Biosensors-Based In Vivo Quantification of 2-Oxoglutarate in Cyanobacteria and Proteobacteria
2-oxoglutarate (α-ketoglutarate; 2-OG) is an intermediate of the Krebs cycle, and constitutes the carbon skeleton for nitrogen assimilation and the synthesis of a variety of compounds. In addition to being an important metabolite, 2-OG is a signaling molecule with a broad regulatory reperto...
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2018-10-01
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doaj-269a5176a35444fcb4a9cfc11cb4bf812020-11-25T00:38:57ZengMDPI AGLife2075-17292018-10-01845110.3390/life8040051life8040051Biosensors-Based In Vivo Quantification of 2-Oxoglutarate in Cyanobacteria and ProteobacteriaHai-Lin Chen0Amel Latifi1Cheng-Cai Zhang2Christophe Sébastien Bernard3Aix Marseille Univ, CNRS, LCB, IMM, 13009 Marseille, FranceAix Marseille Univ, CNRS, LCB, IMM, 13009 Marseille, FranceAix Marseille Univ, CNRS, LCB, IMM, 13009 Marseille, FranceAix Marseille Univ, CNRS, LCB, IMM, 13009 Marseille, France2-oxoglutarate (α-ketoglutarate; 2-OG) is an intermediate of the Krebs cycle, and constitutes the carbon skeleton for nitrogen assimilation and the synthesis of a variety of compounds. In addition to being an important metabolite, 2-OG is a signaling molecule with a broad regulatory repertoire in a variety of organisms, including plants, animals, and bacteria. Although challenging, measuring the levels and variations of metabolic signals in vivo is critical to better understand how cells control specific processes. To measure cellular 2-OG concentrations and dynamics, we designed a set of biosensors based on the fluorescence resonance energy transfer (FRET) technology that can be used in vivo in different organisms. For this purpose, we took advantage of the conformational changes of two cyanobacterial proteins induced by 2-OG binding. We show that these biosensors responded immediately and specifically to different 2-OG levels, and hence allowed to measure 2-OG variations in function of environmental modifications in the proteobacterium <i>Escherichia coli</i> and in the cyanobacterium <i>Anabaena</i> sp. PCC 7120. Our results pave the way to study 2-OG dynamics at the cellular level in uni- and multi-cellular organisms.https://www.mdpi.com/2075-1729/8/4/51biosensorcyanobacteria<i>Escherichia coli</i>FRET2-oxoglutarate |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Hai-Lin Chen Amel Latifi Cheng-Cai Zhang Christophe Sébastien Bernard |
spellingShingle |
Hai-Lin Chen Amel Latifi Cheng-Cai Zhang Christophe Sébastien Bernard Biosensors-Based In Vivo Quantification of 2-Oxoglutarate in Cyanobacteria and Proteobacteria Life biosensor cyanobacteria <i>Escherichia coli</i> FRET 2-oxoglutarate |
author_facet |
Hai-Lin Chen Amel Latifi Cheng-Cai Zhang Christophe Sébastien Bernard |
author_sort |
Hai-Lin Chen |
title |
Biosensors-Based In Vivo Quantification of 2-Oxoglutarate in Cyanobacteria and Proteobacteria |
title_short |
Biosensors-Based In Vivo Quantification of 2-Oxoglutarate in Cyanobacteria and Proteobacteria |
title_full |
Biosensors-Based In Vivo Quantification of 2-Oxoglutarate in Cyanobacteria and Proteobacteria |
title_fullStr |
Biosensors-Based In Vivo Quantification of 2-Oxoglutarate in Cyanobacteria and Proteobacteria |
title_full_unstemmed |
Biosensors-Based In Vivo Quantification of 2-Oxoglutarate in Cyanobacteria and Proteobacteria |
title_sort |
biosensors-based in vivo quantification of 2-oxoglutarate in cyanobacteria and proteobacteria |
publisher |
MDPI AG |
series |
Life |
issn |
2075-1729 |
publishDate |
2018-10-01 |
description |
2-oxoglutarate (α-ketoglutarate; 2-OG) is an intermediate of the Krebs cycle, and constitutes the carbon skeleton for nitrogen assimilation and the synthesis of a variety of compounds. In addition to being an important metabolite, 2-OG is a signaling molecule with a broad regulatory repertoire in a variety of organisms, including plants, animals, and bacteria. Although challenging, measuring the levels and variations of metabolic signals in vivo is critical to better understand how cells control specific processes. To measure cellular 2-OG concentrations and dynamics, we designed a set of biosensors based on the fluorescence resonance energy transfer (FRET) technology that can be used in vivo in different organisms. For this purpose, we took advantage of the conformational changes of two cyanobacterial proteins induced by 2-OG binding. We show that these biosensors responded immediately and specifically to different 2-OG levels, and hence allowed to measure 2-OG variations in function of environmental modifications in the proteobacterium <i>Escherichia coli</i> and in the cyanobacterium <i>Anabaena</i> sp. PCC 7120. Our results pave the way to study 2-OG dynamics at the cellular level in uni- and multi-cellular organisms. |
topic |
biosensor cyanobacteria <i>Escherichia coli</i> FRET 2-oxoglutarate |
url |
https://www.mdpi.com/2075-1729/8/4/51 |
work_keys_str_mv |
AT hailinchen biosensorsbasedinvivoquantificationof2oxoglutarateincyanobacteriaandproteobacteria AT amellatifi biosensorsbasedinvivoquantificationof2oxoglutarateincyanobacteriaandproteobacteria AT chengcaizhang biosensorsbasedinvivoquantificationof2oxoglutarateincyanobacteriaandproteobacteria AT christophesebastienbernard biosensorsbasedinvivoquantificationof2oxoglutarateincyanobacteriaandproteobacteria |
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