Comparative analysis of time-based and quadrat sampling in seasonal population dynamics of intermediate hosts of human schistosomes.

<h4>Background</h4>Despite their importance for designing and evaluating schistosomiasis control trials, little attention in the literature has been dedicated to sampling protocols for the parasite's snail intermediate hosts since their first development. We propose a comparative an...

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Main Authors: Javier Perez-Saez, Théophile Mande, Dramane Zongo, Andrea Rinaldo
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2019-12-01
Series:PLoS Neglected Tropical Diseases
Online Access:https://doi.org/10.1371/journal.pntd.0007938
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spelling doaj-275708e886aa4721abd9fe5467468f302021-03-03T08:25:28ZengPublic Library of Science (PLoS)PLoS Neglected Tropical Diseases1935-27271935-27352019-12-011312e000793810.1371/journal.pntd.0007938Comparative analysis of time-based and quadrat sampling in seasonal population dynamics of intermediate hosts of human schistosomes.Javier Perez-SaezThéophile MandeDramane ZongoAndrea Rinaldo<h4>Background</h4>Despite their importance for designing and evaluating schistosomiasis control trials, little attention in the literature has been dedicated to sampling protocols for the parasite's snail intermediate hosts since their first development. We propose a comparative analysis of time-based and quadrat sampling protocols to quantify the seasonal variations in the abundance of these aquatic snail species of medical importance.<h4>Methodology/principal findings</h4>Snail populations were monitored during 42 consecutive months in three types of habitats (ephemeral pond, ephemeral river and permanent stream) in two sites covering different climatic zones in Burkina Faso. We employed both a widely used time-based protocol of 30min of systematic collection at a weekly interval, and a quadrat protocol of 8 replicates per sample at a monthly interval. The correspondence between the two protocols was evaluated using an ensemble of statistical models including linear and saturating-type functional forms as well as allowing for count zero-inflation. The quadrat protocol yielded on average a relative standard error of 40%, for a mean snail density of 16.7 snails/m2 and index of dispersion of 1.51. Both protocols yielded similar seasonal patterns in snail abundance, confirming the asynchrony between permanent and ephemeral habitats with respect to the country's seasonal rainfall patterns. Formal model comparison of the link between time vs. quadrat counts showed strong support of saturation for the latter and measurement zero-inflation, providing important evidence for the presence of density feedbacks in the snail's population dynamics, as well as for spatial clustering.<h4>Conclusions/significance</h4>In addition to the agreement with the time-based method, quadrat sampling provided insight into snail population dynamics and comparable density estimates across sites. The re-evaluation of these "traditional" sampling protocols, as well as the correspondence between their outputs, is of practical importance for the design and evaluation of schistosomiasis control trials.https://doi.org/10.1371/journal.pntd.0007938
collection DOAJ
language English
format Article
sources DOAJ
author Javier Perez-Saez
Théophile Mande
Dramane Zongo
Andrea Rinaldo
spellingShingle Javier Perez-Saez
Théophile Mande
Dramane Zongo
Andrea Rinaldo
Comparative analysis of time-based and quadrat sampling in seasonal population dynamics of intermediate hosts of human schistosomes.
PLoS Neglected Tropical Diseases
author_facet Javier Perez-Saez
Théophile Mande
Dramane Zongo
Andrea Rinaldo
author_sort Javier Perez-Saez
title Comparative analysis of time-based and quadrat sampling in seasonal population dynamics of intermediate hosts of human schistosomes.
title_short Comparative analysis of time-based and quadrat sampling in seasonal population dynamics of intermediate hosts of human schistosomes.
title_full Comparative analysis of time-based and quadrat sampling in seasonal population dynamics of intermediate hosts of human schistosomes.
title_fullStr Comparative analysis of time-based and quadrat sampling in seasonal population dynamics of intermediate hosts of human schistosomes.
title_full_unstemmed Comparative analysis of time-based and quadrat sampling in seasonal population dynamics of intermediate hosts of human schistosomes.
title_sort comparative analysis of time-based and quadrat sampling in seasonal population dynamics of intermediate hosts of human schistosomes.
publisher Public Library of Science (PLoS)
series PLoS Neglected Tropical Diseases
issn 1935-2727
1935-2735
publishDate 2019-12-01
description <h4>Background</h4>Despite their importance for designing and evaluating schistosomiasis control trials, little attention in the literature has been dedicated to sampling protocols for the parasite's snail intermediate hosts since their first development. We propose a comparative analysis of time-based and quadrat sampling protocols to quantify the seasonal variations in the abundance of these aquatic snail species of medical importance.<h4>Methodology/principal findings</h4>Snail populations were monitored during 42 consecutive months in three types of habitats (ephemeral pond, ephemeral river and permanent stream) in two sites covering different climatic zones in Burkina Faso. We employed both a widely used time-based protocol of 30min of systematic collection at a weekly interval, and a quadrat protocol of 8 replicates per sample at a monthly interval. The correspondence between the two protocols was evaluated using an ensemble of statistical models including linear and saturating-type functional forms as well as allowing for count zero-inflation. The quadrat protocol yielded on average a relative standard error of 40%, for a mean snail density of 16.7 snails/m2 and index of dispersion of 1.51. Both protocols yielded similar seasonal patterns in snail abundance, confirming the asynchrony between permanent and ephemeral habitats with respect to the country's seasonal rainfall patterns. Formal model comparison of the link between time vs. quadrat counts showed strong support of saturation for the latter and measurement zero-inflation, providing important evidence for the presence of density feedbacks in the snail's population dynamics, as well as for spatial clustering.<h4>Conclusions/significance</h4>In addition to the agreement with the time-based method, quadrat sampling provided insight into snail population dynamics and comparable density estimates across sites. The re-evaluation of these "traditional" sampling protocols, as well as the correspondence between their outputs, is of practical importance for the design and evaluation of schistosomiasis control trials.
url https://doi.org/10.1371/journal.pntd.0007938
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