Concerted Flexibility of Chromatin Structure, Methylome, and Histone Modifications along with Plant Stress Responses

The spatial organization of chromosome structure within the interphase nucleus, as well as the patterns of methylome and histone modifications, represent intersecting layers that influence genome accessibility and function. This review is focused on the plastic nature of chromatin structure and epig...

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Main Authors: Ana Paula Santos, Liliana J. Ferreira, M. Margarida Oliveira
Format: Article
Language:English
Published: MDPI AG 2017-01-01
Series:Biology
Subjects:
Online Access:http://www.mdpi.com/2079-7737/6/1/3
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spelling doaj-21c823c790de4e86a2d540c58f4e91432020-11-24T23:37:50ZengMDPI AGBiology2079-77372017-01-0161310.3390/biology6010003biology6010003Concerted Flexibility of Chromatin Structure, Methylome, and Histone Modifications along with Plant Stress ResponsesAna Paula Santos0Liliana J. Ferreira1M. Margarida Oliveira2Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa, Genomics of Plant Stress Unit. Av. da República, 2780-157 Oeiras, PortugalInstituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa, Genomics of Plant Stress Unit. Av. da República, 2780-157 Oeiras, PortugalInstituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa, Genomics of Plant Stress Unit. Av. da República, 2780-157 Oeiras, PortugalThe spatial organization of chromosome structure within the interphase nucleus, as well as the patterns of methylome and histone modifications, represent intersecting layers that influence genome accessibility and function. This review is focused on the plastic nature of chromatin structure and epigenetic marks in association to stress situations. The use of chemical compounds (epigenetic drugs) or T-DNA-mediated mutagenesis affecting epigenetic regulators (epi-mutants) are discussed as being important tools for studying the impact of deregulated epigenetic backgrounds on gene function and phenotype. The inheritability of epigenetic marks and chromatin configurations along successive generations are interpreted as a way for plants to “communicate” past experiences of stress sensing. A mechanistic understanding of chromatin and epigenetics plasticity in plant response to stress, including tissue- and genotype-specific epigenetic patterns, may help to reveal the epigenetics contributions for genome and phenotype regulation.http://www.mdpi.com/2079-7737/6/1/3chromatin structureepigeneticsDNA methylationhistone modificationsepi-drugsepi-mutations
collection DOAJ
language English
format Article
sources DOAJ
author Ana Paula Santos
Liliana J. Ferreira
M. Margarida Oliveira
spellingShingle Ana Paula Santos
Liliana J. Ferreira
M. Margarida Oliveira
Concerted Flexibility of Chromatin Structure, Methylome, and Histone Modifications along with Plant Stress Responses
Biology
chromatin structure
epigenetics
DNA methylation
histone modifications
epi-drugs
epi-mutations
author_facet Ana Paula Santos
Liliana J. Ferreira
M. Margarida Oliveira
author_sort Ana Paula Santos
title Concerted Flexibility of Chromatin Structure, Methylome, and Histone Modifications along with Plant Stress Responses
title_short Concerted Flexibility of Chromatin Structure, Methylome, and Histone Modifications along with Plant Stress Responses
title_full Concerted Flexibility of Chromatin Structure, Methylome, and Histone Modifications along with Plant Stress Responses
title_fullStr Concerted Flexibility of Chromatin Structure, Methylome, and Histone Modifications along with Plant Stress Responses
title_full_unstemmed Concerted Flexibility of Chromatin Structure, Methylome, and Histone Modifications along with Plant Stress Responses
title_sort concerted flexibility of chromatin structure, methylome, and histone modifications along with plant stress responses
publisher MDPI AG
series Biology
issn 2079-7737
publishDate 2017-01-01
description The spatial organization of chromosome structure within the interphase nucleus, as well as the patterns of methylome and histone modifications, represent intersecting layers that influence genome accessibility and function. This review is focused on the plastic nature of chromatin structure and epigenetic marks in association to stress situations. The use of chemical compounds (epigenetic drugs) or T-DNA-mediated mutagenesis affecting epigenetic regulators (epi-mutants) are discussed as being important tools for studying the impact of deregulated epigenetic backgrounds on gene function and phenotype. The inheritability of epigenetic marks and chromatin configurations along successive generations are interpreted as a way for plants to “communicate” past experiences of stress sensing. A mechanistic understanding of chromatin and epigenetics plasticity in plant response to stress, including tissue- and genotype-specific epigenetic patterns, may help to reveal the epigenetics contributions for genome and phenotype regulation.
topic chromatin structure
epigenetics
DNA methylation
histone modifications
epi-drugs
epi-mutations
url http://www.mdpi.com/2079-7737/6/1/3
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