Data for transcriptomic and proteomic analyses of leaves from Clematis terniflora DC. under binary stress

High level of UV-B irradiation followed by dark treatment accumulates secondary metabolites in Clematis terniflora DC. To investigate the response mechanism under high level of UV-B irradiation followed by dark treatment, transcriptomic and proteomic analyses were performed in leaves of Clematis ter...

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Main Authors: Bingxian Yang, Qijie Guan, Jingkui Tian, Setsuko Komatsu
Format: Article
Language:English
Published: Elsevier 2017-06-01
Series:Data in Brief
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2352340917300975
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spelling doaj-25277753ed94482f9a0ba59a23a67ca52020-11-25T02:05:17ZengElsevierData in Brief2352-34092017-06-0112C13814210.1016/j.dib.2017.03.021Data for transcriptomic and proteomic analyses of leaves from Clematis terniflora DC. under binary stressBingxian Yang0Qijie Guan1Jingkui Tian2Setsuko Komatsu3College of Biomedical Engineering & Instrument Science, Zhejiang University, Hangzhou 310027, ChinaCollege of Biomedical Engineering & Instrument Science, Zhejiang University, Hangzhou 310027, ChinaCollege of Biomedical Engineering & Instrument Science, Zhejiang University, Hangzhou 310027, ChinaNational Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, JapanHigh level of UV-B irradiation followed by dark treatment accumulates secondary metabolites in Clematis terniflora DC. To investigate the response mechanism under high level of UV-B irradiation followed by dark treatment, transcriptomic and proteomic analyses were performed in leaves of Clematis terniflora DC. The experimental design for the transcriptomic and proteomic analyses in leaves of C. terniflora under stresses was organized into a picture. For transcriptomics, mRNA-sequencing technology was used. Genes identified in leaves of C. terniflora at starting point, high level of UV-B irradiation, and high level of UV-B irradiation followed by dark treatment were listed; genes with different expression levels at starting point, high level of UV-B irradiation, and high level of UV-B irradiation followed by dark treatment were also presented in this DiB article. For proteomics, a gel-free/label-free proteomic technique was used. Proteins with different abundances in leaves at starting point, high level of UV-B irradiation, and high level of UV-B irradiation followed by dark treatment were presented in this DiB article. In order to monitor the expression levels of genes under the stress, quantitative reverse transcription polymerase chain reaction was performed. The primer sequences of genes selected for quantitative reverse transcription polymerase chain reaction was presented in this DiB article.http://www.sciencedirect.com/science/article/pii/S2352340917300975TranscriptomicsProteomicsClematis terniflora DC
collection DOAJ
language English
format Article
sources DOAJ
author Bingxian Yang
Qijie Guan
Jingkui Tian
Setsuko Komatsu
spellingShingle Bingxian Yang
Qijie Guan
Jingkui Tian
Setsuko Komatsu
Data for transcriptomic and proteomic analyses of leaves from Clematis terniflora DC. under binary stress
Data in Brief
Transcriptomics
Proteomics
Clematis terniflora DC
author_facet Bingxian Yang
Qijie Guan
Jingkui Tian
Setsuko Komatsu
author_sort Bingxian Yang
title Data for transcriptomic and proteomic analyses of leaves from Clematis terniflora DC. under binary stress
title_short Data for transcriptomic and proteomic analyses of leaves from Clematis terniflora DC. under binary stress
title_full Data for transcriptomic and proteomic analyses of leaves from Clematis terniflora DC. under binary stress
title_fullStr Data for transcriptomic and proteomic analyses of leaves from Clematis terniflora DC. under binary stress
title_full_unstemmed Data for transcriptomic and proteomic analyses of leaves from Clematis terniflora DC. under binary stress
title_sort data for transcriptomic and proteomic analyses of leaves from clematis terniflora dc. under binary stress
publisher Elsevier
series Data in Brief
issn 2352-3409
publishDate 2017-06-01
description High level of UV-B irradiation followed by dark treatment accumulates secondary metabolites in Clematis terniflora DC. To investigate the response mechanism under high level of UV-B irradiation followed by dark treatment, transcriptomic and proteomic analyses were performed in leaves of Clematis terniflora DC. The experimental design for the transcriptomic and proteomic analyses in leaves of C. terniflora under stresses was organized into a picture. For transcriptomics, mRNA-sequencing technology was used. Genes identified in leaves of C. terniflora at starting point, high level of UV-B irradiation, and high level of UV-B irradiation followed by dark treatment were listed; genes with different expression levels at starting point, high level of UV-B irradiation, and high level of UV-B irradiation followed by dark treatment were also presented in this DiB article. For proteomics, a gel-free/label-free proteomic technique was used. Proteins with different abundances in leaves at starting point, high level of UV-B irradiation, and high level of UV-B irradiation followed by dark treatment were presented in this DiB article. In order to monitor the expression levels of genes under the stress, quantitative reverse transcription polymerase chain reaction was performed. The primer sequences of genes selected for quantitative reverse transcription polymerase chain reaction was presented in this DiB article.
topic Transcriptomics
Proteomics
Clematis terniflora DC
url http://www.sciencedirect.com/science/article/pii/S2352340917300975
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