Genome-Wide Analysis of Dynamin Gene Family in cassava (<i>Manihot esculenta Crantz</i>) and Transcriptional Regulation of Family Members <i>ARC5</i> in Hormonal Treatments

The Dynamin gene family play a significance role in many physiological processes, especially <i>ARC5</i> (Accumulation and replication of chloroplasts 5) in the process of plastid division. We performed a genome-wide analysis of the cassava Dynamin family based on the published cassava g...

Full description

Bibliographic Details
Main Authors: Peng Cao, Xiaohan Liu, Jianchun Guo, Yinhua Chen, Shuangbao Li, Congcong Wang, Wu Huang, Yi Min
Format: Article
Language:English
Published: MDPI AG 2019-10-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:https://www.mdpi.com/1422-0067/20/20/5094
Description
Summary:The Dynamin gene family play a significance role in many physiological processes, especially <i>ARC5</i> (Accumulation and replication of chloroplasts 5) in the process of plastid division. We performed a genome-wide analysis of the cassava Dynamin family based on the published cassava genome sequence and identified <i>ARC5</i>. 23 cassava Dynamins (<i>MeDynamins</i>) were identified and renamed. 23 <i>MeDynamins</i> were further divided into five major groups based on their structural and phylogenetic characteristics. The segmental duplication events have a significant impact on the expansion of MeDynamins. <i>ARC5</i> expression analysis showed that there were differences between leaves and roots of cassava at different developmental stages. The tissue-specific expression analysis of the MeDynamins showed that most of MeDynamins were expressed in stem apical meristem and embryogenesis, whereas ARC5 was mainly expressed in leaves. The processing of IAA (Indole-3-acetic Acid) and MeJA (Methyl Jasmonate) verified the prediction results of cis-elements, and ACR5 was closely related to plant growth and positively correlated. It also indicated that high concentrations of MeJA treatment caused the cassava defense mechanism to function in advance. In conclusion, these findings provide basic insights for functional validation of the ARC5 genes in exogenous hormonal treatments.
ISSN:1422-0067