Altered Gene Expression in the Testis of Infertile Patients with Nonobstructive Azoospermia

Background. The molecular mechanism of nonobstructive azoospermia (NOA) remains unclear. The aim of this study was to identify gene expression changes in NOA patients and to explore potential biomarkers and therapeutic targets. Methods. The gene expression profiles of GSE45885 and GSE145467 were col...

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Main Authors: Zhiqiang Wang, Zhongjun Ding, Yan Guan, Chunhui Liu, Linjun Wang, Wensheng Shan, Jie Yang
Format: Article
Language:English
Published: Hindawi Limited 2021-01-01
Series:Computational and Mathematical Methods in Medicine
Online Access:http://dx.doi.org/10.1155/2021/5533483
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spelling doaj-1e7137c1eaca49658e4355f332c7b9e22021-06-21T02:25:01ZengHindawi LimitedComputational and Mathematical Methods in Medicine1748-67182021-01-01202110.1155/2021/5533483Altered Gene Expression in the Testis of Infertile Patients with Nonobstructive AzoospermiaZhiqiang Wang0Zhongjun Ding1Yan Guan2Chunhui Liu3Linjun Wang4Wensheng Shan5Jie Yang6Gansu Provincial Maternal and Children Health Care HospitalGansu Provincial Maternal and Children Health Care HospitalAffiliated Hospital of Gansu University of Chinese MedicineGansu Provincial Maternal and Children Health Care HospitalGansu Provincial Maternal and Children Health Care HospitalGansu Provincial Maternal and Children Health Care HospitalGansu Provincial Maternal and Children Health Care HospitalBackground. The molecular mechanism of nonobstructive azoospermia (NOA) remains unclear. The aim of this study was to identify gene expression changes in NOA patients and to explore potential biomarkers and therapeutic targets. Methods. The gene expression profiles of GSE45885 and GSE145467 were collected from the Gene Expression Omnibus (GEO) database, and the differences between NOA and normal spermatogenesis were analyzed. Enrichment analysis was performed to explore biological functions for common differentially expressed genes (DEGs) in GSE45885 and GSE145467. Coexpression analysis of DEGs in GSE45885 was performed, and two modules with the highest correlation with NOA were screened. Key genes were then screened from the intersection genes of the two modules and common DEGs and PPI network. The expression of key genes was validated by quantitative real-time polymerase chain reaction (qRT-PCR) experiments. Finally, through miRTarBase, miRDB, and RAID, the miRNAs were predicted to regulate key genes, respectively. Results. A total of 345 common DEGs were identified and they were mainly related to spermatogenesis, insulin signaling pathway. Coexpression analysis of DEGs in GSE45885 yielded eight modules; MEblack and MEturquoise had the highest correlation with NOA. Six genes in MEturquoise and RNF141 in MEblack were identified as key genes. qRT-PCR experiments validated the differential expression of key genes between NOA and control. Furthermore, RNF141 was regulated by the largest number of miRNAs. Conclusion. Our findings suggest that the significant change expression of key genes may be potential markers and therapeutic targets of NOA and may have some impact on the development of NOA.http://dx.doi.org/10.1155/2021/5533483
collection DOAJ
language English
format Article
sources DOAJ
author Zhiqiang Wang
Zhongjun Ding
Yan Guan
Chunhui Liu
Linjun Wang
Wensheng Shan
Jie Yang
spellingShingle Zhiqiang Wang
Zhongjun Ding
Yan Guan
Chunhui Liu
Linjun Wang
Wensheng Shan
Jie Yang
Altered Gene Expression in the Testis of Infertile Patients with Nonobstructive Azoospermia
Computational and Mathematical Methods in Medicine
author_facet Zhiqiang Wang
Zhongjun Ding
Yan Guan
Chunhui Liu
Linjun Wang
Wensheng Shan
Jie Yang
author_sort Zhiqiang Wang
title Altered Gene Expression in the Testis of Infertile Patients with Nonobstructive Azoospermia
title_short Altered Gene Expression in the Testis of Infertile Patients with Nonobstructive Azoospermia
title_full Altered Gene Expression in the Testis of Infertile Patients with Nonobstructive Azoospermia
title_fullStr Altered Gene Expression in the Testis of Infertile Patients with Nonobstructive Azoospermia
title_full_unstemmed Altered Gene Expression in the Testis of Infertile Patients with Nonobstructive Azoospermia
title_sort altered gene expression in the testis of infertile patients with nonobstructive azoospermia
publisher Hindawi Limited
series Computational and Mathematical Methods in Medicine
issn 1748-6718
publishDate 2021-01-01
description Background. The molecular mechanism of nonobstructive azoospermia (NOA) remains unclear. The aim of this study was to identify gene expression changes in NOA patients and to explore potential biomarkers and therapeutic targets. Methods. The gene expression profiles of GSE45885 and GSE145467 were collected from the Gene Expression Omnibus (GEO) database, and the differences between NOA and normal spermatogenesis were analyzed. Enrichment analysis was performed to explore biological functions for common differentially expressed genes (DEGs) in GSE45885 and GSE145467. Coexpression analysis of DEGs in GSE45885 was performed, and two modules with the highest correlation with NOA were screened. Key genes were then screened from the intersection genes of the two modules and common DEGs and PPI network. The expression of key genes was validated by quantitative real-time polymerase chain reaction (qRT-PCR) experiments. Finally, through miRTarBase, miRDB, and RAID, the miRNAs were predicted to regulate key genes, respectively. Results. A total of 345 common DEGs were identified and they were mainly related to spermatogenesis, insulin signaling pathway. Coexpression analysis of DEGs in GSE45885 yielded eight modules; MEblack and MEturquoise had the highest correlation with NOA. Six genes in MEturquoise and RNF141 in MEblack were identified as key genes. qRT-PCR experiments validated the differential expression of key genes between NOA and control. Furthermore, RNF141 was regulated by the largest number of miRNAs. Conclusion. Our findings suggest that the significant change expression of key genes may be potential markers and therapeutic targets of NOA and may have some impact on the development of NOA.
url http://dx.doi.org/10.1155/2021/5533483
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