3 minutes to precisely measure morphogen concentration.

Morphogen gradients provide concentration-dependent positional information along polarity axes. Although the dynamics of the establishment of these gradients is well described, precision and noise in the downstream activation processes remain elusive. A simple paradigm to address these questions is...

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Main Authors: Tanguy Lucas, Huy Tran, Carmina Angelica Perez Romero, Aurélien Guillou, Cécile Fradin, Mathieu Coppey, Aleksandra M Walczak, Nathalie Dostatni
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2018-10-01
Series:PLoS Genetics
Online Access:http://europepmc.org/articles/PMC6221364?pdf=render
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spelling doaj-273de3a8a9b04a698b0014d6dff34ebf2020-11-25T00:15:14ZengPublic Library of Science (PLoS)PLoS Genetics1553-73901553-74042018-10-011410e100767610.1371/journal.pgen.10076763 minutes to precisely measure morphogen concentration.Tanguy LucasHuy TranCarmina Angelica Perez RomeroAurélien GuillouCécile FradinMathieu CoppeyAleksandra M WalczakNathalie DostatniMorphogen gradients provide concentration-dependent positional information along polarity axes. Although the dynamics of the establishment of these gradients is well described, precision and noise in the downstream activation processes remain elusive. A simple paradigm to address these questions is the Bicoid morphogen gradient that elicits a rapid step-like transcriptional response in young fruit fly embryos. Focusing on the expression of the major Bicoid target, hunchback (hb), at the onset of zygotic transcription, we used the MS2-MCP approach which combines fluorescent labeling of nascent mRNA with live imaging at high spatial and temporal resolution. Removing 36 putative Zelda binding sites unexpectedly present in the original MS2 reporter, we show that the 750 bp of the hb promoter are sufficient to recapitulate endogenous expression at the onset of zygotic transcription. After each mitosis, in the anterior, expression is turned on to rapidly reach a plateau with all nuclei expressing the reporter. Consistent with a Bicoid dose-dependent activation process, the time period required to reach the plateau increases with the distance to the anterior pole. Despite the challenge imposed by frequent mitoses and high nuclei-to-nuclei variability in transcription kinetics, it only takes 3 minutes at each interphase for the MS2 reporter loci to distinguish subtle differences in Bicoid concentration and establish a steadily positioned and steep (Hill coefficient ~ 7) expression boundary. Modeling based on the cooperativity between the 6 known Bicoid binding sites in the hb promoter region, assuming rate limiting concentrations of the Bicoid transcription factor at the boundary, is able to capture the observed dynamics of pattern establishment but not the steepness of the boundary. This suggests that a simple model based only on the cooperative binding of Bicoid is not sufficient to describe the spatiotemporal dynamics of early hb expression.http://europepmc.org/articles/PMC6221364?pdf=render
collection DOAJ
language English
format Article
sources DOAJ
author Tanguy Lucas
Huy Tran
Carmina Angelica Perez Romero
Aurélien Guillou
Cécile Fradin
Mathieu Coppey
Aleksandra M Walczak
Nathalie Dostatni
spellingShingle Tanguy Lucas
Huy Tran
Carmina Angelica Perez Romero
Aurélien Guillou
Cécile Fradin
Mathieu Coppey
Aleksandra M Walczak
Nathalie Dostatni
3 minutes to precisely measure morphogen concentration.
PLoS Genetics
author_facet Tanguy Lucas
Huy Tran
Carmina Angelica Perez Romero
Aurélien Guillou
Cécile Fradin
Mathieu Coppey
Aleksandra M Walczak
Nathalie Dostatni
author_sort Tanguy Lucas
title 3 minutes to precisely measure morphogen concentration.
title_short 3 minutes to precisely measure morphogen concentration.
title_full 3 minutes to precisely measure morphogen concentration.
title_fullStr 3 minutes to precisely measure morphogen concentration.
title_full_unstemmed 3 minutes to precisely measure morphogen concentration.
title_sort 3 minutes to precisely measure morphogen concentration.
publisher Public Library of Science (PLoS)
series PLoS Genetics
issn 1553-7390
1553-7404
publishDate 2018-10-01
description Morphogen gradients provide concentration-dependent positional information along polarity axes. Although the dynamics of the establishment of these gradients is well described, precision and noise in the downstream activation processes remain elusive. A simple paradigm to address these questions is the Bicoid morphogen gradient that elicits a rapid step-like transcriptional response in young fruit fly embryos. Focusing on the expression of the major Bicoid target, hunchback (hb), at the onset of zygotic transcription, we used the MS2-MCP approach which combines fluorescent labeling of nascent mRNA with live imaging at high spatial and temporal resolution. Removing 36 putative Zelda binding sites unexpectedly present in the original MS2 reporter, we show that the 750 bp of the hb promoter are sufficient to recapitulate endogenous expression at the onset of zygotic transcription. After each mitosis, in the anterior, expression is turned on to rapidly reach a plateau with all nuclei expressing the reporter. Consistent with a Bicoid dose-dependent activation process, the time period required to reach the plateau increases with the distance to the anterior pole. Despite the challenge imposed by frequent mitoses and high nuclei-to-nuclei variability in transcription kinetics, it only takes 3 minutes at each interphase for the MS2 reporter loci to distinguish subtle differences in Bicoid concentration and establish a steadily positioned and steep (Hill coefficient ~ 7) expression boundary. Modeling based on the cooperativity between the 6 known Bicoid binding sites in the hb promoter region, assuming rate limiting concentrations of the Bicoid transcription factor at the boundary, is able to capture the observed dynamics of pattern establishment but not the steepness of the boundary. This suggests that a simple model based only on the cooperative binding of Bicoid is not sufficient to describe the spatiotemporal dynamics of early hb expression.
url http://europepmc.org/articles/PMC6221364?pdf=render
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