Comprehensive mutational analysis of background mucosa in patients with Lugol‐voiding lesions
Abstract Somatic mutations including the background mucosa in patients with Lugol‐voiding lesions (LVLs) are still not well known. The aim of this study was to evaluate the somatic mutations of the background mucosa in patients with LVLs (Squamous cell carcinoma (SCC), intraepithelial neoplasia (IN)...
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Language: | English |
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Wiley
2021-06-01
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Series: | Cancer Medicine |
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Online Access: | https://doi.org/10.1002/cam4.3905 |
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doaj-25119e7086a74f44bbf7ce3b4a073458 |
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record_format |
Article |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Naoki Akizue Kenichiro Okimoto Makoto Arai Yosuke Hirotsu Kenji Amemiya Hirotaka Oura Tatsuya Kaneko Mamoru Tokunaga Kentaro Ishikawa Yuki Ohta Takashi Taida Keiko Saito Daisuke Maruoka Tomoaki Matsumura Tomoo Nakagawa Motoi Nishimura Tetsuhiro Chiba Kazuyuki Matsushita Hitoshi Mochizuki Osamu Yokosuka Masao Omata Naoya Kato |
spellingShingle |
Naoki Akizue Kenichiro Okimoto Makoto Arai Yosuke Hirotsu Kenji Amemiya Hirotaka Oura Tatsuya Kaneko Mamoru Tokunaga Kentaro Ishikawa Yuki Ohta Takashi Taida Keiko Saito Daisuke Maruoka Tomoaki Matsumura Tomoo Nakagawa Motoi Nishimura Tetsuhiro Chiba Kazuyuki Matsushita Hitoshi Mochizuki Osamu Yokosuka Masao Omata Naoya Kato Comprehensive mutational analysis of background mucosa in patients with Lugol‐voiding lesions Cancer Medicine background mucosa esophageal squamous cell carcinoma Lugol‐voiding lesions NOTCHI TP53 |
author_facet |
Naoki Akizue Kenichiro Okimoto Makoto Arai Yosuke Hirotsu Kenji Amemiya Hirotaka Oura Tatsuya Kaneko Mamoru Tokunaga Kentaro Ishikawa Yuki Ohta Takashi Taida Keiko Saito Daisuke Maruoka Tomoaki Matsumura Tomoo Nakagawa Motoi Nishimura Tetsuhiro Chiba Kazuyuki Matsushita Hitoshi Mochizuki Osamu Yokosuka Masao Omata Naoya Kato |
author_sort |
Naoki Akizue |
title |
Comprehensive mutational analysis of background mucosa in patients with Lugol‐voiding lesions |
title_short |
Comprehensive mutational analysis of background mucosa in patients with Lugol‐voiding lesions |
title_full |
Comprehensive mutational analysis of background mucosa in patients with Lugol‐voiding lesions |
title_fullStr |
Comprehensive mutational analysis of background mucosa in patients with Lugol‐voiding lesions |
title_full_unstemmed |
Comprehensive mutational analysis of background mucosa in patients with Lugol‐voiding lesions |
title_sort |
comprehensive mutational analysis of background mucosa in patients with lugol‐voiding lesions |
publisher |
Wiley |
series |
Cancer Medicine |
issn |
2045-7634 |
publishDate |
2021-06-01 |
description |
Abstract Somatic mutations including the background mucosa in patients with Lugol‐voiding lesions (LVLs) are still not well known. The aim of this study was to evaluate the somatic mutations of the background mucosa in patients with LVLs (Squamous cell carcinoma (SCC), intraepithelial neoplasia (IN), and hyperplasia). Twenty‐five patients with LVLs (9 with SCC, 6 with IN, and 10 with hyperplasia) were included. A targeted sequence was performed for LVLs and background mucosa using an esophageal cancer panel. Each mutation was checked whether it was oncogenic or not concerning OncoKB. In LVLs, TP53 was the most dominant mutation (80%). Furthermore, 72% of TP53 mutations was putative drivers. In background mucosa, NOTCH1 was the most dominant mutation (88%) and TP53 was the second most dominant mutation (48%). Furthermore, 73% of TP53 mutations and 8% of NOTCH1 mutations were putative drivers. Putative driver mutations of TP53 had significantly higher allele frequency (AF) in SCC than in IN and hyperplasia. Conversely, putative driver mutations of NOTCH1 did not have a significant accumulation of AF in the progression of carcinogenesis. Furthermore, in SCC, AF of TP53 mutations was significantly higher in LVLs than in background mucosa, but not in IN and hyperplasia. Regarding NOTCH1, a significant difference was not observed between LVLs and background mucosa in each group. The background mucosa in patients with LVLs already had putative driver mutations such as TP53 and NOTCH1. Of these two genes, TP53 mutation could be the main target gene of carcinogenesis in esophageal SCC. Clinical Trials registry: UMIN000034247. |
topic |
background mucosa esophageal squamous cell carcinoma Lugol‐voiding lesions NOTCHI TP53 |
url |
https://doi.org/10.1002/cam4.3905 |
work_keys_str_mv |
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1721397241241927680 |
spelling |
doaj-25119e7086a74f44bbf7ce3b4a0734582021-06-05T04:48:49ZengWileyCancer Medicine2045-76342021-06-0110113545355510.1002/cam4.3905Comprehensive mutational analysis of background mucosa in patients with Lugol‐voiding lesionsNaoki Akizue0Kenichiro Okimoto1Makoto Arai2Yosuke Hirotsu3Kenji Amemiya4Hirotaka Oura5Tatsuya Kaneko6Mamoru Tokunaga7Kentaro Ishikawa8Yuki Ohta9Takashi Taida10Keiko Saito11Daisuke Maruoka12Tomoaki Matsumura13Tomoo Nakagawa14Motoi Nishimura15Tetsuhiro Chiba16Kazuyuki Matsushita17Hitoshi Mochizuki18Osamu Yokosuka19Masao Omata20Naoya Kato21Department of Gastroenterology Graduate School of Medicine Chiba University Chiba JapanDepartment of Gastroenterology Graduate School of Medicine Chiba University Chiba JapanDepartment of Gastroenterology Graduate School of Medicine Chiba University Chiba JapanGenome Analysis Center Yamanashi Prefectural Central Hospital Yamanashi JapanGenome Analysis Center Yamanashi Prefectural Central Hospital Yamanashi JapanDepartment of Gastroenterology Graduate School of Medicine Chiba University Chiba JapanDepartment of Gastroenterology Graduate School of Medicine Chiba University Chiba JapanDepartment of Gastroenterology Graduate School of Medicine Chiba University Chiba JapanDepartment of Gastroenterology Graduate School of Medicine Chiba University Chiba JapanDepartment of Gastroenterology Graduate School of Medicine Chiba University Chiba JapanDepartment of Gastroenterology Graduate School of Medicine Chiba University Chiba JapanDepartment of Gastroenterology Graduate School of Medicine Chiba University Chiba JapanDepartment of Gastroenterology Graduate School of Medicine Chiba University Chiba JapanDepartment of Gastroenterology Graduate School of Medicine Chiba University Chiba JapanDepartment of Gastroenterology Graduate School of Medicine Chiba University Chiba JapanDivision of Clinical Genetics and Proteomics Department of Laboratory Medicine Chiba University Hospital Chiba JapanDepartment of Gastroenterology Graduate School of Medicine Chiba University Chiba JapanDivision of Clinical Genetics and Proteomics Department of Laboratory Medicine Chiba University Hospital Chiba JapanGenome Analysis Center Yamanashi Prefectural Central Hospital Yamanashi JapanDepartment of Gastroenterology Japan Community Health care Organization Funabashi Central Hospital Chiba JapanGenome Analysis Center Yamanashi Prefectural Central Hospital Yamanashi JapanDepartment of Gastroenterology Graduate School of Medicine Chiba University Chiba JapanAbstract Somatic mutations including the background mucosa in patients with Lugol‐voiding lesions (LVLs) are still not well known. The aim of this study was to evaluate the somatic mutations of the background mucosa in patients with LVLs (Squamous cell carcinoma (SCC), intraepithelial neoplasia (IN), and hyperplasia). Twenty‐five patients with LVLs (9 with SCC, 6 with IN, and 10 with hyperplasia) were included. A targeted sequence was performed for LVLs and background mucosa using an esophageal cancer panel. Each mutation was checked whether it was oncogenic or not concerning OncoKB. In LVLs, TP53 was the most dominant mutation (80%). Furthermore, 72% of TP53 mutations was putative drivers. In background mucosa, NOTCH1 was the most dominant mutation (88%) and TP53 was the second most dominant mutation (48%). Furthermore, 73% of TP53 mutations and 8% of NOTCH1 mutations were putative drivers. Putative driver mutations of TP53 had significantly higher allele frequency (AF) in SCC than in IN and hyperplasia. Conversely, putative driver mutations of NOTCH1 did not have a significant accumulation of AF in the progression of carcinogenesis. Furthermore, in SCC, AF of TP53 mutations was significantly higher in LVLs than in background mucosa, but not in IN and hyperplasia. Regarding NOTCH1, a significant difference was not observed between LVLs and background mucosa in each group. The background mucosa in patients with LVLs already had putative driver mutations such as TP53 and NOTCH1. Of these two genes, TP53 mutation could be the main target gene of carcinogenesis in esophageal SCC. Clinical Trials registry: UMIN000034247.https://doi.org/10.1002/cam4.3905background mucosaesophageal squamous cell carcinomaLugol‐voiding lesionsNOTCHITP53 |