Analysis of DNA sequences similarity based on a new 3-D graphical representation method

Analysis of DNA sequences similarity based on a new 3-D graphical representation method

Finding the density of specific nucleotides is an important task in DNA sequence analysis. The technique, which is based on graphical representations of DNA sequences, allows for comparison, testing, and storage of different sequences. We create three typical curves in this research based on the cat...

Full description

Bibliographic Details
Main Authors: Kshatrapal SINGH, Ashish KUMAR, Manoj Kumar GUPTA
Format: Article
Language:English
Published: ICI Publishing House 2021-09-01
Series:Revista Română de Informatică și Automatică
Subjects:
similarity analysis
graphical representation
geometrical centers
numerical characterization
Online Access:https://rria.ici.ro/wp-content/uploads/2021/09/art._Singh_Kumar_Gupta.pdf
id doaj-22b35b3909c5467fbc1def922ca05eb0
record_format Article
spelling doaj-22b35b3909c5467fbc1def922ca05eb02021-10-11T08:29:44ZengICI Publishing HouseRevista Română de Informatică și Automatică1220-17581841-43032021-09-0131371410.33436/v31i3y202101Analysis of DNA sequences similarity based on a new 3-D graphical representation methodKshatrapal SINGH0Ashish KUMAR1Manoj Kumar GUPTA2Department of CSE, ITS Engineering College, Greater Noida, IndiaDepartment of CSE, ITS Engineering College, Greater Noida, IndiaSchool of CSE, SMVD University, Katra (J&K), IndiaFinding the density of specific nucleotides is an important task in DNA sequence analysis. The technique, which is based on graphical representations of DNA sequences, allows for comparison, testing, and storage of different sequences. We create three typical curves in this research based on the categorization of four base DNA sequences. The DNA sequence fluctuation and geometrical centers of three curves organized into 12 component vectors were represented. The Euclidean distance between generated vectors is used to study and compare coding sequences for ten different species.https://rria.ici.ro/wp-content/uploads/2021/09/art._Singh_Kumar_Gupta.pdfsimilarity analysisgraphical representationgeometrical centersnumerical characterization
collection DOAJ
language English
format Article
sources DOAJ
author Kshatrapal SINGH
Ashish KUMAR
Manoj Kumar GUPTA
spellingShingle Kshatrapal SINGH
Ashish KUMAR
Manoj Kumar GUPTA
Analysis of DNA sequences similarity based on a new 3-D graphical representation method
Revista Română de Informatică și Automatică
similarity analysis
graphical representation
geometrical centers
numerical characterization
author_facet Kshatrapal SINGH
Ashish KUMAR
Manoj Kumar GUPTA
author_sort Kshatrapal SINGH
title Analysis of DNA sequences similarity based on a new 3-D graphical representation method
title_short Analysis of DNA sequences similarity based on a new 3-D graphical representation method
title_full Analysis of DNA sequences similarity based on a new 3-D graphical representation method
title_fullStr Analysis of DNA sequences similarity based on a new 3-D graphical representation method
title_full_unstemmed Analysis of DNA sequences similarity based on a new 3-D graphical representation method
title_sort analysis of dna sequences similarity based on a new 3-d graphical representation method
publisher ICI Publishing House
series Revista Română de Informatică și Automatică
issn 1220-1758
1841-4303
publishDate 2021-09-01
description Finding the density of specific nucleotides is an important task in DNA sequence analysis. The technique, which is based on graphical representations of DNA sequences, allows for comparison, testing, and storage of different sequences. We create three typical curves in this research based on the categorization of four base DNA sequences. The DNA sequence fluctuation and geometrical centers of three curves organized into 12 component vectors were represented. The Euclidean distance between generated vectors is used to study and compare coding sequences for ten different species.
topic similarity analysis
graphical representation
geometrical centers
numerical characterization
url https://rria.ici.ro/wp-content/uploads/2021/09/art._Singh_Kumar_Gupta.pdf
work_keys_str_mv AT kshatrapalsingh analysisofdnasequencessimilaritybasedonanew3dgraphicalrepresentationmethod
AT ashishkumar analysisofdnasequencessimilaritybasedonanew3dgraphicalrepresentationmethod
AT manojkumargupta analysisofdnasequencessimilaritybasedonanew3dgraphicalrepresentationmethod
_version_ 1716827923711787008

Similar Items