PnP-AdaNet: Plug-and-Play Adversarial Domain Adaptation Network at Unpaired Cross-Modality Cardiac Segmentation

Deep convolutional networks have demonstrated state-of-the-art performance on various challenging medical image processing tasks. Leveraging images from different modalities for the same analysis task holds large clinical benefits. However, the generalization capability of deep networks on test data...

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Main Authors: Qi Dou, Cheng Ouyang, Cheng Chen, Hao Chen, Ben Glocker, Xiahai Zhuang, Pheng-Ann Heng
Format: Article
Language:English
Published: IEEE 2019-01-01
Series:IEEE Access
Subjects:
Online Access:https://ieeexplore.ieee.org/document/8764342/
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spelling doaj-232dc63aa53a4c52939ff09c110c61372021-04-05T17:25:15ZengIEEEIEEE Access2169-35362019-01-017990659907610.1109/ACCESS.2019.29292588764342PnP-AdaNet: Plug-and-Play Adversarial Domain Adaptation Network at Unpaired Cross-Modality Cardiac SegmentationQi Dou0https://orcid.org/0000-0002-3416-9950Cheng Ouyang1Cheng Chen2Hao Chen3Ben Glocker4Xiahai Zhuang5Pheng-Ann Heng6Department of Computer Science and Engineering, The Chinese University of Hong Kong, Hong KongDepartment of Computing, Imperial College London, London, U.K.Department of Computer Science and Engineering, The Chinese University of Hong Kong, Hong KongDepartment of Computer Science and Engineering, The Chinese University of Hong Kong, Hong KongDepartment of Computing, Imperial College London, London, U.K.School of Data Science, Fudan University, Shanghai, ChinaDepartment of Computer Science and Engineering, The Chinese University of Hong Kong, Hong KongDeep convolutional networks have demonstrated state-of-the-art performance on various challenging medical image processing tasks. Leveraging images from different modalities for the same analysis task holds large clinical benefits. However, the generalization capability of deep networks on test data sampled from different distribution remains as a major challenge. In this paper, we propose a plug-and-play adversarial domain adaptation network (PnP-AdaNet) for adapting segmentation networks between different modalities of medical images, e.g., MRI and CT. We tackle the significant domain shift by aligning the feature spaces of source and target domains at multiple scales in an unsupervised manner. With the adversarial loss, we learn a domain adaptation module which flexibly replaces the early encoder layers of the source network, and the higher layers are shared between two domains. We validate our domain adaptation method on cardiac segmentation in unpaired MRI and CT, with four different anatomical structures. The average Dice achieved 63.9%, which is a significant recover from the complete failure (Dice score of 13.2%) if we directly test an MRI segmentation network on CT data. In addition, our proposed PnP-AdaNet outperforms many state-of-the-art unsupervised domain adaptation approaches on the same dataset. The experimental results with comprehensive ablation studies have demonstrated the excellent efficacy of our proposed method for unsupervised cross-modality domain adaptation. Our code is publically available at https://github.com/carrenD/Medical-Cross-Modality-Domain-Adaptation.https://ieeexplore.ieee.org/document/8764342/Domain adaptationadversarial learningcardiac segmentationmedical imaging
collection DOAJ
language English
format Article
sources DOAJ
author Qi Dou
Cheng Ouyang
Cheng Chen
Hao Chen
Ben Glocker
Xiahai Zhuang
Pheng-Ann Heng
spellingShingle Qi Dou
Cheng Ouyang
Cheng Chen
Hao Chen
Ben Glocker
Xiahai Zhuang
Pheng-Ann Heng
PnP-AdaNet: Plug-and-Play Adversarial Domain Adaptation Network at Unpaired Cross-Modality Cardiac Segmentation
IEEE Access
Domain adaptation
adversarial learning
cardiac segmentation
medical imaging
author_facet Qi Dou
Cheng Ouyang
Cheng Chen
Hao Chen
Ben Glocker
Xiahai Zhuang
Pheng-Ann Heng
author_sort Qi Dou
title PnP-AdaNet: Plug-and-Play Adversarial Domain Adaptation Network at Unpaired Cross-Modality Cardiac Segmentation
title_short PnP-AdaNet: Plug-and-Play Adversarial Domain Adaptation Network at Unpaired Cross-Modality Cardiac Segmentation
title_full PnP-AdaNet: Plug-and-Play Adversarial Domain Adaptation Network at Unpaired Cross-Modality Cardiac Segmentation
title_fullStr PnP-AdaNet: Plug-and-Play Adversarial Domain Adaptation Network at Unpaired Cross-Modality Cardiac Segmentation
title_full_unstemmed PnP-AdaNet: Plug-and-Play Adversarial Domain Adaptation Network at Unpaired Cross-Modality Cardiac Segmentation
title_sort pnp-adanet: plug-and-play adversarial domain adaptation network at unpaired cross-modality cardiac segmentation
publisher IEEE
series IEEE Access
issn 2169-3536
publishDate 2019-01-01
description Deep convolutional networks have demonstrated state-of-the-art performance on various challenging medical image processing tasks. Leveraging images from different modalities for the same analysis task holds large clinical benefits. However, the generalization capability of deep networks on test data sampled from different distribution remains as a major challenge. In this paper, we propose a plug-and-play adversarial domain adaptation network (PnP-AdaNet) for adapting segmentation networks between different modalities of medical images, e.g., MRI and CT. We tackle the significant domain shift by aligning the feature spaces of source and target domains at multiple scales in an unsupervised manner. With the adversarial loss, we learn a domain adaptation module which flexibly replaces the early encoder layers of the source network, and the higher layers are shared between two domains. We validate our domain adaptation method on cardiac segmentation in unpaired MRI and CT, with four different anatomical structures. The average Dice achieved 63.9%, which is a significant recover from the complete failure (Dice score of 13.2%) if we directly test an MRI segmentation network on CT data. In addition, our proposed PnP-AdaNet outperforms many state-of-the-art unsupervised domain adaptation approaches on the same dataset. The experimental results with comprehensive ablation studies have demonstrated the excellent efficacy of our proposed method for unsupervised cross-modality domain adaptation. Our code is publically available at https://github.com/carrenD/Medical-Cross-Modality-Domain-Adaptation.
topic Domain adaptation
adversarial learning
cardiac segmentation
medical imaging
url https://ieeexplore.ieee.org/document/8764342/
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