A nuclear role for the DEAD-box protein Dbp5 in tRNA export

Dbp5 is an essential DEAD-box protein that mediates nuclear mRNP export. Dbp5 also shuttles between nuclear and cytoplasmic compartments with reported roles in transcription, ribosomal subunit export, and translation; however, the mechanism(s) by which nucleocytoplasmic transport occurs and how Dbp5...

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Main Authors: Azra Lari, Arvind Arul Nambi Rajan, Rima Sandhu, Taylor Reiter, Rachel Montpetit, Barry P Young, Chris JR Loewen, Ben Montpetit
Format: Article
Language:English
Published: eLife Sciences Publications Ltd 2019-08-01
Series:eLife
Subjects:
Online Access:https://elifesciences.org/articles/48410
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spelling doaj-233a9e51510c40caa7393c18c350bfef2021-05-05T17:52:42ZengeLife Sciences Publications LtdeLife2050-084X2019-08-01810.7554/eLife.48410A nuclear role for the DEAD-box protein Dbp5 in tRNA exportAzra Lari0https://orcid.org/0000-0002-9649-8231Arvind Arul Nambi Rajan1Rima Sandhu2Taylor Reiter3https://orcid.org/0000-0002-7388-421XRachel Montpetit4Barry P Young5Chris JR Loewen6Ben Montpetit7https://orcid.org/0000-0002-8317-983XDepartment of Cell Biology, University of Alberta, Edmonton, CanadaBiochemistry, Molecular, Cellular and Developmental Biology Graduate Group, University of California, Davis, Davis, United StatesDepartment of Viticulture and Enology, University of California, Davis, Davis, United StatesFood Science Graduate Group, University of California Davis, Davis, United StatesDepartment of Viticulture and Enology, University of California, Davis, Davis, United StatesDepartment of Cellular and Physiological Sciences, Life Sciences Institute, University of British Columbia, Vancouver, CanadaDepartment of Cellular and Physiological Sciences, Life Sciences Institute, University of British Columbia, Vancouver, CanadaDepartment of Cell Biology, University of Alberta, Edmonton, Canada; Biochemistry, Molecular, Cellular and Developmental Biology Graduate Group, University of California, Davis, Davis, United States; Department of Viticulture and Enology, University of California, Davis, Davis, United States; Food Science Graduate Group, University of California Davis, Davis, United StatesDbp5 is an essential DEAD-box protein that mediates nuclear mRNP export. Dbp5 also shuttles between nuclear and cytoplasmic compartments with reported roles in transcription, ribosomal subunit export, and translation; however, the mechanism(s) by which nucleocytoplasmic transport occurs and how Dbp5 specifically contributes to each of these processes remains unclear. Towards understanding the functions and transport of Dbp5 in Saccharomyces cerevisiae, alanine scanning mutagenesis was used to generate point mutants at all possible residues within a GFP-Dbp5 reporter. Characterization of the 456 viable mutants led to the identification of an N-terminal Xpo1-dependent nuclear export signal in Dbp5, in addition to other separation-of-function alleles, which together provide evidence that Dbp5 nuclear shuttling is not essential for mRNP export. Rather, disruptions in Dbp5 nucleocytoplasmic transport result in tRNA export defects, including changes in tRNA shuttling dynamics during recovery from nutrient stress.https://elifesciences.org/articles/48410DEAD-box proteinRNA exportnuclear pore complex
collection DOAJ
language English
format Article
sources DOAJ
author Azra Lari
Arvind Arul Nambi Rajan
Rima Sandhu
Taylor Reiter
Rachel Montpetit
Barry P Young
Chris JR Loewen
Ben Montpetit
spellingShingle Azra Lari
Arvind Arul Nambi Rajan
Rima Sandhu
Taylor Reiter
Rachel Montpetit
Barry P Young
Chris JR Loewen
Ben Montpetit
A nuclear role for the DEAD-box protein Dbp5 in tRNA export
eLife
DEAD-box protein
RNA export
nuclear pore complex
author_facet Azra Lari
Arvind Arul Nambi Rajan
Rima Sandhu
Taylor Reiter
Rachel Montpetit
Barry P Young
Chris JR Loewen
Ben Montpetit
author_sort Azra Lari
title A nuclear role for the DEAD-box protein Dbp5 in tRNA export
title_short A nuclear role for the DEAD-box protein Dbp5 in tRNA export
title_full A nuclear role for the DEAD-box protein Dbp5 in tRNA export
title_fullStr A nuclear role for the DEAD-box protein Dbp5 in tRNA export
title_full_unstemmed A nuclear role for the DEAD-box protein Dbp5 in tRNA export
title_sort nuclear role for the dead-box protein dbp5 in trna export
publisher eLife Sciences Publications Ltd
series eLife
issn 2050-084X
publishDate 2019-08-01
description Dbp5 is an essential DEAD-box protein that mediates nuclear mRNP export. Dbp5 also shuttles between nuclear and cytoplasmic compartments with reported roles in transcription, ribosomal subunit export, and translation; however, the mechanism(s) by which nucleocytoplasmic transport occurs and how Dbp5 specifically contributes to each of these processes remains unclear. Towards understanding the functions and transport of Dbp5 in Saccharomyces cerevisiae, alanine scanning mutagenesis was used to generate point mutants at all possible residues within a GFP-Dbp5 reporter. Characterization of the 456 viable mutants led to the identification of an N-terminal Xpo1-dependent nuclear export signal in Dbp5, in addition to other separation-of-function alleles, which together provide evidence that Dbp5 nuclear shuttling is not essential for mRNP export. Rather, disruptions in Dbp5 nucleocytoplasmic transport result in tRNA export defects, including changes in tRNA shuttling dynamics during recovery from nutrient stress.
topic DEAD-box protein
RNA export
nuclear pore complex
url https://elifesciences.org/articles/48410
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