossi
Maddalena Rossi
Douwe van Sinderen
Douwe van Sinderen
Riboflavin Biosynthesis and Overproduction by a Derivative of the Human Gut Commensal Bifidobacterium longum subsp. infantis ATCC 15697
Frontiers in Microbiology
probiotic
vitamin B2
gut commensal
vitamin biosynthesis
health benefit
author_facet Ana Solopova
Francesca Bottacini
Elena Venturi degli Esposti
Alberto Amaretti
Alberto Amaretti
Stefano Raimondi
Maddalena Rossi
Maddalena Rossi
Douwe van Sinderen
Douwe van Sinderen
author_sort Ana Solopova
title Riboflavin Biosynthesis and Overproduction by a Derivative of the Human Gut Commensal Bifidobacterium longum subsp. infantis ATCC 15697
title_short Riboflavin Biosynthesis and Overproduction by a Derivative of the Human Gut Commensal Bifidobacterium longum subsp. infantis ATCC 15697
title_full Riboflavin Biosynthesis and Overproduction by a Derivative of the Human Gut Commensal Bifidobacterium longum subsp. infantis ATCC 15697
title_fullStr Riboflavin Biosynthesis and Overproduction by a Derivative of the Human Gut Commensal Bifidobacterium longum subsp. infantis ATCC 15697
title_full_unstemmed Riboflavin Biosynthesis and Overproduction by a Derivative of the Human Gut Commensal Bifidobacterium longum subsp. infantis ATCC 15697
title_sort riboflavin biosynthesis and overproduction by a derivative of the human gut commensal bifidobacterium longum subsp. infantis atcc 15697
publisher Frontiers Media S.A.
series Frontiers in Microbiology
issn 1664-302X
publishDate 2020-09-01
description Riboflavin or vitamin B2 is the precursor of the essential coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD). Despite increased interest in microbial synthesis of this water-soluble vitamin, the metabolic pathway for riboflavin biosynthesis has been characterized in just a handful of bacteria. Here, comparative genome analysis identified the genes involved in the de novo biosynthetic pathway of riboflavin in certain bifidobacterial species, including the human gut commensal Bifidobacterium longum subsp. infantis (B. infantis) ATCC 15697. Using comparative genomics and phylogenomic analysis, we investigated the evolutionary acquisition route of the riboflavin biosynthesis or rib gene cluster in Bifidobacterium and the distribution of riboflavin biosynthesis-associated genes across the genus. Using B. infantis ATCC 15697 as model organism for this pathway, we isolated spontaneous riboflavin overproducers, which had lost transcriptional regulation of the genes required for riboflavin biosynthesis. Among them, one mutant was shown to allow riboflavin release into the medium to a concentration of 60.8 ng mL–1. This mutant increased vitamin B2 concentration in a fecal fermentation system, thus providing promising data for application of this isolate as a functional food ingredient.
topic probiotic
vitamin B2
gut commensal
vitamin biosynthesis
health benefit
url https://www.frontiersin.org/article/10.3389/fmicb.2020.573335/full
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