Simple and easy estimation of network properties based on linear correlation analysis

An ecological network can be constructed by calculating the sampling data of taxon by sample type. A statistically significant Pearson linear correlation means an indirect or direct linear interaction between two taxa, and a statistically significant partial (net, or pure) correlation based on Pears...

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Main Author: Yanhong Qi
Format: Article
Language:English
Published: International Academy of Ecology and Environmental Sciences 2015-12-01
Series:Network Biology
Subjects:
Online Access:http://www.iaees.org/publications/journals/nb/articles/2015-5(4)/simple-and-easy-estimation-of-network-properties.pdf
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spelling doaj-1f01c419108546669c477f3cc001e4392020-11-24T22:33:39ZengInternational Academy of Ecology and Environmental SciencesNetwork Biology2220-88792220-88792015-12-0154180184Simple and easy estimation of network properties based on linear correlation analysisYanhong Qi0Sun Yat-sen University Libraries, Sun Yat-sen University, Guangzhou 510275, ChinaAn ecological network can be constructed by calculating the sampling data of taxon by sample type. A statistically significant Pearson linear correlation means an indirect or direct linear interaction between two taxa, and a statistically significant partial (net, or pure) correlation based on Pearson linear correlation means a candidate direct linear interaction between two taxa. In many cases, statistically significant partial correlations are not available, or we only need to estimate some of network properties. Based on sampling data of arthropods in different countries and periods, in present study I proved that the number of candidate direct linear interactions (y) increases with the number of indirect + direct linear interactions (x) calculated by Pearson linear correlation (y=-0.2757+0.5343x, r2=0.859, p<0.00001), and the former is approximately half of the later. The proportion of candidate direct interactions in possible maximum interactions (y percent) is approximately two-thirds of mean Pearson linear correlation (x) (y=1.9060+64.6084x, r2=0.339, p=0.023). These conclusions are expected to provide simple and easy quantities to estimate some of network properties.http://www.iaees.org/publications/journals/nb/articles/2015-5(4)/simple-and-easy-estimation-of-network-properties.pdfnetworkdirection interactionsPearson linear correlationpartial linear correlationestimation
collection DOAJ
language English
format Article
sources DOAJ
author Yanhong Qi
spellingShingle Yanhong Qi
Simple and easy estimation of network properties based on linear correlation analysis
Network Biology
network
direction interactions
Pearson linear correlation
partial linear correlation
estimation
author_facet Yanhong Qi
author_sort Yanhong Qi
title Simple and easy estimation of network properties based on linear correlation analysis
title_short Simple and easy estimation of network properties based on linear correlation analysis
title_full Simple and easy estimation of network properties based on linear correlation analysis
title_fullStr Simple and easy estimation of network properties based on linear correlation analysis
title_full_unstemmed Simple and easy estimation of network properties based on linear correlation analysis
title_sort simple and easy estimation of network properties based on linear correlation analysis
publisher International Academy of Ecology and Environmental Sciences
series Network Biology
issn 2220-8879
2220-8879
publishDate 2015-12-01
description An ecological network can be constructed by calculating the sampling data of taxon by sample type. A statistically significant Pearson linear correlation means an indirect or direct linear interaction between two taxa, and a statistically significant partial (net, or pure) correlation based on Pearson linear correlation means a candidate direct linear interaction between two taxa. In many cases, statistically significant partial correlations are not available, or we only need to estimate some of network properties. Based on sampling data of arthropods in different countries and periods, in present study I proved that the number of candidate direct linear interactions (y) increases with the number of indirect + direct linear interactions (x) calculated by Pearson linear correlation (y=-0.2757+0.5343x, r2=0.859, p<0.00001), and the former is approximately half of the later. The proportion of candidate direct interactions in possible maximum interactions (y percent) is approximately two-thirds of mean Pearson linear correlation (x) (y=1.9060+64.6084x, r2=0.339, p=0.023). These conclusions are expected to provide simple and easy quantities to estimate some of network properties.
topic network
direction interactions
Pearson linear correlation
partial linear correlation
estimation
url http://www.iaees.org/publications/journals/nb/articles/2015-5(4)/simple-and-easy-estimation-of-network-properties.pdf
work_keys_str_mv AT yanhongqi simpleandeasyestimationofnetworkpropertiesbasedonlinearcorrelationanalysis
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