Genome-wide CRISPR screening identifies new regulators of glycoprotein secretion [version 2; peer review: 2 approved]
Background: The fundamental process of protein secretion from eukaryotic cells has been well described for many years, yet gaps in our understanding of how this process is regulated remain. Methods: With the aim of identifying novel genes involved in the secretion of glycoproteins, we used a screeni...
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doaj-19d17e7bbe744b99b8dbd241cdb38e2e2020-11-25T01:52:02ZengWellcomeWellcome Open Research2398-502X2020-01-01410.12688/wellcomeopenres.15232.217182Genome-wide CRISPR screening identifies new regulators of glycoprotein secretion [version 2; peer review: 2 approved]Stephanie Popa0Julien Villeneuve1Sarah Stewart2Esther Perez Garcia3Anna Petrunkina Harrison4Kevin Moreau5University of Cambridge Metabolic Research Laboratories, Wellcome Trust-Medical Research Council Institute of Metabolic Science, University of Cambridge, Cambridge, CB2 0QQ, UKUniversity of Cambridge Metabolic Research Laboratories, Wellcome Trust-Medical Research Council Institute of Metabolic Science, University of Cambridge, Cambridge, CB2 0QQ, UKUniversity of Cambridge Metabolic Research Laboratories, Wellcome Trust-Medical Research Council Institute of Metabolic Science, University of Cambridge, Cambridge, CB2 0QQ, UKNIHR Cambridge BRC Cell Phenotyping Hub, Department of Medicine, University of Cambridge, Cambridge, CB2 0QQ, UKNIHR Cambridge BRC Cell Phenotyping Hub, Department of Medicine, University of Cambridge, Cambridge, CB2 0QQ, UKUniversity of Cambridge Metabolic Research Laboratories, Wellcome Trust-Medical Research Council Institute of Metabolic Science, University of Cambridge, Cambridge, CB2 0QQ, UKBackground: The fundamental process of protein secretion from eukaryotic cells has been well described for many years, yet gaps in our understanding of how this process is regulated remain. Methods: With the aim of identifying novel genes involved in the secretion of glycoproteins, we used a screening pipeline consisting of a pooled genome-wide CRISPR screen, followed by secondary siRNA screening of the hits to identify and validate several novel regulators of protein secretion. Results: We present approximately 50 novel genes not previously associated with protein secretion, many of which also had an effect on the structure of the Golgi apparatus. We further studied a small selection of hits to investigate their subcellular localisation. One of these, GPR161, is a novel Golgi-resident protein that we propose maintains Golgi structure via an interaction with golgin A5. Conclusions: This study has identified new factors for protein secretion involved in Golgi homeostasis.https://wellcomeopenresearch.org/articles/4-119/v2 |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Stephanie Popa Julien Villeneuve Sarah Stewart Esther Perez Garcia Anna Petrunkina Harrison Kevin Moreau |
spellingShingle |
Stephanie Popa Julien Villeneuve Sarah Stewart Esther Perez Garcia Anna Petrunkina Harrison Kevin Moreau Genome-wide CRISPR screening identifies new regulators of glycoprotein secretion [version 2; peer review: 2 approved] Wellcome Open Research |
author_facet |
Stephanie Popa Julien Villeneuve Sarah Stewart Esther Perez Garcia Anna Petrunkina Harrison Kevin Moreau |
author_sort |
Stephanie Popa |
title |
Genome-wide CRISPR screening identifies new regulators of glycoprotein secretion [version 2; peer review: 2 approved] |
title_short |
Genome-wide CRISPR screening identifies new regulators of glycoprotein secretion [version 2; peer review: 2 approved] |
title_full |
Genome-wide CRISPR screening identifies new regulators of glycoprotein secretion [version 2; peer review: 2 approved] |
title_fullStr |
Genome-wide CRISPR screening identifies new regulators of glycoprotein secretion [version 2; peer review: 2 approved] |
title_full_unstemmed |
Genome-wide CRISPR screening identifies new regulators of glycoprotein secretion [version 2; peer review: 2 approved] |
title_sort |
genome-wide crispr screening identifies new regulators of glycoprotein secretion [version 2; peer review: 2 approved] |
publisher |
Wellcome |
series |
Wellcome Open Research |
issn |
2398-502X |
publishDate |
2020-01-01 |
description |
Background: The fundamental process of protein secretion from eukaryotic cells has been well described for many years, yet gaps in our understanding of how this process is regulated remain. Methods: With the aim of identifying novel genes involved in the secretion of glycoproteins, we used a screening pipeline consisting of a pooled genome-wide CRISPR screen, followed by secondary siRNA screening of the hits to identify and validate several novel regulators of protein secretion. Results: We present approximately 50 novel genes not previously associated with protein secretion, many of which also had an effect on the structure of the Golgi apparatus. We further studied a small selection of hits to investigate their subcellular localisation. One of these, GPR161, is a novel Golgi-resident protein that we propose maintains Golgi structure via an interaction with golgin A5. Conclusions: This study has identified new factors for protein secretion involved in Golgi homeostasis. |
url |
https://wellcomeopenresearch.org/articles/4-119/v2 |
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