Identification of Circular RNAs Regulating Islet β-Cell Autophagy in Type 2 Diabetes Mellitus

This study is to identify the circular RNA (circRNA) expression profile that is functionally related to pancreatic islet β-cell autophagy and their potential regulation mechanisms in type 2 diabetes mellitus (T2DM). T2DM rat model was constructed by administration of high-fat and high-sugar diet. β-...

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Main Authors: Chao Bai, Wenwen Yang, Yao Lu, Wei Wei, Zongbao Li, Li Zhang
Format: Article
Language:English
Published: Hindawi Limited 2019-01-01
Series:BioMed Research International
Online Access:http://dx.doi.org/10.1155/2019/4128315
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spelling doaj-1c5148666a2f4f648da66fbaaec92b862020-11-24T21:50:44ZengHindawi LimitedBioMed Research International2314-61332314-61412019-01-01201910.1155/2019/41283154128315Identification of Circular RNAs Regulating Islet β-Cell Autophagy in Type 2 Diabetes MellitusChao Bai0Wenwen Yang1Yao Lu2Wei Wei3Zongbao Li4Li Zhang5Department of Vascular Thyroid Surgery, First Hospital Affiliated to Xinjiang Medical University, Urumqi 830054, ChinaDepartment of Endocrinology, Second Hospital Affiliated to Xinjiang Medical University, Urumqi 830063, ChinaDepartment of Endocrinology, Second Hospital Affiliated to Xinjiang Medical University, Urumqi 830063, ChinaDepartment of Endocrinology, Second Hospital Affiliated to Xinjiang Medical University, Urumqi 830063, ChinaDepartment of Endocrinology, Sanya Central Hospital, Sanya 572000, ChinaDepartment of Endocrinology, Sanya Central Hospital, Sanya 572000, ChinaThis study is to identify the circular RNA (circRNA) expression profile that is functionally related to pancreatic islet β-cell autophagy and their potential regulation mechanisms in type 2 diabetes mellitus (T2DM). T2DM rat model was constructed by administration of high-fat and high-sugar diet. β-cells were isolated from islets by flow cytometry. CircRNA expression profile in β-cells was detected by circRNA microarrays, and the differentially expressed circRNAs were identified and validated by qRT-PCR. MicroRNA (miRNA) target prediction software and multiple bioinformatic approaches were used to construct a map of circRNA-miRNA interactions for the differentially expressed circRNAs. A total of 825 differentially expressed circular transcripts were identified in T2DM rats compared with control rats, among which 388 were upregulated and 437 were downregulated. Ten circRNAs were identified to have significant differences by qRT-PCR. GO analysis enriched terms such as organelle membrane and protein binding and the top enriched pathways for the circRNAs included MAPK signaling pathway. The differentially expressed circRNAs might involve in MAPK signaling pathway, apoptosis, and Ras signaling pathway. We speculate that these circRNAs, especially rno_circRNA_008565, can regulate the autophagy of islet β-cells via interactions with miRNA. Dysregulation of several circRNAs may play a role in T2DM development, and rno_circRNA_008565 may be a potential regulator of β-cell autophagy.http://dx.doi.org/10.1155/2019/4128315
collection DOAJ
language English
format Article
sources DOAJ
author Chao Bai
Wenwen Yang
Yao Lu
Wei Wei
Zongbao Li
Li Zhang
spellingShingle Chao Bai
Wenwen Yang
Yao Lu
Wei Wei
Zongbao Li
Li Zhang
Identification of Circular RNAs Regulating Islet β-Cell Autophagy in Type 2 Diabetes Mellitus
BioMed Research International
author_facet Chao Bai
Wenwen Yang
Yao Lu
Wei Wei
Zongbao Li
Li Zhang
author_sort Chao Bai
title Identification of Circular RNAs Regulating Islet β-Cell Autophagy in Type 2 Diabetes Mellitus
title_short Identification of Circular RNAs Regulating Islet β-Cell Autophagy in Type 2 Diabetes Mellitus
title_full Identification of Circular RNAs Regulating Islet β-Cell Autophagy in Type 2 Diabetes Mellitus
title_fullStr Identification of Circular RNAs Regulating Islet β-Cell Autophagy in Type 2 Diabetes Mellitus
title_full_unstemmed Identification of Circular RNAs Regulating Islet β-Cell Autophagy in Type 2 Diabetes Mellitus
title_sort identification of circular rnas regulating islet β-cell autophagy in type 2 diabetes mellitus
publisher Hindawi Limited
series BioMed Research International
issn 2314-6133
2314-6141
publishDate 2019-01-01
description This study is to identify the circular RNA (circRNA) expression profile that is functionally related to pancreatic islet β-cell autophagy and their potential regulation mechanisms in type 2 diabetes mellitus (T2DM). T2DM rat model was constructed by administration of high-fat and high-sugar diet. β-cells were isolated from islets by flow cytometry. CircRNA expression profile in β-cells was detected by circRNA microarrays, and the differentially expressed circRNAs were identified and validated by qRT-PCR. MicroRNA (miRNA) target prediction software and multiple bioinformatic approaches were used to construct a map of circRNA-miRNA interactions for the differentially expressed circRNAs. A total of 825 differentially expressed circular transcripts were identified in T2DM rats compared with control rats, among which 388 were upregulated and 437 were downregulated. Ten circRNAs were identified to have significant differences by qRT-PCR. GO analysis enriched terms such as organelle membrane and protein binding and the top enriched pathways for the circRNAs included MAPK signaling pathway. The differentially expressed circRNAs might involve in MAPK signaling pathway, apoptosis, and Ras signaling pathway. We speculate that these circRNAs, especially rno_circRNA_008565, can regulate the autophagy of islet β-cells via interactions with miRNA. Dysregulation of several circRNAs may play a role in T2DM development, and rno_circRNA_008565 may be a potential regulator of β-cell autophagy.
url http://dx.doi.org/10.1155/2019/4128315
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