Modern Trends in Plant Genome Editing: An Inclusive Review of the CRISPR/Cas9 Toolbox

Increasing agricultural productivity via modern breeding strategies is of prime interest to attain global food security. An array of biotic and abiotic stressors affect productivity as well as the quality of crop plants, and it is a primary need to develop crops with improved adaptability, high prod...

Full description

Bibliographic Details
Main Authors: Ali Razzaq, Fozia Saleem, Mehak Kanwal, Ghulam Mustafa, Sumaira Yousaf, Hafiz Muhammad Imran Arshad, Muhammad Khalid Hameed, Muhammad Sarwar Khan, Faiz Ahmad Joyia
Format: Article
Language:English
Published: MDPI AG 2019-08-01
Series:International Journal of Molecular Sciences
Subjects:
ZFN
Online Access:https://www.mdpi.com/1422-0067/20/16/4045
id doaj-1c6105fb5dcb41c9bf9cc6f7e4b85acd
record_format Article
spelling doaj-1c6105fb5dcb41c9bf9cc6f7e4b85acd2020-11-25T00:28:00ZengMDPI AGInternational Journal of Molecular Sciences1422-00672019-08-012016404510.3390/ijms20164045ijms20164045Modern Trends in Plant Genome Editing: An Inclusive Review of the CRISPR/Cas9 ToolboxAli Razzaq0Fozia Saleem1Mehak Kanwal2Ghulam Mustafa3Sumaira Yousaf4Hafiz Muhammad Imran Arshad5Muhammad Khalid Hameed6Muhammad Sarwar Khan7Faiz Ahmad Joyia8Centre of Agricultural Biochemistry and Biotechnology (CABB), University of Agriculture, Faisalabad 38040, PakistanCentre of Agricultural Biochemistry and Biotechnology (CABB), University of Agriculture, Faisalabad 38040, PakistanNuclear Institute for Agriculture and Biology (NIAB), P.O. Box 128, Faisalabad 38000, PakistanCentre of Agricultural Biochemistry and Biotechnology (CABB), University of Agriculture, Faisalabad 38040, PakistanNuclear Institute for Agriculture and Biology (NIAB), P.O. Box 128, Faisalabad 38000, PakistanNuclear Institute for Agriculture and Biology (NIAB), P.O. Box 128, Faisalabad 38000, PakistanSchool of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, ChinaCentre of Agricultural Biochemistry and Biotechnology (CABB), University of Agriculture, Faisalabad 38040, PakistanCentre of Agricultural Biochemistry and Biotechnology (CABB), University of Agriculture, Faisalabad 38040, PakistanIncreasing agricultural productivity via modern breeding strategies is of prime interest to attain global food security. An array of biotic and abiotic stressors affect productivity as well as the quality of crop plants, and it is a primary need to develop crops with improved adaptability, high productivity, and resilience against these biotic/abiotic stressors. Conventional approaches to genetic engineering involve tedious procedures. State-of-the-art OMICS approaches reinforced with next-generation sequencing and the latest developments in genome editing tools have paved the way for targeted mutagenesis, opening new horizons for precise genome engineering. Various genome editing tools such as transcription activator-like effector nucleases (TALENs), zinc-finger nucleases (ZFNs), and meganucleases (MNs) have enabled plant scientists to manipulate desired genes in crop plants. However, these approaches are expensive and laborious involving complex procedures for successful editing. Conversely, CRISPR/Cas9 is an entrancing, easy-to-design, cost-effective, and versatile tool for precise and efficient plant genome editing. In recent years, the CRISPR/Cas9 system has emerged as a powerful tool for targeted mutagenesis, including single base substitution, multiplex gene editing, gene knockouts, and regulation of gene transcription in plants. Thus, CRISPR/Cas9-based genome editing has demonstrated great potential for crop improvement but regulation of genome-edited crops is still in its infancy. Here, we extensively reviewed the availability of CRISPR/Cas9 genome editing tools for plant biotechnologists to target desired genes and its vast applications in crop breeding research.https://www.mdpi.com/1422-0067/20/16/4045CRISPR/Cas9genome editingplant breedingmultiplex genome editingcrop improvementTALENZFNbiotic stressabiotic stress
collection DOAJ
language English
format Article
sources DOAJ
author Ali Razzaq
Fozia Saleem
Mehak Kanwal
Ghulam Mustafa
Sumaira Yousaf
Hafiz Muhammad Imran Arshad
Muhammad Khalid Hameed
Muhammad Sarwar Khan
Faiz Ahmad Joyia
spellingShingle Ali Razzaq
Fozia Saleem
Mehak Kanwal
Ghulam Mustafa
Sumaira Yousaf
Hafiz Muhammad Imran Arshad
Muhammad Khalid Hameed
Muhammad Sarwar Khan
Faiz Ahmad Joyia
Modern Trends in Plant Genome Editing: An Inclusive Review of the CRISPR/Cas9 Toolbox
International Journal of Molecular Sciences
CRISPR/Cas9
genome editing
plant breeding
multiplex genome editing
crop improvement
TALEN
ZFN
biotic stress
abiotic stress
author_facet Ali Razzaq
Fozia Saleem
Mehak Kanwal
Ghulam Mustafa
Sumaira Yousaf
Hafiz Muhammad Imran Arshad
Muhammad Khalid Hameed
Muhammad Sarwar Khan
Faiz Ahmad Joyia
author_sort Ali Razzaq
title Modern Trends in Plant Genome Editing: An Inclusive Review of the CRISPR/Cas9 Toolbox
title_short Modern Trends in Plant Genome Editing: An Inclusive Review of the CRISPR/Cas9 Toolbox
title_full Modern Trends in Plant Genome Editing: An Inclusive Review of the CRISPR/Cas9 Toolbox
title_fullStr Modern Trends in Plant Genome Editing: An Inclusive Review of the CRISPR/Cas9 Toolbox
title_full_unstemmed Modern Trends in Plant Genome Editing: An Inclusive Review of the CRISPR/Cas9 Toolbox
title_sort modern trends in plant genome editing: an inclusive review of the crispr/cas9 toolbox
publisher MDPI AG
series International Journal of Molecular Sciences
issn 1422-0067
publishDate 2019-08-01
description Increasing agricultural productivity via modern breeding strategies is of prime interest to attain global food security. An array of biotic and abiotic stressors affect productivity as well as the quality of crop plants, and it is a primary need to develop crops with improved adaptability, high productivity, and resilience against these biotic/abiotic stressors. Conventional approaches to genetic engineering involve tedious procedures. State-of-the-art OMICS approaches reinforced with next-generation sequencing and the latest developments in genome editing tools have paved the way for targeted mutagenesis, opening new horizons for precise genome engineering. Various genome editing tools such as transcription activator-like effector nucleases (TALENs), zinc-finger nucleases (ZFNs), and meganucleases (MNs) have enabled plant scientists to manipulate desired genes in crop plants. However, these approaches are expensive and laborious involving complex procedures for successful editing. Conversely, CRISPR/Cas9 is an entrancing, easy-to-design, cost-effective, and versatile tool for precise and efficient plant genome editing. In recent years, the CRISPR/Cas9 system has emerged as a powerful tool for targeted mutagenesis, including single base substitution, multiplex gene editing, gene knockouts, and regulation of gene transcription in plants. Thus, CRISPR/Cas9-based genome editing has demonstrated great potential for crop improvement but regulation of genome-edited crops is still in its infancy. Here, we extensively reviewed the availability of CRISPR/Cas9 genome editing tools for plant biotechnologists to target desired genes and its vast applications in crop breeding research.
topic CRISPR/Cas9
genome editing
plant breeding
multiplex genome editing
crop improvement
TALEN
ZFN
biotic stress
abiotic stress
url https://www.mdpi.com/1422-0067/20/16/4045
work_keys_str_mv AT alirazzaq moderntrendsinplantgenomeeditinganinclusivereviewofthecrisprcas9toolbox
AT foziasaleem moderntrendsinplantgenomeeditinganinclusivereviewofthecrisprcas9toolbox
AT mehakkanwal moderntrendsinplantgenomeeditinganinclusivereviewofthecrisprcas9toolbox
AT ghulammustafa moderntrendsinplantgenomeeditinganinclusivereviewofthecrisprcas9toolbox
AT sumairayousaf moderntrendsinplantgenomeeditinganinclusivereviewofthecrisprcas9toolbox
AT hafizmuhammadimranarshad moderntrendsinplantgenomeeditinganinclusivereviewofthecrisprcas9toolbox
AT muhammadkhalidhameed moderntrendsinplantgenomeeditinganinclusivereviewofthecrisprcas9toolbox
AT muhammadsarwarkhan moderntrendsinplantgenomeeditinganinclusivereviewofthecrisprcas9toolbox
AT faizahmadjoyia moderntrendsinplantgenomeeditinganinclusivereviewofthecrisprcas9toolbox
_version_ 1725337359006826496