Proline Residues as Switches in Conformational Changes Leading to Amyloid Fibril Formation

Here we discuss studies of the structure, folding, oligomerization and amyloid fibril formation of several proline mutants of human stefin B, which is a protein inhibitor of lysosomal cysteine cathepsins and a member of the cystatin family. The structurally important prolines in stefin B are respons...

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Main Authors: Ajda Taler-Verčič, Samra Hasanbašić, Selma Berbić, Veronika Stoka, Dušan Turk, Eva Žerovnik
Format: Article
Language:English
Published: MDPI AG 2017-03-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:http://www.mdpi.com/1422-0067/18/3/549
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spelling doaj-26d0ea4ff4084218b21b94dd63d893292020-11-24T22:06:42ZengMDPI AGInternational Journal of Molecular Sciences1422-00672017-03-0118354910.3390/ijms18030549ijms18030549Proline Residues as Switches in Conformational Changes Leading to Amyloid Fibril FormationAjda Taler-Verčič0Samra Hasanbašić1Selma Berbić2Veronika Stoka3Dušan Turk4Eva Žerovnik5Department of Biochemistry and Molecular and Structural Biology, Jožef Stefan Institute, Jamova 39, 1000 Ljubljana, SloveniaJožef Stefan International Postgraduate School, Jamova 39, 1000 Ljubljana, SloveniaFaculty of Pharmacy, Department of Biochemistry, University of Tuzla, Univerzitetska 1, 75000 Tuzla, Bosnia and HerzegovinaDepartment of Biochemistry and Molecular and Structural Biology, Jožef Stefan Institute, Jamova 39, 1000 Ljubljana, SloveniaDepartment of Biochemistry and Molecular and Structural Biology, Jožef Stefan Institute, Jamova 39, 1000 Ljubljana, SloveniaDepartment of Biochemistry and Molecular and Structural Biology, Jožef Stefan Institute, Jamova 39, 1000 Ljubljana, SloveniaHere we discuss studies of the structure, folding, oligomerization and amyloid fibril formation of several proline mutants of human stefin B, which is a protein inhibitor of lysosomal cysteine cathepsins and a member of the cystatin family. The structurally important prolines in stefin B are responsible for the slow folding phases and facilitate domain swapping (Pro 74) and loop swapping (Pro 79). Moreover, our findings are compared to β2-microglobulin, a protein involved in dialysis-related amyloidosis. The assessment of the contribution of proline residues to the process of amyloid fibril formation may shed new light on the critical molecular events involved in conformational disorders.http://www.mdpi.com/1422-0067/18/3/549cis prolineconformational switchfolding intermediatedomain swappingamyloid fibrilsprotein aggregationstefin Bβ2-microglobulin
collection DOAJ
language English
format Article
sources DOAJ
author Ajda Taler-Verčič
Samra Hasanbašić
Selma Berbić
Veronika Stoka
Dušan Turk
Eva Žerovnik
spellingShingle Ajda Taler-Verčič
Samra Hasanbašić
Selma Berbić
Veronika Stoka
Dušan Turk
Eva Žerovnik
Proline Residues as Switches in Conformational Changes Leading to Amyloid Fibril Formation
International Journal of Molecular Sciences
cis proline
conformational switch
folding intermediate
domain swapping
amyloid fibrils
protein aggregation
stefin B
β2-microglobulin
author_facet Ajda Taler-Verčič
Samra Hasanbašić
Selma Berbić
Veronika Stoka
Dušan Turk
Eva Žerovnik
author_sort Ajda Taler-Verčič
title Proline Residues as Switches in Conformational Changes Leading to Amyloid Fibril Formation
title_short Proline Residues as Switches in Conformational Changes Leading to Amyloid Fibril Formation
title_full Proline Residues as Switches in Conformational Changes Leading to Amyloid Fibril Formation
title_fullStr Proline Residues as Switches in Conformational Changes Leading to Amyloid Fibril Formation
title_full_unstemmed Proline Residues as Switches in Conformational Changes Leading to Amyloid Fibril Formation
title_sort proline residues as switches in conformational changes leading to amyloid fibril formation
publisher MDPI AG
series International Journal of Molecular Sciences
issn 1422-0067
publishDate 2017-03-01
description Here we discuss studies of the structure, folding, oligomerization and amyloid fibril formation of several proline mutants of human stefin B, which is a protein inhibitor of lysosomal cysteine cathepsins and a member of the cystatin family. The structurally important prolines in stefin B are responsible for the slow folding phases and facilitate domain swapping (Pro 74) and loop swapping (Pro 79). Moreover, our findings are compared to β2-microglobulin, a protein involved in dialysis-related amyloidosis. The assessment of the contribution of proline residues to the process of amyloid fibril formation may shed new light on the critical molecular events involved in conformational disorders.
topic cis proline
conformational switch
folding intermediate
domain swapping
amyloid fibrils
protein aggregation
stefin B
β2-microglobulin
url http://www.mdpi.com/1422-0067/18/3/549
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