Investigation and Rapid Discrimination of Food-Related Bacteria under Stress Treatments Using IR Microspectroscopy

Because the robust and rapid determination of spoilage microorganisms is becoming increasingly important in industry, the use of IR microspectroscopy, and the establishment of robust and versatile chemometric models for data processing and classification, is gaining importance. To further improve th...

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Main Authors: Daniel Klein, René Breuch, Jessica Reinmüller, Carsten Engelhard, Peter Kaul
Format: Article
Language:English
Published: MDPI AG 2021-08-01
Series:Foods
Subjects:
Online Access:https://www.mdpi.com/2304-8158/10/8/1850
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spelling doaj-2253b3df20fd4438adf607a3d26b3b012021-08-26T13:45:22ZengMDPI AGFoods2304-81582021-08-01101850185010.3390/foods10081850Investigation and Rapid Discrimination of Food-Related Bacteria under Stress Treatments Using IR MicrospectroscopyDaniel Klein0René Breuch1Jessica Reinmüller2Carsten Engelhard3Peter Kaul4Institute of Safety and Security Research, Bonn-Rhein-Sieg University of Applied Sciences, Von-Liebig-Straße 20, 53359 Rheinbach, GermanyInstitute of Safety and Security Research, Bonn-Rhein-Sieg University of Applied Sciences, Von-Liebig-Straße 20, 53359 Rheinbach, GermanyInstitute of Safety and Security Research, Bonn-Rhein-Sieg University of Applied Sciences, Von-Liebig-Straße 20, 53359 Rheinbach, GermanyDepartment of Chemistry and Biology, University of Siegen, Adolf-Reichwein-Str. 2, 57076 Siegen, GermanyInstitute of Safety and Security Research, Bonn-Rhein-Sieg University of Applied Sciences, Von-Liebig-Straße 20, 53359 Rheinbach, GermanyBecause the robust and rapid determination of spoilage microorganisms is becoming increasingly important in industry, the use of IR microspectroscopy, and the establishment of robust and versatile chemometric models for data processing and classification, is gaining importance. To further improve the chemometric models, bacterial stress responses were induced, to study the effect on the IR spectra and to improve the chemometric model. Thus, in this work, nine important food-relevant microorganisms were subjected to eight stress conditions, besides the regular culturing as a reference. Spectral changes compared to normal growth conditions without stressors were found in the spectral regions of 900–1500 cm<sup>−1</sup> and 1500–1700 cm<sup>−1</sup>. These differences might stem from changes in the protein secondary structure, exopolymer production, and concentration of nucleic acids, lipids, and polysaccharides. As a result, a model for the discrimination of the studied microorganisms at the genus, species and strain level was established, with an accuracy of 96.6%. This was achieved despite the inclusion of various stress conditions and times after incubation of the bacteria. In addition, a model was developed for each individual microorganism, to separate each stress condition or regular treatment with 100% accuracy.https://www.mdpi.com/2304-8158/10/8/1850IR microspectroscopyfood-related bacteriaclassificationdiscriminant analysisstress responsefood safety
collection DOAJ
language English
format Article
sources DOAJ
author Daniel Klein
René Breuch
Jessica Reinmüller
Carsten Engelhard
Peter Kaul
spellingShingle Daniel Klein
René Breuch
Jessica Reinmüller
Carsten Engelhard
Peter Kaul
Investigation and Rapid Discrimination of Food-Related Bacteria under Stress Treatments Using IR Microspectroscopy
Foods
IR microspectroscopy
food-related bacteria
classification
discriminant analysis
stress response
food safety
author_facet Daniel Klein
René Breuch
Jessica Reinmüller
Carsten Engelhard
Peter Kaul
author_sort Daniel Klein
title Investigation and Rapid Discrimination of Food-Related Bacteria under Stress Treatments Using IR Microspectroscopy
title_short Investigation and Rapid Discrimination of Food-Related Bacteria under Stress Treatments Using IR Microspectroscopy
title_full Investigation and Rapid Discrimination of Food-Related Bacteria under Stress Treatments Using IR Microspectroscopy
title_fullStr Investigation and Rapid Discrimination of Food-Related Bacteria under Stress Treatments Using IR Microspectroscopy
title_full_unstemmed Investigation and Rapid Discrimination of Food-Related Bacteria under Stress Treatments Using IR Microspectroscopy
title_sort investigation and rapid discrimination of food-related bacteria under stress treatments using ir microspectroscopy
publisher MDPI AG
series Foods
issn 2304-8158
publishDate 2021-08-01
description Because the robust and rapid determination of spoilage microorganisms is becoming increasingly important in industry, the use of IR microspectroscopy, and the establishment of robust and versatile chemometric models for data processing and classification, is gaining importance. To further improve the chemometric models, bacterial stress responses were induced, to study the effect on the IR spectra and to improve the chemometric model. Thus, in this work, nine important food-relevant microorganisms were subjected to eight stress conditions, besides the regular culturing as a reference. Spectral changes compared to normal growth conditions without stressors were found in the spectral regions of 900–1500 cm<sup>−1</sup> and 1500–1700 cm<sup>−1</sup>. These differences might stem from changes in the protein secondary structure, exopolymer production, and concentration of nucleic acids, lipids, and polysaccharides. As a result, a model for the discrimination of the studied microorganisms at the genus, species and strain level was established, with an accuracy of 96.6%. This was achieved despite the inclusion of various stress conditions and times after incubation of the bacteria. In addition, a model was developed for each individual microorganism, to separate each stress condition or regular treatment with 100% accuracy.
topic IR microspectroscopy
food-related bacteria
classification
discriminant analysis
stress response
food safety
url https://www.mdpi.com/2304-8158/10/8/1850
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