A Robust Model for Circadian Redox Oscillations
The circadian clock is an endogenous oscillator that controls daily rhythms in metabolism, physiology, and behavior. Although the timekeeping components differ among species, a common design principle is a transcription-translation negative feedback loop. However, it is becoming clear that other mec...
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doaj-208e3688369b4f6a8e88cbc38a3680752020-11-25T00:14:19ZengMDPI AGInternational Journal of Molecular Sciences1422-00672019-05-01209236810.3390/ijms20092368ijms20092368A Robust Model for Circadian Redox OscillationsMarta del Olmo0Achim Kramer1Hanspeter Herzel2Institute for Theoretical Biology, Charité and Humboldt-Universität zu Berlin, 10115 Berlin, GermanyLaboratory of Chronobiology, Charité-Universitätsmedizin Berlin, 10117 Berlin, GermanyInstitute for Theoretical Biology, Charité and Humboldt-Universität zu Berlin, 10115 Berlin, GermanyThe circadian clock is an endogenous oscillator that controls daily rhythms in metabolism, physiology, and behavior. Although the timekeeping components differ among species, a common design principle is a transcription-translation negative feedback loop. However, it is becoming clear that other mechanisms can contribute to the generation of 24 h rhythms. Peroxiredoxins (Prxs) exhibit 24 h rhythms in their redox state in all kingdoms of life. In mammalian adrenal gland, heart and brown adipose tissue, such rhythms are generated as a result of an inactivating hyperoxidation reaction that is reduced by coordinated import of sulfiredoxin (Srx) into the mitochondria. However, a quantitative description of the Prx/Srx oscillating system is still missing. We investigate the basic principles that generate mitochondrial Prx/Srx rhythms using computational modeling. We observe that the previously described delay in mitochondrial Srx import, in combination with an appropriate separation of fast and slow reactions, is sufficient to generate robust self-sustained relaxation-like oscillations. We find that our conceptual model can be regarded as a series of three consecutive phases and two temporal switches, highlighting the importance of delayed negative feedback and switches in the generation of oscillations.https://www.mdpi.com/1422-0067/20/9/2368redoxoscillationsmathematical modelingnegative feedbackfast vs. slow reactionsphasesswitches |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Marta del Olmo Achim Kramer Hanspeter Herzel |
spellingShingle |
Marta del Olmo Achim Kramer Hanspeter Herzel A Robust Model for Circadian Redox Oscillations International Journal of Molecular Sciences redox oscillations mathematical modeling negative feedback fast vs. slow reactions phases switches |
author_facet |
Marta del Olmo Achim Kramer Hanspeter Herzel |
author_sort |
Marta del Olmo |
title |
A Robust Model for Circadian Redox Oscillations |
title_short |
A Robust Model for Circadian Redox Oscillations |
title_full |
A Robust Model for Circadian Redox Oscillations |
title_fullStr |
A Robust Model for Circadian Redox Oscillations |
title_full_unstemmed |
A Robust Model for Circadian Redox Oscillations |
title_sort |
robust model for circadian redox oscillations |
publisher |
MDPI AG |
series |
International Journal of Molecular Sciences |
issn |
1422-0067 |
publishDate |
2019-05-01 |
description |
The circadian clock is an endogenous oscillator that controls daily rhythms in metabolism, physiology, and behavior. Although the timekeeping components differ among species, a common design principle is a transcription-translation negative feedback loop. However, it is becoming clear that other mechanisms can contribute to the generation of 24 h rhythms. Peroxiredoxins (Prxs) exhibit 24 h rhythms in their redox state in all kingdoms of life. In mammalian adrenal gland, heart and brown adipose tissue, such rhythms are generated as a result of an inactivating hyperoxidation reaction that is reduced by coordinated import of sulfiredoxin (Srx) into the mitochondria. However, a quantitative description of the Prx/Srx oscillating system is still missing. We investigate the basic principles that generate mitochondrial Prx/Srx rhythms using computational modeling. We observe that the previously described delay in mitochondrial Srx import, in combination with an appropriate separation of fast and slow reactions, is sufficient to generate robust self-sustained relaxation-like oscillations. We find that our conceptual model can be regarded as a series of three consecutive phases and two temporal switches, highlighting the importance of delayed negative feedback and switches in the generation of oscillations. |
topic |
redox oscillations mathematical modeling negative feedback fast vs. slow reactions phases switches |
url |
https://www.mdpi.com/1422-0067/20/9/2368 |
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