A Robust Model for Circadian Redox Oscillations

The circadian clock is an endogenous oscillator that controls daily rhythms in metabolism, physiology, and behavior. Although the timekeeping components differ among species, a common design principle is a transcription-translation negative feedback loop. However, it is becoming clear that other mec...

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Main Authors: Marta del Olmo, Achim Kramer, Hanspeter Herzel
Format: Article
Language:English
Published: MDPI AG 2019-05-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:https://www.mdpi.com/1422-0067/20/9/2368
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spelling doaj-208e3688369b4f6a8e88cbc38a3680752020-11-25T00:14:19ZengMDPI AGInternational Journal of Molecular Sciences1422-00672019-05-01209236810.3390/ijms20092368ijms20092368A Robust Model for Circadian Redox OscillationsMarta del Olmo0Achim Kramer1Hanspeter Herzel2Institute for Theoretical Biology, Charité and Humboldt-Universität zu Berlin, 10115 Berlin, GermanyLaboratory of Chronobiology, Charité-Universitätsmedizin Berlin, 10117 Berlin, GermanyInstitute for Theoretical Biology, Charité and Humboldt-Universität zu Berlin, 10115 Berlin, GermanyThe circadian clock is an endogenous oscillator that controls daily rhythms in metabolism, physiology, and behavior. Although the timekeeping components differ among species, a common design principle is a transcription-translation negative feedback loop. However, it is becoming clear that other mechanisms can contribute to the generation of 24 h rhythms. Peroxiredoxins (Prxs) exhibit 24 h rhythms in their redox state in all kingdoms of life. In mammalian adrenal gland, heart and brown adipose tissue, such rhythms are generated as a result of an inactivating hyperoxidation reaction that is reduced by coordinated import of sulfiredoxin (Srx) into the mitochondria. However, a quantitative description of the Prx/Srx oscillating system is still missing. We investigate the basic principles that generate mitochondrial Prx/Srx rhythms using computational modeling. We observe that the previously described delay in mitochondrial Srx import, in combination with an appropriate separation of fast and slow reactions, is sufficient to generate robust self-sustained relaxation-like oscillations. We find that our conceptual model can be regarded as a series of three consecutive phases and two temporal switches, highlighting the importance of delayed negative feedback and switches in the generation of oscillations.https://www.mdpi.com/1422-0067/20/9/2368redoxoscillationsmathematical modelingnegative feedbackfast vs. slow reactionsphasesswitches
collection DOAJ
language English
format Article
sources DOAJ
author Marta del Olmo
Achim Kramer
Hanspeter Herzel
spellingShingle Marta del Olmo
Achim Kramer
Hanspeter Herzel
A Robust Model for Circadian Redox Oscillations
International Journal of Molecular Sciences
redox
oscillations
mathematical modeling
negative feedback
fast vs. slow reactions
phases
switches
author_facet Marta del Olmo
Achim Kramer
Hanspeter Herzel
author_sort Marta del Olmo
title A Robust Model for Circadian Redox Oscillations
title_short A Robust Model for Circadian Redox Oscillations
title_full A Robust Model for Circadian Redox Oscillations
title_fullStr A Robust Model for Circadian Redox Oscillations
title_full_unstemmed A Robust Model for Circadian Redox Oscillations
title_sort robust model for circadian redox oscillations
publisher MDPI AG
series International Journal of Molecular Sciences
issn 1422-0067
publishDate 2019-05-01
description The circadian clock is an endogenous oscillator that controls daily rhythms in metabolism, physiology, and behavior. Although the timekeeping components differ among species, a common design principle is a transcription-translation negative feedback loop. However, it is becoming clear that other mechanisms can contribute to the generation of 24 h rhythms. Peroxiredoxins (Prxs) exhibit 24 h rhythms in their redox state in all kingdoms of life. In mammalian adrenal gland, heart and brown adipose tissue, such rhythms are generated as a result of an inactivating hyperoxidation reaction that is reduced by coordinated import of sulfiredoxin (Srx) into the mitochondria. However, a quantitative description of the Prx/Srx oscillating system is still missing. We investigate the basic principles that generate mitochondrial Prx/Srx rhythms using computational modeling. We observe that the previously described delay in mitochondrial Srx import, in combination with an appropriate separation of fast and slow reactions, is sufficient to generate robust self-sustained relaxation-like oscillations. We find that our conceptual model can be regarded as a series of three consecutive phases and two temporal switches, highlighting the importance of delayed negative feedback and switches in the generation of oscillations.
topic redox
oscillations
mathematical modeling
negative feedback
fast vs. slow reactions
phases
switches
url https://www.mdpi.com/1422-0067/20/9/2368
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