Association study between (rs1799750) polymorphism and periodontal by Tetra arms-PCR

Background and Aims: Periodontitis is one of the most common causes of damage to the gums and retaining structures of the teeth. Matrix protein, a metalloproteinase, is known as intermediate collagenase and the enzyme collagenase fibroblast, which is encoded in humans by the MMP-1 gene. The aim of t...

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Main Authors: Mohadese Baghdadchi, Elham Siasi Torbati, Kumars Amini
Format: Article
Language:fas
Published: Tehran University of Medical Sciences 2020-08-01
Series:Journal of Dental Medicine
Subjects:
Online Access:http://jdm.tums.ac.ir/article-1-5980-en.html
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spelling doaj-2544da6328c24500ae261b9c3cedaa552020-11-25T04:09:39ZfasTehran University of Medical SciencesJournal of Dental Medicine1024-641X2008-24442020-08-013311725Association study between (rs1799750) polymorphism and periodontal by Tetra arms-PCRMohadese Baghdadchi0Elham Siasi Torbati1Kumars Amini2 Master of Genetics, Department of Genetic, Faculty of Sciences, North Tehran Branch, Islamic Azad University, Tehran, Iran Assistant Professor, Department of Genetic, Faculty of Sciences, North Tehran Branch, Islamic Azad University, Tehran, Iran Associate Professor, Department of Microbiology, Faculty of Sciences, Saveh Branch, Islamic Azad University, Saveh, Iran Background and Aims: Periodontitis is one of the most common causes of damage to the gums and retaining structures of the teeth. Matrix protein, a metalloproteinase, is known as intermediate collagenase and the enzyme collagenase fibroblast, which is encoded in humans by the MMP-1 gene. The aim of this study was to investigate 1G/2G polymorphism in the MMP-1 gene and its association with the periodontal disease in the Iranian patients. Materials and Methods: In this study, 50 patients with periodontal disease and 50 patients were selected as the control group in Kerman city. DNA was extracted from a personchr('39')s blood sample using a kit. The desired primers were controlled by the NCBI site. Then, with the Tetra arms PCR technique, the desired polymorphism was multiplied. In the next step, the samples were transferred to electrophoresis gel and examined. The results were analyzed with SPSS software using T-test or Squer Chi-(X2). Results: The percentage of 1G/1G genotype in the patients group was 8% and for the controls group was 0%. The percentage of 2G/2G genotype for the patients group was 24% and for the controls group was 18%. In addition, the 1G/2G genotype frequency was 68% for the patients group, and for the controls group was 82% (P=0.83). The results of Tetra-arms PCR genotyping of the samples were confirmed by sequencing. Conclusion: The findings indicated that in Iranian patients, MMP-1 -1607 1G/2G (rs1799750) was not significantly associated with periodontal disease. It is recommended to take more samples from different parts of Iran to confirm the results.http://jdm.tums.ac.ir/article-1-5980-en.htmlperiodontitisgenesequencingsingle nucleotide polymorphism
collection DOAJ
language fas
format Article
sources DOAJ
author Mohadese Baghdadchi
Elham Siasi Torbati
Kumars Amini
spellingShingle Mohadese Baghdadchi
Elham Siasi Torbati
Kumars Amini
Association study between (rs1799750) polymorphism and periodontal by Tetra arms-PCR
Journal of Dental Medicine
periodontitis
gene
sequencing
single nucleotide polymorphism
author_facet Mohadese Baghdadchi
Elham Siasi Torbati
Kumars Amini
author_sort Mohadese Baghdadchi
title Association study between (rs1799750) polymorphism and periodontal by Tetra arms-PCR
title_short Association study between (rs1799750) polymorphism and periodontal by Tetra arms-PCR
title_full Association study between (rs1799750) polymorphism and periodontal by Tetra arms-PCR
title_fullStr Association study between (rs1799750) polymorphism and periodontal by Tetra arms-PCR
title_full_unstemmed Association study between (rs1799750) polymorphism and periodontal by Tetra arms-PCR
title_sort association study between (rs1799750) polymorphism and periodontal by tetra arms-pcr
publisher Tehran University of Medical Sciences
series Journal of Dental Medicine
issn 1024-641X
2008-2444
publishDate 2020-08-01
description Background and Aims: Periodontitis is one of the most common causes of damage to the gums and retaining structures of the teeth. Matrix protein, a metalloproteinase, is known as intermediate collagenase and the enzyme collagenase fibroblast, which is encoded in humans by the MMP-1 gene. The aim of this study was to investigate 1G/2G polymorphism in the MMP-1 gene and its association with the periodontal disease in the Iranian patients. Materials and Methods: In this study, 50 patients with periodontal disease and 50 patients were selected as the control group in Kerman city. DNA was extracted from a personchr('39')s blood sample using a kit. The desired primers were controlled by the NCBI site. Then, with the Tetra arms PCR technique, the desired polymorphism was multiplied. In the next step, the samples were transferred to electrophoresis gel and examined. The results were analyzed with SPSS software using T-test or Squer Chi-(X2). Results: The percentage of 1G/1G genotype in the patients group was 8% and for the controls group was 0%. The percentage of 2G/2G genotype for the patients group was 24% and for the controls group was 18%. In addition, the 1G/2G genotype frequency was 68% for the patients group, and for the controls group was 82% (P=0.83). The results of Tetra-arms PCR genotyping of the samples were confirmed by sequencing. Conclusion: The findings indicated that in Iranian patients, MMP-1 -1607 1G/2G (rs1799750) was not significantly associated with periodontal disease. It is recommended to take more samples from different parts of Iran to confirm the results.
topic periodontitis
gene
sequencing
single nucleotide polymorphism
url http://jdm.tums.ac.ir/article-1-5980-en.html
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