Molecular Characterization of Acanthamoeba Isolates from Surface Resting Waters in Northwest Iran

Background: Acanthamoeba is an opportunistic amphizoic protozoan found in different fresh water sources. The aim of this study was to identify and characterize Acanthamoeba isolates from surface resting waters, in Northwest Iran. Methods: Samples were collected from twenty-two different areas, bet...

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Main Authors: Esmaeil FALLAH, Zahra JAFARPOUR, Mahmoud MAHAMI-OSKOUEI, Ali HAGHIGHI, Maryam NIYYATI, Adel SPOTIN, Aram KHEZRI
Format: Article
Language:English
Published: Tehran University of Medical Sciences 2017-09-01
Series:Iranian Journal of Parasitology
Subjects:
PCR
Online Access:https://ijpa.tums.ac.ir/index.php/ijpa/article/view/1766
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spelling doaj-204b2a9ee2094b4184c50ecb89328db42021-04-02T17:47:16ZengTehran University of Medical SciencesIranian Journal of Parasitology1735-70202008-238X2017-09-01123675Molecular Characterization of Acanthamoeba Isolates from Surface Resting Waters in Northwest IranEsmaeil FALLAH0Zahra JAFARPOUR1Mahmoud MAHAMI-OSKOUEI2Ali HAGHIGHI3Maryam NIYYATI4Adel SPOTIN5Aram KHEZRI6Immunology Research Center, Tabriz University of Medical Sciences, Tabriz, Iran AND Dept. of Parasitology and Mycology, Faculty of Medicine, Tabriz University of Medical Sciences, Tabriz, IranImmunology Research Center, Tabriz University of Medical Sciences, Tabriz, Iran AND Dept. of Parasitology and Mycology, Faculty of Medicine, Tabriz University of Medical Sciences, Tabriz, IranImmunology Research Center, Tabriz University of Medical Sciences, Tabriz, Iran AND Dept. of Parasitology and Mycology, Faculty of Medicine, Tabriz University of Medical Sciences, Tabriz, IranDept. of Parasitology, School of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, IranDept. of Parasitology, School of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, IranImmunology Research Center, Tabriz University of Medical Sciences, Tabriz, Iran AND Dept. of Parasitology and Mycology, Faculty of Medicine, Tabriz University of Medical Sciences, Tabriz, IranDept. of Parasitology and Mycology, Faculty of Medicine, Tabriz University of Medical Sciences, Tabriz, Iran Background: Acanthamoeba is an opportunistic amphizoic protozoan found in different fresh water sources. The aim of this study was to identify and characterize Acanthamoeba isolates from surface resting waters, in Northwest Iran. Methods: Samples were collected from twenty-two different areas, between May and Sep 2014. After filtration, samples were cultivated on non-nutrient agar. The extracted DNAs were amplified and sequenced using partial 18S rRNA in order to genotype and phylogenetic analyses. Results: Thirty-four (68%) out of 50 collected samples were positive for free-living amoebae based on both culture and morphological characterizations but 28 samples were identified as Acanthamoeba spp. by PCR. Sequentially, one isolate was identified as A. lenticulata, (T5) (AN: KP940443, identity 99.7%-100%, and divergence 0.3%) whilst other sequenced isolates identified Acanthamoeba spp. (AN: KP940444-45) as very similar to A. rhysodes and A. royreba with identity 100% and divergence 0%. Conclusion: Surface resting waters in Northwest Iran, were potentially contaminated with pathogenic amphizoic protozoan. Further studies will be required to determine other Acanthamoeba species and genotypes in the region. https://ijpa.tums.ac.ir/index.php/ijpa/article/view/1766AcanthamoebaSurface waterPCRIran
collection DOAJ
language English
format Article
sources DOAJ
author Esmaeil FALLAH
Zahra JAFARPOUR
Mahmoud MAHAMI-OSKOUEI
Ali HAGHIGHI
Maryam NIYYATI
Adel SPOTIN
Aram KHEZRI
spellingShingle Esmaeil FALLAH
Zahra JAFARPOUR
Mahmoud MAHAMI-OSKOUEI
Ali HAGHIGHI
Maryam NIYYATI
Adel SPOTIN
Aram KHEZRI
Molecular Characterization of Acanthamoeba Isolates from Surface Resting Waters in Northwest Iran
Iranian Journal of Parasitology
Acanthamoeba
Surface water
PCR
Iran
author_facet Esmaeil FALLAH
Zahra JAFARPOUR
Mahmoud MAHAMI-OSKOUEI
Ali HAGHIGHI
Maryam NIYYATI
Adel SPOTIN
Aram KHEZRI
author_sort Esmaeil FALLAH
title Molecular Characterization of Acanthamoeba Isolates from Surface Resting Waters in Northwest Iran
title_short Molecular Characterization of Acanthamoeba Isolates from Surface Resting Waters in Northwest Iran
title_full Molecular Characterization of Acanthamoeba Isolates from Surface Resting Waters in Northwest Iran
title_fullStr Molecular Characterization of Acanthamoeba Isolates from Surface Resting Waters in Northwest Iran
title_full_unstemmed Molecular Characterization of Acanthamoeba Isolates from Surface Resting Waters in Northwest Iran
title_sort molecular characterization of acanthamoeba isolates from surface resting waters in northwest iran
publisher Tehran University of Medical Sciences
series Iranian Journal of Parasitology
issn 1735-7020
2008-238X
publishDate 2017-09-01
description Background: Acanthamoeba is an opportunistic amphizoic protozoan found in different fresh water sources. The aim of this study was to identify and characterize Acanthamoeba isolates from surface resting waters, in Northwest Iran. Methods: Samples were collected from twenty-two different areas, between May and Sep 2014. After filtration, samples were cultivated on non-nutrient agar. The extracted DNAs were amplified and sequenced using partial 18S rRNA in order to genotype and phylogenetic analyses. Results: Thirty-four (68%) out of 50 collected samples were positive for free-living amoebae based on both culture and morphological characterizations but 28 samples were identified as Acanthamoeba spp. by PCR. Sequentially, one isolate was identified as A. lenticulata, (T5) (AN: KP940443, identity 99.7%-100%, and divergence 0.3%) whilst other sequenced isolates identified Acanthamoeba spp. (AN: KP940444-45) as very similar to A. rhysodes and A. royreba with identity 100% and divergence 0%. Conclusion: Surface resting waters in Northwest Iran, were potentially contaminated with pathogenic amphizoic protozoan. Further studies will be required to determine other Acanthamoeba species and genotypes in the region.
topic Acanthamoeba
Surface water
PCR
Iran
url https://ijpa.tums.ac.ir/index.php/ijpa/article/view/1766
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