A spectral graph regression model for learning brain connectivity of Alzheimer's disease.

Understanding network features of brain pathology is essential to reveal underpinnings of neurodegenerative diseases. In this paper, we introduce a novel graph regression model (GRM) for learning structural brain connectivity of Alzheimer's disease (AD) measured by amyloid-β deposits. The propo...

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Main Authors: Chenhui Hu, Lin Cheng, Jorge Sepulcre, Keith A Johnson, Georges E Fakhri, Yue M Lu, Quanzheng Li
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2015-01-01
Series:PLoS ONE
Online Access:https://doi.org/10.1371/journal.pone.0128136
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spelling doaj-2781eac364b7473bb3f38d080a02edfe2021-03-04T11:39:11ZengPublic Library of Science (PLoS)PLoS ONE1932-62032015-01-01105e012813610.1371/journal.pone.0128136A spectral graph regression model for learning brain connectivity of Alzheimer's disease.Chenhui HuLin ChengJorge SepulcreKeith A JohnsonGeorges E FakhriYue M LuQuanzheng LiUnderstanding network features of brain pathology is essential to reveal underpinnings of neurodegenerative diseases. In this paper, we introduce a novel graph regression model (GRM) for learning structural brain connectivity of Alzheimer's disease (AD) measured by amyloid-β deposits. The proposed GRM regards 11C-labeled Pittsburgh Compound-B (PiB) positron emission tomography (PET) imaging data as smooth signals defined on an unknown graph. This graph is then estimated through an optimization framework, which fits the graph to the data with an adjustable level of uniformity of the connection weights. Under the assumed data model, results based on simulated data illustrate that our approach can accurately reconstruct the underlying network, often with better reconstruction than those obtained by both sample correlation and ℓ1-regularized partial correlation estimation. Evaluations performed upon PiB-PET imaging data of 30 AD and 40 elderly normal control (NC) subjects demonstrate that the connectivity patterns revealed by the GRM are easy to interpret and consistent with known pathology. Moreover, the hubs of the reconstructed networks match the cortical hubs given by functional MRI. The discriminative network features including both global connectivity measurements and degree statistics of specific nodes discovered from the AD and NC amyloid-beta networks provide new potential biomarkers for preclinical and clinical AD.https://doi.org/10.1371/journal.pone.0128136
collection DOAJ
language English
format Article
sources DOAJ
author Chenhui Hu
Lin Cheng
Jorge Sepulcre
Keith A Johnson
Georges E Fakhri
Yue M Lu
Quanzheng Li
spellingShingle Chenhui Hu
Lin Cheng
Jorge Sepulcre
Keith A Johnson
Georges E Fakhri
Yue M Lu
Quanzheng Li
A spectral graph regression model for learning brain connectivity of Alzheimer's disease.
PLoS ONE
author_facet Chenhui Hu
Lin Cheng
Jorge Sepulcre
Keith A Johnson
Georges E Fakhri
Yue M Lu
Quanzheng Li
author_sort Chenhui Hu
title A spectral graph regression model for learning brain connectivity of Alzheimer's disease.
title_short A spectral graph regression model for learning brain connectivity of Alzheimer's disease.
title_full A spectral graph regression model for learning brain connectivity of Alzheimer's disease.
title_fullStr A spectral graph regression model for learning brain connectivity of Alzheimer's disease.
title_full_unstemmed A spectral graph regression model for learning brain connectivity of Alzheimer's disease.
title_sort spectral graph regression model for learning brain connectivity of alzheimer's disease.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2015-01-01
description Understanding network features of brain pathology is essential to reveal underpinnings of neurodegenerative diseases. In this paper, we introduce a novel graph regression model (GRM) for learning structural brain connectivity of Alzheimer's disease (AD) measured by amyloid-β deposits. The proposed GRM regards 11C-labeled Pittsburgh Compound-B (PiB) positron emission tomography (PET) imaging data as smooth signals defined on an unknown graph. This graph is then estimated through an optimization framework, which fits the graph to the data with an adjustable level of uniformity of the connection weights. Under the assumed data model, results based on simulated data illustrate that our approach can accurately reconstruct the underlying network, often with better reconstruction than those obtained by both sample correlation and ℓ1-regularized partial correlation estimation. Evaluations performed upon PiB-PET imaging data of 30 AD and 40 elderly normal control (NC) subjects demonstrate that the connectivity patterns revealed by the GRM are easy to interpret and consistent with known pathology. Moreover, the hubs of the reconstructed networks match the cortical hubs given by functional MRI. The discriminative network features including both global connectivity measurements and degree statistics of specific nodes discovered from the AD and NC amyloid-beta networks provide new potential biomarkers for preclinical and clinical AD.
url https://doi.org/10.1371/journal.pone.0128136
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