Tumor Immune Microenvironment Landscape in Glioma Identifies a Prognostic and Immunotherapeutic Signature
The tumor immune microenvironment (TIME) has been recognized to be associated with sensitivity to immunotherapy and patient prognosis. Recent research demonstrates that assessing the TIME patterns on large-scale samples will expand insights into TIME and will provide guidance to formulate immunother...
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doaj-1cb7a98842f14f39956a9887f10350aa2021-09-28T14:09:10ZengFrontiers Media S.A.Frontiers in Cell and Developmental Biology2296-634X2021-09-01910.3389/fcell.2021.717601717601Tumor Immune Microenvironment Landscape in Glioma Identifies a Prognostic and Immunotherapeutic SignatureChunyu Zhang0Lirui Guo1Zhongzhou Su2Na Luo3Na Luo4Yinqiu Tan5Pengfei Xu6Liguo Ye7Shiao Tong8Haitao Liu9Xiaobin Li10Qianxue Chen11Daofeng Tian12Department of Neurosurgery, Wuhan University, Renmin Hospital, Wuhan, ChinaDepartment of Neurosurgery, Wuhan University, Renmin Hospital, Wuhan, ChinaDepartment of Neurosurgery, Huzhou Central Hospital, Affiliated Central Hospital Huzhou University, Huzhou, ChinaPeking University China-Japan Friendship School of Clinical Medicine, Beijing, ChinaDepartment of Neurosurgery, China-Japan Friendship Hospital, Beijing, ChinaDepartment of Neurosurgery, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, ChinaSun Yat-sen University, The Seventh Affiliated Hospital, Shenzhen, ChinaDepartment of Neurosurgery, Wuhan University, Renmin Hospital, Wuhan, ChinaDepartment of Neurosurgery, Wuhan University, Renmin Hospital, Wuhan, ChinaDepartment of Cardiothoracic Surgery, Jiaxing University, The First Affiliated Hospital, Jiaxing, ChinaDepartment of Neurosurgery, Huzhou Central Hospital, Affiliated Central Hospital Huzhou University, Huzhou, ChinaDepartment of Neurosurgery, Wuhan University, Renmin Hospital, Wuhan, ChinaDepartment of Neurosurgery, Wuhan University, Renmin Hospital, Wuhan, ChinaThe tumor immune microenvironment (TIME) has been recognized to be associated with sensitivity to immunotherapy and patient prognosis. Recent research demonstrates that assessing the TIME patterns on large-scale samples will expand insights into TIME and will provide guidance to formulate immunotherapy strategies for tumors. However, until now, thorough research has not yet been reported on the immune infiltration landscape of glioma. Herein, the CIBERSORT algorithm was used to unveil the TIME landscape of 1,975 glioma observations. Three TIME subtypes were established, and the TIMEscore was calculated by least absolute shrinkage and selection operator (LASSO)–Cox analysis. The high TIMEscore was distinguished by an elevated tumor mutation burden (TMB) and activation of immune-related biological process, such as IL6-JAK-STAT3 signaling and interferon gamma (IFN-γ) response, which may demonstrate that the patients with high TIMEscore were more sensitive to immunotherapy. Multivariate analysis revealed that the TIMEscore could strongly and independently predict the prognosis of gliomas [Chinese Glioma Genome Atlas (CGGA) cohort: hazard ratio (HR): 2.134, p < 0.001; Gravendeel cohort: HR: 1.872, p < 0.001; Kamoun cohort: HR: 1.705, p < 0.001; The Cancer Genome Atlas (TCGA) cohort: HR: 2.033, p < 0.001; the combined cohort: HR: 1.626, p < 0.001], and survival advantage was evident among those who received chemotherapy. Finally, we validated the performance of the signature in human tissues from Wuhan University (WHU) dataset (HR: 15.090, p = 0.008). Our research suggested that the TIMEscore could be applied as an effective predictor for adjuvant therapy and prognosis assessment.https://www.frontiersin.org/articles/10.3389/fcell.2021.717601/fullgliomaTIME landscapeprognosisCIBERSORTimmune |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Chunyu Zhang Lirui Guo Zhongzhou Su Na Luo Na Luo Yinqiu Tan Pengfei Xu Liguo Ye Shiao Tong Haitao Liu Xiaobin Li Qianxue Chen Daofeng Tian |
spellingShingle |
Chunyu Zhang Lirui Guo Zhongzhou Su Na Luo Na Luo Yinqiu Tan Pengfei Xu Liguo Ye Shiao Tong Haitao Liu Xiaobin Li Qianxue Chen Daofeng Tian Tumor Immune Microenvironment Landscape in Glioma Identifies a Prognostic and Immunotherapeutic Signature Frontiers in Cell and Developmental Biology glioma TIME landscape prognosis CIBERSORT immune |
author_facet |
Chunyu Zhang Lirui Guo Zhongzhou Su Na Luo Na Luo Yinqiu Tan Pengfei Xu Liguo Ye Shiao Tong Haitao Liu Xiaobin Li Qianxue Chen Daofeng Tian |
author_sort |
Chunyu Zhang |
title |
Tumor Immune Microenvironment Landscape in Glioma Identifies a Prognostic and Immunotherapeutic Signature |
title_short |
Tumor Immune Microenvironment Landscape in Glioma Identifies a Prognostic and Immunotherapeutic Signature |
title_full |
Tumor Immune Microenvironment Landscape in Glioma Identifies a Prognostic and Immunotherapeutic Signature |
title_fullStr |
Tumor Immune Microenvironment Landscape in Glioma Identifies a Prognostic and Immunotherapeutic Signature |
title_full_unstemmed |
Tumor Immune Microenvironment Landscape in Glioma Identifies a Prognostic and Immunotherapeutic Signature |
title_sort |
tumor immune microenvironment landscape in glioma identifies a prognostic and immunotherapeutic signature |
publisher |
Frontiers Media S.A. |
series |
Frontiers in Cell and Developmental Biology |
issn |
2296-634X |
publishDate |
2021-09-01 |
description |
The tumor immune microenvironment (TIME) has been recognized to be associated with sensitivity to immunotherapy and patient prognosis. Recent research demonstrates that assessing the TIME patterns on large-scale samples will expand insights into TIME and will provide guidance to formulate immunotherapy strategies for tumors. However, until now, thorough research has not yet been reported on the immune infiltration landscape of glioma. Herein, the CIBERSORT algorithm was used to unveil the TIME landscape of 1,975 glioma observations. Three TIME subtypes were established, and the TIMEscore was calculated by least absolute shrinkage and selection operator (LASSO)–Cox analysis. The high TIMEscore was distinguished by an elevated tumor mutation burden (TMB) and activation of immune-related biological process, such as IL6-JAK-STAT3 signaling and interferon gamma (IFN-γ) response, which may demonstrate that the patients with high TIMEscore were more sensitive to immunotherapy. Multivariate analysis revealed that the TIMEscore could strongly and independently predict the prognosis of gliomas [Chinese Glioma Genome Atlas (CGGA) cohort: hazard ratio (HR): 2.134, p < 0.001; Gravendeel cohort: HR: 1.872, p < 0.001; Kamoun cohort: HR: 1.705, p < 0.001; The Cancer Genome Atlas (TCGA) cohort: HR: 2.033, p < 0.001; the combined cohort: HR: 1.626, p < 0.001], and survival advantage was evident among those who received chemotherapy. Finally, we validated the performance of the signature in human tissues from Wuhan University (WHU) dataset (HR: 15.090, p = 0.008). Our research suggested that the TIMEscore could be applied as an effective predictor for adjuvant therapy and prognosis assessment. |
topic |
glioma TIME landscape prognosis CIBERSORT immune |
url |
https://www.frontiersin.org/articles/10.3389/fcell.2021.717601/full |
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