Identification of Putative Aquaporin Genes and Their Expression Analysis under Hypoxic Conditions in Soybean [Glycine max (L.) Merr.]
The aims of this study were to detect plasma-membrane intrinsic protein type 2 (PIP2) genes of soybean (cv. Enrei) and to analyze mRNA levels of these genes under normoxic (control) and hypoxic conditions. A sequence similarity search with cDNA sequences in soybean genome revealed three putative aqu...
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2012-01-01
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Online Access: | http://dx.doi.org/10.1626/pps.15.278 |
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doaj-262879a37141431c83d1964da155f4f82020-11-24T21:56:56ZengTaylor & Francis GroupPlant Production Science1343-943X1349-10082012-01-0115427828310.1626/pps.15.27811645125Identification of Putative Aquaporin Genes and Their Expression Analysis under Hypoxic Conditions in Soybean [Glycine max (L.) Merr.]Naoki Matsuo0Yohei Nanjo1Makoto Tougou2Takuji Nakamura3Keito Nishizawa4Setsuko Komatsu5Satoshi Shimamura6Kyushu Okinawa Agricultural Research CenterNational Institute of Crop Science,National Institute of Crop Science,Hokkaido Agricultural Research CenterNational Institute of Crop Science,National Institute of Crop Science,Tohoku Agricultural Research CenterThe aims of this study were to detect plasma-membrane intrinsic protein type 2 (PIP2) genes of soybean (cv. Enrei) and to analyze mRNA levels of these genes under normoxic (control) and hypoxic conditions. A sequence similarity search with cDNA sequences in soybean genome revealed three putative aquaporin genes with high homology to GmPIP2;2. The genes were designated GmPIP2 genes. The mRNA levels in roots of soybean seedlings were measured at 3, 6, 12, and 27 hr after hypoxic stress onset. The mRNA levels of all GmPIP2s showed clear diurnal changes in the control, meanwhile, those under hypoxic conditions were significantly down-regulated even at 3 hr after stress onset. These results suggest that the four GmPIP2 genes are transcriptionally co-regulated by the diurnal change and oxygen concentration in the surrounding environment, and the transcriptional regulation may be involved in adjustment of water-transport in roots of soybean seedlings.http://dx.doi.org/10.1626/pps.15.278AquaporinGene expressionPlasma membrane intrinsic proteinRoot hypoxiaSoybean |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Naoki Matsuo Yohei Nanjo Makoto Tougou Takuji Nakamura Keito Nishizawa Setsuko Komatsu Satoshi Shimamura |
spellingShingle |
Naoki Matsuo Yohei Nanjo Makoto Tougou Takuji Nakamura Keito Nishizawa Setsuko Komatsu Satoshi Shimamura Identification of Putative Aquaporin Genes and Their Expression Analysis under Hypoxic Conditions in Soybean [Glycine max (L.) Merr.] Plant Production Science Aquaporin Gene expression Plasma membrane intrinsic protein Root hypoxia Soybean |
author_facet |
Naoki Matsuo Yohei Nanjo Makoto Tougou Takuji Nakamura Keito Nishizawa Setsuko Komatsu Satoshi Shimamura |
author_sort |
Naoki Matsuo |
title |
Identification of Putative Aquaporin Genes and Their Expression Analysis under Hypoxic Conditions in Soybean [Glycine max (L.) Merr.] |
title_short |
Identification of Putative Aquaporin Genes and Their Expression Analysis under Hypoxic Conditions in Soybean [Glycine max (L.) Merr.] |
title_full |
Identification of Putative Aquaporin Genes and Their Expression Analysis under Hypoxic Conditions in Soybean [Glycine max (L.) Merr.] |
title_fullStr |
Identification of Putative Aquaporin Genes and Their Expression Analysis under Hypoxic Conditions in Soybean [Glycine max (L.) Merr.] |
title_full_unstemmed |
Identification of Putative Aquaporin Genes and Their Expression Analysis under Hypoxic Conditions in Soybean [Glycine max (L.) Merr.] |
title_sort |
identification of putative aquaporin genes and their expression analysis under hypoxic conditions in soybean [glycine max (l.) merr.] |
publisher |
Taylor & Francis Group |
series |
Plant Production Science |
issn |
1343-943X 1349-1008 |
publishDate |
2012-01-01 |
description |
The aims of this study were to detect plasma-membrane intrinsic protein type 2 (PIP2) genes of soybean (cv. Enrei) and to analyze mRNA levels of these genes under normoxic (control) and hypoxic conditions. A sequence similarity search with cDNA sequences in soybean genome revealed three putative aquaporin genes with high homology to GmPIP2;2. The genes were designated GmPIP2 genes. The mRNA levels in roots of soybean seedlings were measured at 3, 6, 12, and 27 hr after hypoxic stress onset. The mRNA levels of all GmPIP2s showed clear diurnal changes in the control, meanwhile, those under hypoxic conditions were significantly down-regulated even at 3 hr after stress onset. These results suggest that the four GmPIP2 genes are transcriptionally co-regulated by the diurnal change and oxygen concentration in the surrounding environment, and the transcriptional regulation may be involved in adjustment of water-transport in roots of soybean seedlings. |
topic |
Aquaporin Gene expression Plasma membrane intrinsic protein Root hypoxia Soybean |
url |
http://dx.doi.org/10.1626/pps.15.278 |
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