Tumor Immune Microenvironment Landscape in Glioma Identifies a Prognostic and Immunotherapeutic Signature

The tumor immune microenvironment (TIME) has been recognized to be associated with sensitivity to immunotherapy and patient prognosis. Recent research demonstrates that assessing the TIME patterns on large-scale samples will expand insights into TIME and will provide guidance to formulate immunother...

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Main Authors: Chunyu Zhang, Lirui Guo, Zhongzhou Su, Na Luo, Yinqiu Tan, Pengfei Xu, Liguo Ye, Shiao Tong, Haitao Liu, Xiaobin Li, Qianxue Chen, Daofeng Tian
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-09-01
Series:Frontiers in Cell and Developmental Biology
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fcell.2021.717601/full
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spelling doaj-1cb7a98842f14f39956a9887f10350aa2021-09-28T14:09:10ZengFrontiers Media S.A.Frontiers in Cell and Developmental Biology2296-634X2021-09-01910.3389/fcell.2021.717601717601Tumor Immune Microenvironment Landscape in Glioma Identifies a Prognostic and Immunotherapeutic SignatureChunyu Zhang0Lirui Guo1Zhongzhou Su2Na Luo3Na Luo4Yinqiu Tan5Pengfei Xu6Liguo Ye7Shiao Tong8Haitao Liu9Xiaobin Li10Qianxue Chen11Daofeng Tian12Department of Neurosurgery, Wuhan University, Renmin Hospital, Wuhan, ChinaDepartment of Neurosurgery, Wuhan University, Renmin Hospital, Wuhan, ChinaDepartment of Neurosurgery, Huzhou Central Hospital, Affiliated Central Hospital Huzhou University, Huzhou, ChinaPeking University China-Japan Friendship School of Clinical Medicine, Beijing, ChinaDepartment of Neurosurgery, China-Japan Friendship Hospital, Beijing, ChinaDepartment of Neurosurgery, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, ChinaSun Yat-sen University, The Seventh Affiliated Hospital, Shenzhen, ChinaDepartment of Neurosurgery, Wuhan University, Renmin Hospital, Wuhan, ChinaDepartment of Neurosurgery, Wuhan University, Renmin Hospital, Wuhan, ChinaDepartment of Cardiothoracic Surgery, Jiaxing University, The First Affiliated Hospital, Jiaxing, ChinaDepartment of Neurosurgery, Huzhou Central Hospital, Affiliated Central Hospital Huzhou University, Huzhou, ChinaDepartment of Neurosurgery, Wuhan University, Renmin Hospital, Wuhan, ChinaDepartment of Neurosurgery, Wuhan University, Renmin Hospital, Wuhan, ChinaThe tumor immune microenvironment (TIME) has been recognized to be associated with sensitivity to immunotherapy and patient prognosis. Recent research demonstrates that assessing the TIME patterns on large-scale samples will expand insights into TIME and will provide guidance to formulate immunotherapy strategies for tumors. However, until now, thorough research has not yet been reported on the immune infiltration landscape of glioma. Herein, the CIBERSORT algorithm was used to unveil the TIME landscape of 1,975 glioma observations. Three TIME subtypes were established, and the TIMEscore was calculated by least absolute shrinkage and selection operator (LASSO)–Cox analysis. The high TIMEscore was distinguished by an elevated tumor mutation burden (TMB) and activation of immune-related biological process, such as IL6-JAK-STAT3 signaling and interferon gamma (IFN-γ) response, which may demonstrate that the patients with high TIMEscore were more sensitive to immunotherapy. Multivariate analysis revealed that the TIMEscore could strongly and independently predict the prognosis of gliomas [Chinese Glioma Genome Atlas (CGGA) cohort: hazard ratio (HR): 2.134, p < 0.001; Gravendeel cohort: HR: 1.872, p < 0.001; Kamoun cohort: HR: 1.705, p < 0.001; The Cancer Genome Atlas (TCGA) cohort: HR: 2.033, p < 0.001; the combined cohort: HR: 1.626, p < 0.001], and survival advantage was evident among those who received chemotherapy. Finally, we validated the performance of the signature in human tissues from Wuhan University (WHU) dataset (HR: 15.090, p = 0.008). Our research suggested that the TIMEscore could be applied as an effective predictor for adjuvant therapy and prognosis assessment.https://www.frontiersin.org/articles/10.3389/fcell.2021.717601/fullgliomaTIME landscapeprognosisCIBERSORTimmune
collection DOAJ
language English
format Article
sources DOAJ
author Chunyu Zhang
Lirui Guo
Zhongzhou Su
Na Luo
Na Luo
Yinqiu Tan
Pengfei Xu
Liguo Ye
Shiao Tong
Haitao Liu
Xiaobin Li
Qianxue Chen
Daofeng Tian
spellingShingle Chunyu Zhang
Lirui Guo
Zhongzhou Su
Na Luo
Na Luo
Yinqiu Tan
Pengfei Xu
Liguo Ye
Shiao Tong
Haitao Liu
Xiaobin Li
Qianxue Chen
Daofeng Tian
Tumor Immune Microenvironment Landscape in Glioma Identifies a Prognostic and Immunotherapeutic Signature
Frontiers in Cell and Developmental Biology
glioma
TIME landscape
prognosis
CIBERSORT
immune
author_facet Chunyu Zhang
Lirui Guo
Zhongzhou Su
Na Luo
Na Luo
Yinqiu Tan
Pengfei Xu
Liguo Ye
Shiao Tong
Haitao Liu
Xiaobin Li
Qianxue Chen
Daofeng Tian
author_sort Chunyu Zhang
title Tumor Immune Microenvironment Landscape in Glioma Identifies a Prognostic and Immunotherapeutic Signature
title_short Tumor Immune Microenvironment Landscape in Glioma Identifies a Prognostic and Immunotherapeutic Signature
title_full Tumor Immune Microenvironment Landscape in Glioma Identifies a Prognostic and Immunotherapeutic Signature
title_fullStr Tumor Immune Microenvironment Landscape in Glioma Identifies a Prognostic and Immunotherapeutic Signature
title_full_unstemmed Tumor Immune Microenvironment Landscape in Glioma Identifies a Prognostic and Immunotherapeutic Signature
title_sort tumor immune microenvironment landscape in glioma identifies a prognostic and immunotherapeutic signature
publisher Frontiers Media S.A.
series Frontiers in Cell and Developmental Biology
issn 2296-634X
publishDate 2021-09-01
description The tumor immune microenvironment (TIME) has been recognized to be associated with sensitivity to immunotherapy and patient prognosis. Recent research demonstrates that assessing the TIME patterns on large-scale samples will expand insights into TIME and will provide guidance to formulate immunotherapy strategies for tumors. However, until now, thorough research has not yet been reported on the immune infiltration landscape of glioma. Herein, the CIBERSORT algorithm was used to unveil the TIME landscape of 1,975 glioma observations. Three TIME subtypes were established, and the TIMEscore was calculated by least absolute shrinkage and selection operator (LASSO)–Cox analysis. The high TIMEscore was distinguished by an elevated tumor mutation burden (TMB) and activation of immune-related biological process, such as IL6-JAK-STAT3 signaling and interferon gamma (IFN-γ) response, which may demonstrate that the patients with high TIMEscore were more sensitive to immunotherapy. Multivariate analysis revealed that the TIMEscore could strongly and independently predict the prognosis of gliomas [Chinese Glioma Genome Atlas (CGGA) cohort: hazard ratio (HR): 2.134, p < 0.001; Gravendeel cohort: HR: 1.872, p < 0.001; Kamoun cohort: HR: 1.705, p < 0.001; The Cancer Genome Atlas (TCGA) cohort: HR: 2.033, p < 0.001; the combined cohort: HR: 1.626, p < 0.001], and survival advantage was evident among those who received chemotherapy. Finally, we validated the performance of the signature in human tissues from Wuhan University (WHU) dataset (HR: 15.090, p = 0.008). Our research suggested that the TIMEscore could be applied as an effective predictor for adjuvant therapy and prognosis assessment.
topic glioma
TIME landscape
prognosis
CIBERSORT
immune
url https://www.frontiersin.org/articles/10.3389/fcell.2021.717601/full
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