Identification of Circular RNAs Regulating Islet β-Cell Autophagy in Type 2 Diabetes Mellitus
This study is to identify the circular RNA (circRNA) expression profile that is functionally related to pancreatic islet β-cell autophagy and their potential regulation mechanisms in type 2 diabetes mellitus (T2DM). T2DM rat model was constructed by administration of high-fat and high-sugar diet. β-...
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Online Access: | http://dx.doi.org/10.1155/2019/4128315 |
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doaj-1c5148666a2f4f648da66fbaaec92b862020-11-24T21:50:44ZengHindawi LimitedBioMed Research International2314-61332314-61412019-01-01201910.1155/2019/41283154128315Identification of Circular RNAs Regulating Islet β-Cell Autophagy in Type 2 Diabetes MellitusChao Bai0Wenwen Yang1Yao Lu2Wei Wei3Zongbao Li4Li Zhang5Department of Vascular Thyroid Surgery, First Hospital Affiliated to Xinjiang Medical University, Urumqi 830054, ChinaDepartment of Endocrinology, Second Hospital Affiliated to Xinjiang Medical University, Urumqi 830063, ChinaDepartment of Endocrinology, Second Hospital Affiliated to Xinjiang Medical University, Urumqi 830063, ChinaDepartment of Endocrinology, Second Hospital Affiliated to Xinjiang Medical University, Urumqi 830063, ChinaDepartment of Endocrinology, Sanya Central Hospital, Sanya 572000, ChinaDepartment of Endocrinology, Sanya Central Hospital, Sanya 572000, ChinaThis study is to identify the circular RNA (circRNA) expression profile that is functionally related to pancreatic islet β-cell autophagy and their potential regulation mechanisms in type 2 diabetes mellitus (T2DM). T2DM rat model was constructed by administration of high-fat and high-sugar diet. β-cells were isolated from islets by flow cytometry. CircRNA expression profile in β-cells was detected by circRNA microarrays, and the differentially expressed circRNAs were identified and validated by qRT-PCR. MicroRNA (miRNA) target prediction software and multiple bioinformatic approaches were used to construct a map of circRNA-miRNA interactions for the differentially expressed circRNAs. A total of 825 differentially expressed circular transcripts were identified in T2DM rats compared with control rats, among which 388 were upregulated and 437 were downregulated. Ten circRNAs were identified to have significant differences by qRT-PCR. GO analysis enriched terms such as organelle membrane and protein binding and the top enriched pathways for the circRNAs included MAPK signaling pathway. The differentially expressed circRNAs might involve in MAPK signaling pathway, apoptosis, and Ras signaling pathway. We speculate that these circRNAs, especially rno_circRNA_008565, can regulate the autophagy of islet β-cells via interactions with miRNA. Dysregulation of several circRNAs may play a role in T2DM development, and rno_circRNA_008565 may be a potential regulator of β-cell autophagy.http://dx.doi.org/10.1155/2019/4128315 |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Chao Bai Wenwen Yang Yao Lu Wei Wei Zongbao Li Li Zhang |
spellingShingle |
Chao Bai Wenwen Yang Yao Lu Wei Wei Zongbao Li Li Zhang Identification of Circular RNAs Regulating Islet β-Cell Autophagy in Type 2 Diabetes Mellitus BioMed Research International |
author_facet |
Chao Bai Wenwen Yang Yao Lu Wei Wei Zongbao Li Li Zhang |
author_sort |
Chao Bai |
title |
Identification of Circular RNAs Regulating Islet β-Cell Autophagy in Type 2 Diabetes Mellitus |
title_short |
Identification of Circular RNAs Regulating Islet β-Cell Autophagy in Type 2 Diabetes Mellitus |
title_full |
Identification of Circular RNAs Regulating Islet β-Cell Autophagy in Type 2 Diabetes Mellitus |
title_fullStr |
Identification of Circular RNAs Regulating Islet β-Cell Autophagy in Type 2 Diabetes Mellitus |
title_full_unstemmed |
Identification of Circular RNAs Regulating Islet β-Cell Autophagy in Type 2 Diabetes Mellitus |
title_sort |
identification of circular rnas regulating islet β-cell autophagy in type 2 diabetes mellitus |
publisher |
Hindawi Limited |
series |
BioMed Research International |
issn |
2314-6133 2314-6141 |
publishDate |
2019-01-01 |
description |
This study is to identify the circular RNA (circRNA) expression profile that is functionally related to pancreatic islet β-cell autophagy and their potential regulation mechanisms in type 2 diabetes mellitus (T2DM). T2DM rat model was constructed by administration of high-fat and high-sugar diet. β-cells were isolated from islets by flow cytometry. CircRNA expression profile in β-cells was detected by circRNA microarrays, and the differentially expressed circRNAs were identified and validated by qRT-PCR. MicroRNA (miRNA) target prediction software and multiple bioinformatic approaches were used to construct a map of circRNA-miRNA interactions for the differentially expressed circRNAs. A total of 825 differentially expressed circular transcripts were identified in T2DM rats compared with control rats, among which 388 were upregulated and 437 were downregulated. Ten circRNAs were identified to have significant differences by qRT-PCR. GO analysis enriched terms such as organelle membrane and protein binding and the top enriched pathways for the circRNAs included MAPK signaling pathway. The differentially expressed circRNAs might involve in MAPK signaling pathway, apoptosis, and Ras signaling pathway. We speculate that these circRNAs, especially rno_circRNA_008565, can regulate the autophagy of islet β-cells via interactions with miRNA. Dysregulation of several circRNAs may play a role in T2DM development, and rno_circRNA_008565 may be a potential regulator of β-cell autophagy. |
url |
http://dx.doi.org/10.1155/2019/4128315 |
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