Simultaneous detection of ompW and ctxA gene of Vibrio cholera isolated from ice used for marine product preservative by Duplex Polymerase Chain Reaction assay (dPCR)

<p><strong>Background: </strong>Cholera is an infectious disease with symptom rice water stool diarrhea caused by <em>Vibrio cholerae</em>. Cholera transmitted by water or contaminated seafood. Ice usually used as a preservative marine products which vulnerable to conta...

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Main Authors: Annisa Putri Cahyani, I Gede Putu Wirawan, I Dewa Made Sukrama
Format: Article
Language:English
Published: DiscoverSys 2017-02-01
Series:Bali Medical Journal
Subjects:
Online Access:https://balimedicaljournal.org/index.php/bmj/article/view/409
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spelling doaj-27f596375c214c8d93d298174d2591d12020-11-25T01:58:47ZengDiscoverSysBali Medical Journal2089-11802302-29142017-02-016114314610.15562/bmj.v6i1.409280Simultaneous detection of ompW and ctxA gene of Vibrio cholera isolated from ice used for marine product preservative by Duplex Polymerase Chain Reaction assay (dPCR)Annisa Putri Cahyani0I Gede Putu Wirawan1I Dewa Made Sukrama2Master Student of Biotechnology, Udayana UniversityLaboratory of Genetic Resources and Biology Molecular, Udayana UniversityDepartement of Clinical Microbiology, Faculty of Medicine Udayana University, Bali Indonesia<p><strong>Background: </strong>Cholera is an infectious disease with symptom rice water stool diarrhea caused by <em>Vibrio cholerae</em>. Cholera transmitted by water or contaminated seafood. Ice usually used as a preservative marine products which vulnerable to contamination. <strong>Objective:</strong> This study aimed to determine the bacterial contamination of <em>V. cholerae</em> carrying the <em>ompW</em> and <em>ctxA</em> genes on ice preservatives marine product in Kedonganan Fish Market, Badung-Bali. <strong>Method: </strong>This study used 3 samples of ice that has not been used to preserve marine products and 20 samples of ice that has been used to preserve marine products. Samples were examined using bacterial culture methods and followed by dPCR assay to detect <em>ompW</em> and <em>ctxA </em>genes. <strong>Result: </strong>The results showed all samples of ice that has not been used preservative marine products are not contaminated by <em>V. cholerae</em>, while 16 of 20 (80%) samples of ice that had used contaminated by <em>V. cholerae</em> based on <em>ompW</em> gene and found no samples that carry <em>ctxA</em> gene. <strong>Conclusion: </strong>Ice agent (EA) was not contaminated by <em>V. cholerae</em>, while use ice sample marine product preservative contaminated with <em>V. cholerae</em> with 80% positive and  none of  isolates carry the gene <em>ctxA</em>.</p>https://balimedicaljournal.org/index.php/bmj/article/view/409vibrio cholerae, ompw, ctxa, duplex polymerase chain reaction
collection DOAJ
language English
format Article
sources DOAJ
author Annisa Putri Cahyani
I Gede Putu Wirawan
I Dewa Made Sukrama
spellingShingle Annisa Putri Cahyani
I Gede Putu Wirawan
I Dewa Made Sukrama
Simultaneous detection of ompW and ctxA gene of Vibrio cholera isolated from ice used for marine product preservative by Duplex Polymerase Chain Reaction assay (dPCR)
Bali Medical Journal
vibrio cholerae, ompw, ctxa, duplex polymerase chain reaction
author_facet Annisa Putri Cahyani
I Gede Putu Wirawan
I Dewa Made Sukrama
author_sort Annisa Putri Cahyani
title Simultaneous detection of ompW and ctxA gene of Vibrio cholera isolated from ice used for marine product preservative by Duplex Polymerase Chain Reaction assay (dPCR)
title_short Simultaneous detection of ompW and ctxA gene of Vibrio cholera isolated from ice used for marine product preservative by Duplex Polymerase Chain Reaction assay (dPCR)
title_full Simultaneous detection of ompW and ctxA gene of Vibrio cholera isolated from ice used for marine product preservative by Duplex Polymerase Chain Reaction assay (dPCR)
title_fullStr Simultaneous detection of ompW and ctxA gene of Vibrio cholera isolated from ice used for marine product preservative by Duplex Polymerase Chain Reaction assay (dPCR)
title_full_unstemmed Simultaneous detection of ompW and ctxA gene of Vibrio cholera isolated from ice used for marine product preservative by Duplex Polymerase Chain Reaction assay (dPCR)
title_sort simultaneous detection of ompw and ctxa gene of vibrio cholera isolated from ice used for marine product preservative by duplex polymerase chain reaction assay (dpcr)
publisher DiscoverSys
series Bali Medical Journal
issn 2089-1180
2302-2914
publishDate 2017-02-01
description <p><strong>Background: </strong>Cholera is an infectious disease with symptom rice water stool diarrhea caused by <em>Vibrio cholerae</em>. Cholera transmitted by water or contaminated seafood. Ice usually used as a preservative marine products which vulnerable to contamination. <strong>Objective:</strong> This study aimed to determine the bacterial contamination of <em>V. cholerae</em> carrying the <em>ompW</em> and <em>ctxA</em> genes on ice preservatives marine product in Kedonganan Fish Market, Badung-Bali. <strong>Method: </strong>This study used 3 samples of ice that has not been used to preserve marine products and 20 samples of ice that has been used to preserve marine products. Samples were examined using bacterial culture methods and followed by dPCR assay to detect <em>ompW</em> and <em>ctxA </em>genes. <strong>Result: </strong>The results showed all samples of ice that has not been used preservative marine products are not contaminated by <em>V. cholerae</em>, while 16 of 20 (80%) samples of ice that had used contaminated by <em>V. cholerae</em> based on <em>ompW</em> gene and found no samples that carry <em>ctxA</em> gene. <strong>Conclusion: </strong>Ice agent (EA) was not contaminated by <em>V. cholerae</em>, while use ice sample marine product preservative contaminated with <em>V. cholerae</em> with 80% positive and  none of  isolates carry the gene <em>ctxA</em>.</p>
topic vibrio cholerae, ompw, ctxa, duplex polymerase chain reaction
url https://balimedicaljournal.org/index.php/bmj/article/view/409
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