Data for transcriptomic and proteomic analyses of leaves from Clematis terniflora DC. under binary stress
High level of UV-B irradiation followed by dark treatment accumulates secondary metabolites in Clematis terniflora DC. To investigate the response mechanism under high level of UV-B irradiation followed by dark treatment, transcriptomic and proteomic analyses were performed in leaves of Clematis ter...
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doaj-25277753ed94482f9a0ba59a23a67ca52020-11-25T02:05:17ZengElsevierData in Brief2352-34092017-06-0112C13814210.1016/j.dib.2017.03.021Data for transcriptomic and proteomic analyses of leaves from Clematis terniflora DC. under binary stressBingxian Yang0Qijie Guan1Jingkui Tian2Setsuko Komatsu3College of Biomedical Engineering & Instrument Science, Zhejiang University, Hangzhou 310027, ChinaCollege of Biomedical Engineering & Instrument Science, Zhejiang University, Hangzhou 310027, ChinaCollege of Biomedical Engineering & Instrument Science, Zhejiang University, Hangzhou 310027, ChinaNational Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, JapanHigh level of UV-B irradiation followed by dark treatment accumulates secondary metabolites in Clematis terniflora DC. To investigate the response mechanism under high level of UV-B irradiation followed by dark treatment, transcriptomic and proteomic analyses were performed in leaves of Clematis terniflora DC. The experimental design for the transcriptomic and proteomic analyses in leaves of C. terniflora under stresses was organized into a picture. For transcriptomics, mRNA-sequencing technology was used. Genes identified in leaves of C. terniflora at starting point, high level of UV-B irradiation, and high level of UV-B irradiation followed by dark treatment were listed; genes with different expression levels at starting point, high level of UV-B irradiation, and high level of UV-B irradiation followed by dark treatment were also presented in this DiB article. For proteomics, a gel-free/label-free proteomic technique was used. Proteins with different abundances in leaves at starting point, high level of UV-B irradiation, and high level of UV-B irradiation followed by dark treatment were presented in this DiB article. In order to monitor the expression levels of genes under the stress, quantitative reverse transcription polymerase chain reaction was performed. The primer sequences of genes selected for quantitative reverse transcription polymerase chain reaction was presented in this DiB article.http://www.sciencedirect.com/science/article/pii/S2352340917300975TranscriptomicsProteomicsClematis terniflora DC |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Bingxian Yang Qijie Guan Jingkui Tian Setsuko Komatsu |
spellingShingle |
Bingxian Yang Qijie Guan Jingkui Tian Setsuko Komatsu Data for transcriptomic and proteomic analyses of leaves from Clematis terniflora DC. under binary stress Data in Brief Transcriptomics Proteomics Clematis terniflora DC |
author_facet |
Bingxian Yang Qijie Guan Jingkui Tian Setsuko Komatsu |
author_sort |
Bingxian Yang |
title |
Data for transcriptomic and proteomic analyses of leaves from Clematis terniflora DC. under binary stress |
title_short |
Data for transcriptomic and proteomic analyses of leaves from Clematis terniflora DC. under binary stress |
title_full |
Data for transcriptomic and proteomic analyses of leaves from Clematis terniflora DC. under binary stress |
title_fullStr |
Data for transcriptomic and proteomic analyses of leaves from Clematis terniflora DC. under binary stress |
title_full_unstemmed |
Data for transcriptomic and proteomic analyses of leaves from Clematis terniflora DC. under binary stress |
title_sort |
data for transcriptomic and proteomic analyses of leaves from clematis terniflora dc. under binary stress |
publisher |
Elsevier |
series |
Data in Brief |
issn |
2352-3409 |
publishDate |
2017-06-01 |
description |
High level of UV-B irradiation followed by dark treatment accumulates secondary metabolites in Clematis terniflora DC. To investigate the response mechanism under high level of UV-B irradiation followed by dark treatment, transcriptomic and proteomic analyses were performed in leaves of Clematis terniflora DC. The experimental design for the transcriptomic and proteomic analyses in leaves of C. terniflora under stresses was organized into a picture. For transcriptomics, mRNA-sequencing technology was used. Genes identified in leaves of C. terniflora at starting point, high level of UV-B irradiation, and high level of UV-B irradiation followed by dark treatment were listed; genes with different expression levels at starting point, high level of UV-B irradiation, and high level of UV-B irradiation followed by dark treatment were also presented in this DiB article. For proteomics, a gel-free/label-free proteomic technique was used. Proteins with different abundances in leaves at starting point, high level of UV-B irradiation, and high level of UV-B irradiation followed by dark treatment were presented in this DiB article. In order to monitor the expression levels of genes under the stress, quantitative reverse transcription polymerase chain reaction was performed. The primer sequences of genes selected for quantitative reverse transcription polymerase chain reaction was presented in this DiB article. |
topic |
Transcriptomics Proteomics Clematis terniflora DC |
url |
http://www.sciencedirect.com/science/article/pii/S2352340917300975 |
work_keys_str_mv |
AT bingxianyang datafortranscriptomicandproteomicanalysesofleavesfromclematisternifloradcunderbinarystress AT qijieguan datafortranscriptomicandproteomicanalysesofleavesfromclematisternifloradcunderbinarystress AT jingkuitian datafortranscriptomicandproteomicanalysesofleavesfromclematisternifloradcunderbinarystress AT setsukokomatsu datafortranscriptomicandproteomicanalysesofleavesfromclematisternifloradcunderbinarystress |
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