Identification of Putative Aquaporin Genes and Their Expression Analysis under Hypoxic Conditions in Soybean [Glycine max (L.) Merr.]

The aims of this study were to detect plasma-membrane intrinsic protein type 2 (PIP2) genes of soybean (cv. Enrei) and to analyze mRNA levels of these genes under normoxic (control) and hypoxic conditions. A sequence similarity search with cDNA sequences in soybean genome revealed three putative aqu...

Full description

Bibliographic Details
Main Authors: Naoki Matsuo, Yohei Nanjo, Makoto Tougou, Takuji Nakamura, Keito Nishizawa, Setsuko Komatsu, Satoshi Shimamura
Format: Article
Language:English
Published: Taylor & Francis Group 2012-01-01
Series:Plant Production Science
Subjects:
Online Access:http://dx.doi.org/10.1626/pps.15.278
id doaj-262879a37141431c83d1964da155f4f8
record_format Article
spelling doaj-262879a37141431c83d1964da155f4f82020-11-24T21:56:56ZengTaylor & Francis GroupPlant Production Science1343-943X1349-10082012-01-0115427828310.1626/pps.15.27811645125Identification of Putative Aquaporin Genes and Their Expression Analysis under Hypoxic Conditions in Soybean [Glycine max (L.) Merr.]Naoki Matsuo0Yohei Nanjo1Makoto Tougou2Takuji Nakamura3Keito Nishizawa4Setsuko Komatsu5Satoshi Shimamura6Kyushu Okinawa Agricultural Research CenterNational Institute of Crop Science,National Institute of Crop Science,Hokkaido Agricultural Research CenterNational Institute of Crop Science,National Institute of Crop Science,Tohoku Agricultural Research CenterThe aims of this study were to detect plasma-membrane intrinsic protein type 2 (PIP2) genes of soybean (cv. Enrei) and to analyze mRNA levels of these genes under normoxic (control) and hypoxic conditions. A sequence similarity search with cDNA sequences in soybean genome revealed three putative aquaporin genes with high homology to GmPIP2;2. The genes were designated GmPIP2 genes. The mRNA levels in roots of soybean seedlings were measured at 3, 6, 12, and 27 hr after hypoxic stress onset. The mRNA levels of all GmPIP2s showed clear diurnal changes in the control, meanwhile, those under hypoxic conditions were significantly down-regulated even at 3 hr after stress onset. These results suggest that the four GmPIP2 genes are transcriptionally co-regulated by the diurnal change and oxygen concentration in the surrounding environment, and the transcriptional regulation may be involved in adjustment of water-transport in roots of soybean seedlings.http://dx.doi.org/10.1626/pps.15.278AquaporinGene expressionPlasma membrane intrinsic proteinRoot hypoxiaSoybean
collection DOAJ
language English
format Article
sources DOAJ
author Naoki Matsuo
Yohei Nanjo
Makoto Tougou
Takuji Nakamura
Keito Nishizawa
Setsuko Komatsu
Satoshi Shimamura
spellingShingle Naoki Matsuo
Yohei Nanjo
Makoto Tougou
Takuji Nakamura
Keito Nishizawa
Setsuko Komatsu
Satoshi Shimamura
Identification of Putative Aquaporin Genes and Their Expression Analysis under Hypoxic Conditions in Soybean [Glycine max (L.) Merr.]
Plant Production Science
Aquaporin
Gene expression
Plasma membrane intrinsic protein
Root hypoxia
Soybean
author_facet Naoki Matsuo
Yohei Nanjo
Makoto Tougou
Takuji Nakamura
Keito Nishizawa
Setsuko Komatsu
Satoshi Shimamura
author_sort Naoki Matsuo
title Identification of Putative Aquaporin Genes and Their Expression Analysis under Hypoxic Conditions in Soybean [Glycine max (L.) Merr.]
title_short Identification of Putative Aquaporin Genes and Their Expression Analysis under Hypoxic Conditions in Soybean [Glycine max (L.) Merr.]
title_full Identification of Putative Aquaporin Genes and Their Expression Analysis under Hypoxic Conditions in Soybean [Glycine max (L.) Merr.]
title_fullStr Identification of Putative Aquaporin Genes and Their Expression Analysis under Hypoxic Conditions in Soybean [Glycine max (L.) Merr.]
title_full_unstemmed Identification of Putative Aquaporin Genes and Their Expression Analysis under Hypoxic Conditions in Soybean [Glycine max (L.) Merr.]
title_sort identification of putative aquaporin genes and their expression analysis under hypoxic conditions in soybean [glycine max (l.) merr.]
publisher Taylor & Francis Group
series Plant Production Science
issn 1343-943X
1349-1008
publishDate 2012-01-01
description The aims of this study were to detect plasma-membrane intrinsic protein type 2 (PIP2) genes of soybean (cv. Enrei) and to analyze mRNA levels of these genes under normoxic (control) and hypoxic conditions. A sequence similarity search with cDNA sequences in soybean genome revealed three putative aquaporin genes with high homology to GmPIP2;2. The genes were designated GmPIP2 genes. The mRNA levels in roots of soybean seedlings were measured at 3, 6, 12, and 27 hr after hypoxic stress onset. The mRNA levels of all GmPIP2s showed clear diurnal changes in the control, meanwhile, those under hypoxic conditions were significantly down-regulated even at 3 hr after stress onset. These results suggest that the four GmPIP2 genes are transcriptionally co-regulated by the diurnal change and oxygen concentration in the surrounding environment, and the transcriptional regulation may be involved in adjustment of water-transport in roots of soybean seedlings.
topic Aquaporin
Gene expression
Plasma membrane intrinsic protein
Root hypoxia
Soybean
url http://dx.doi.org/10.1626/pps.15.278
work_keys_str_mv AT naokimatsuo identificationofputativeaquaporingenesandtheirexpressionanalysisunderhypoxicconditionsinsoybeanglycinemaxlmerr
AT yoheinanjo identificationofputativeaquaporingenesandtheirexpressionanalysisunderhypoxicconditionsinsoybeanglycinemaxlmerr
AT makototougou identificationofputativeaquaporingenesandtheirexpressionanalysisunderhypoxicconditionsinsoybeanglycinemaxlmerr
AT takujinakamura identificationofputativeaquaporingenesandtheirexpressionanalysisunderhypoxicconditionsinsoybeanglycinemaxlmerr
AT keitonishizawa identificationofputativeaquaporingenesandtheirexpressionanalysisunderhypoxicconditionsinsoybeanglycinemaxlmerr
AT setsukokomatsu identificationofputativeaquaporingenesandtheirexpressionanalysisunderhypoxicconditionsinsoybeanglycinemaxlmerr
AT satoshishimamura identificationofputativeaquaporingenesandtheirexpressionanalysisunderhypoxicconditionsinsoybeanglycinemaxlmerr
_version_ 1725856348762013696