Acquired AmpC β-Lactamases among <i>Enterobacteriaceae</i> from Healthy Humans and Animals, Food, Aquatic and Trout Aquaculture Environments in Portugal

We aimed to investigate the occurrence of acquired AmpC β-lactamases (qAmpC), and characterize qAmpC-producing <i>Enterobacteriaceae</i> from different non-clinical environments in Portugal. We analysed 880 <i>Enterobacteriaceae</i> resistant to third-generation cephalosporin...

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Main Authors: Teresa Gonçalves Ribeiro, Ângela Novais, Elisabete Machado, Luísa Peixe
Format: Article
Language:English
Published: MDPI AG 2020-04-01
Series:Pathogens
Subjects:
Online Access:https://www.mdpi.com/2076-0817/9/4/273
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spelling doaj-1d5ff8a869ef4809a1e0c8aa51382a9b2020-11-25T02:51:09ZengMDPI AGPathogens2076-08172020-04-01927327310.3390/pathogens9040273Acquired AmpC β-Lactamases among <i>Enterobacteriaceae</i> from Healthy Humans and Animals, Food, Aquatic and Trout Aquaculture Environments in PortugalTeresa Gonçalves Ribeiro0Ângela Novais1Elisabete Machado2Luísa Peixe3UCIBIO-REQUIMTE, Laboratory of Microbiology, Faculty of Pharmacy, University of Porto, 4050-313 Porto, PortugalUCIBIO-REQUIMTE, Laboratory of Microbiology, Faculty of Pharmacy, University of Porto, 4050-313 Porto, PortugalUCIBIO-REQUIMTE, Laboratory of Microbiology, Faculty of Pharmacy, University of Porto, 4050-313 Porto, PortugalUCIBIO-REQUIMTE, Laboratory of Microbiology, Faculty of Pharmacy, University of Porto, 4050-313 Porto, PortugalWe aimed to investigate the occurrence of acquired AmpC β-lactamases (qAmpC), and characterize qAmpC-producing <i>Enterobacteriaceae</i> from different non-clinical environments in Portugal. We analysed 880 <i>Enterobacteriaceae</i> resistant to third-generation cephalosporins recovered from 632 non-clinical samples [healthy human and healthy animal (swine, chickens) faeces; uncooked chicken carcasses; aquatic and trout aquaculture samples]. Bacterial and qAmpC identification, antibiotic susceptibility, clonal (PFGE, MLST) and plasmid (S1-/I-<i>Ceu</i>I-PFGE, replicon typing, hybridization) analysis were performed using standard methods. The occurrence of qAmpC among <i>Enterobacteriaceae</i> from non-clinical origins was low (0.6%; n = 4/628 samples), corresponding to CMY-2-producing <i>Escherichia coli</i> from three healthy humans (HH) and one uncooked chicken carcass (UCC). We highlight a slight increase in CMY-2 human faecal carriage in the two periods sampled [1.0% in 2013–2014 versus 0% in 2001–2004], which is in accordance with the trend observed in other European countries. CMY-2-producing <i>E. coli</i> belonged to B2<sub>2</sub>-ST4953 (n = 2, HH), A<sub>0</sub>-ST665 (n = 1, HH) or A<sub>1</sub>-ST48 (n = 1, UCC) clones. <i>bla</i><sub>CMY-2</sub> was identified in non-typeable and IncA/C<sub>2</sub> plasmids. This study is one of the few providing an integrated evaluation of the qAmpC-producing <i>Enterobacteriaceae</i> occurrence, which was low, from a very large collection of different non-clinical origins. Further surveillance in contemporary collections can provide an integrated epidemiological information of potential shifts in reservoirs, transmission routes and mechanisms of dissemination of <i>bla</i><sub>qAmpC</sub> in non-clinical settings.https://www.mdpi.com/2076-0817/9/4/273CMY-2<i>Escherichia coli</i>ST48ST665plasmids
collection DOAJ
language English
format Article
sources DOAJ
author Teresa Gonçalves Ribeiro
Ângela Novais
Elisabete Machado
Luísa Peixe
spellingShingle Teresa Gonçalves Ribeiro
Ângela Novais
Elisabete Machado
Luísa Peixe
Acquired AmpC β-Lactamases among <i>Enterobacteriaceae</i> from Healthy Humans and Animals, Food, Aquatic and Trout Aquaculture Environments in Portugal
Pathogens
CMY-2
<i>Escherichia coli</i>
ST48
ST665
plasmids
author_facet Teresa Gonçalves Ribeiro
Ângela Novais
Elisabete Machado
Luísa Peixe
author_sort Teresa Gonçalves Ribeiro
title Acquired AmpC β-Lactamases among <i>Enterobacteriaceae</i> from Healthy Humans and Animals, Food, Aquatic and Trout Aquaculture Environments in Portugal
title_short Acquired AmpC β-Lactamases among <i>Enterobacteriaceae</i> from Healthy Humans and Animals, Food, Aquatic and Trout Aquaculture Environments in Portugal
title_full Acquired AmpC β-Lactamases among <i>Enterobacteriaceae</i> from Healthy Humans and Animals, Food, Aquatic and Trout Aquaculture Environments in Portugal
title_fullStr Acquired AmpC β-Lactamases among <i>Enterobacteriaceae</i> from Healthy Humans and Animals, Food, Aquatic and Trout Aquaculture Environments in Portugal
title_full_unstemmed Acquired AmpC β-Lactamases among <i>Enterobacteriaceae</i> from Healthy Humans and Animals, Food, Aquatic and Trout Aquaculture Environments in Portugal
title_sort acquired ampc β-lactamases among <i>enterobacteriaceae</i> from healthy humans and animals, food, aquatic and trout aquaculture environments in portugal
publisher MDPI AG
series Pathogens
issn 2076-0817
publishDate 2020-04-01
description We aimed to investigate the occurrence of acquired AmpC β-lactamases (qAmpC), and characterize qAmpC-producing <i>Enterobacteriaceae</i> from different non-clinical environments in Portugal. We analysed 880 <i>Enterobacteriaceae</i> resistant to third-generation cephalosporins recovered from 632 non-clinical samples [healthy human and healthy animal (swine, chickens) faeces; uncooked chicken carcasses; aquatic and trout aquaculture samples]. Bacterial and qAmpC identification, antibiotic susceptibility, clonal (PFGE, MLST) and plasmid (S1-/I-<i>Ceu</i>I-PFGE, replicon typing, hybridization) analysis were performed using standard methods. The occurrence of qAmpC among <i>Enterobacteriaceae</i> from non-clinical origins was low (0.6%; n = 4/628 samples), corresponding to CMY-2-producing <i>Escherichia coli</i> from three healthy humans (HH) and one uncooked chicken carcass (UCC). We highlight a slight increase in CMY-2 human faecal carriage in the two periods sampled [1.0% in 2013–2014 versus 0% in 2001–2004], which is in accordance with the trend observed in other European countries. CMY-2-producing <i>E. coli</i> belonged to B2<sub>2</sub>-ST4953 (n = 2, HH), A<sub>0</sub>-ST665 (n = 1, HH) or A<sub>1</sub>-ST48 (n = 1, UCC) clones. <i>bla</i><sub>CMY-2</sub> was identified in non-typeable and IncA/C<sub>2</sub> plasmids. This study is one of the few providing an integrated evaluation of the qAmpC-producing <i>Enterobacteriaceae</i> occurrence, which was low, from a very large collection of different non-clinical origins. Further surveillance in contemporary collections can provide an integrated epidemiological information of potential shifts in reservoirs, transmission routes and mechanisms of dissemination of <i>bla</i><sub>qAmpC</sub> in non-clinical settings.
topic CMY-2
<i>Escherichia coli</i>
ST48
ST665
plasmids
url https://www.mdpi.com/2076-0817/9/4/273
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