Follow-Up SARS-CoV-2 PCR Testing Outcomes From a Large Reference Lab in the US

By analyzing COVID-19 sequential COVID-19 test results of patients across the United States, we herein attempt to quantify some of the observations we've made around long-term infection (and false-positive rates), as well as provide observations on the uncertainty of sampling variability and ot...

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Main Authors: Adam Sullivan, David Alfego, Brian Poirier, Jonathan Williams, Dorothy Adcock, Stan Letovsky
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-05-01
Series:Frontiers in Public Health
Subjects:
PCR
Online Access:https://www.frontiersin.org/articles/10.3389/fpubh.2021.679012/full
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spelling doaj-1e51a2e7fe274e189548e7dfbd87d56a2021-05-31T07:09:41ZengFrontiers Media S.A.Frontiers in Public Health2296-25652021-05-01910.3389/fpubh.2021.679012679012Follow-Up SARS-CoV-2 PCR Testing Outcomes From a Large Reference Lab in the USAdam SullivanDavid AlfegoBrian PoirierJonathan WilliamsDorothy AdcockStan LetovskyBy analyzing COVID-19 sequential COVID-19 test results of patients across the United States, we herein attempt to quantify some of the observations we've made around long-term infection (and false-positive rates), as well as provide observations on the uncertainty of sampling variability and other dynamics of COVID-19 infection in the United States. Retrospective cohort study of a registry of RT-PCR testing results for all patients tested at any of the reference labs operated by Labcorp® including both positive, negative, and inconclusive results, from March 1, 2020 to January 28, 2021, including patients from all 50 states and outlying US territories. The study included 22 million patients with RT-PCR qualitative test results for SARS-CoV-2, of which 3.9 million had more than one test at Labcorp. We observed a minuscule <0.1% basal positive rate for follow up tests >115 days, which could account for false positives, long-haulers, and/or reinfection but is indistinguishable in the data. In observing repeat-testing, for patients who have a second test after a first RT-PCR, 30% across the cohort tested negative on the second test. For patients who test positive first and subsequently negative within 96 h (40% of positive test results), 18% of tests will subsequently test positive within another 96-h span. For those who first test negative and then positive within 96 h (2.3% of negative tests), 56% will test negative after a third and subsequent 96-h period. The sudden changes in RT-PCR test results for SARS-CoV-2 from this large cohort study suggest that negative test results during active infection or exposure can change rapidly within just days or hours. We also demonstrate that there does not appear to be a basal false positive rate among patients who test positive >115 days after their first RT-PCR positive test while failing to observe any evidence of widespread reinfection.https://www.frontiersin.org/articles/10.3389/fpubh.2021.679012/fullCOVID-19laboratoryrepeat infectionPCRreal world data
collection DOAJ
language English
format Article
sources DOAJ
author Adam Sullivan
David Alfego
Brian Poirier
Jonathan Williams
Dorothy Adcock
Stan Letovsky
spellingShingle Adam Sullivan
David Alfego
Brian Poirier
Jonathan Williams
Dorothy Adcock
Stan Letovsky
Follow-Up SARS-CoV-2 PCR Testing Outcomes From a Large Reference Lab in the US
Frontiers in Public Health
COVID-19
laboratory
repeat infection
PCR
real world data
author_facet Adam Sullivan
David Alfego
Brian Poirier
Jonathan Williams
Dorothy Adcock
Stan Letovsky
author_sort Adam Sullivan
title Follow-Up SARS-CoV-2 PCR Testing Outcomes From a Large Reference Lab in the US
title_short Follow-Up SARS-CoV-2 PCR Testing Outcomes From a Large Reference Lab in the US
title_full Follow-Up SARS-CoV-2 PCR Testing Outcomes From a Large Reference Lab in the US
title_fullStr Follow-Up SARS-CoV-2 PCR Testing Outcomes From a Large Reference Lab in the US
title_full_unstemmed Follow-Up SARS-CoV-2 PCR Testing Outcomes From a Large Reference Lab in the US
title_sort follow-up sars-cov-2 pcr testing outcomes from a large reference lab in the us
publisher Frontiers Media S.A.
series Frontiers in Public Health
issn 2296-2565
publishDate 2021-05-01
description By analyzing COVID-19 sequential COVID-19 test results of patients across the United States, we herein attempt to quantify some of the observations we've made around long-term infection (and false-positive rates), as well as provide observations on the uncertainty of sampling variability and other dynamics of COVID-19 infection in the United States. Retrospective cohort study of a registry of RT-PCR testing results for all patients tested at any of the reference labs operated by Labcorp® including both positive, negative, and inconclusive results, from March 1, 2020 to January 28, 2021, including patients from all 50 states and outlying US territories. The study included 22 million patients with RT-PCR qualitative test results for SARS-CoV-2, of which 3.9 million had more than one test at Labcorp. We observed a minuscule <0.1% basal positive rate for follow up tests >115 days, which could account for false positives, long-haulers, and/or reinfection but is indistinguishable in the data. In observing repeat-testing, for patients who have a second test after a first RT-PCR, 30% across the cohort tested negative on the second test. For patients who test positive first and subsequently negative within 96 h (40% of positive test results), 18% of tests will subsequently test positive within another 96-h span. For those who first test negative and then positive within 96 h (2.3% of negative tests), 56% will test negative after a third and subsequent 96-h period. The sudden changes in RT-PCR test results for SARS-CoV-2 from this large cohort study suggest that negative test results during active infection or exposure can change rapidly within just days or hours. We also demonstrate that there does not appear to be a basal false positive rate among patients who test positive >115 days after their first RT-PCR positive test while failing to observe any evidence of widespread reinfection.
topic COVID-19
laboratory
repeat infection
PCR
real world data
url https://www.frontiersin.org/articles/10.3389/fpubh.2021.679012/full
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